BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf045g18 (1172 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055139.1| Oryza sativa (japonica cultivar-group) Os02g... 357 7e-95 emb|AJ278822.1|OSA278822 Oryza sativa mRNA for replication prote... 357 7e-95 dbj|AK103235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 7e-95 gb|AY105664.1| Zea mays PCO076382 mRNA sequence 353 1e-93 dbj|AB037145.1| Oryza sativa (japonica cultivar-group) OsRPA32 m... 349 2e-92 >ref|NM_001055139.1| Oryza sativa (japonica cultivar-group) Os02g0829100 (Os02g0829100) mRNA, complete cds Length = 1324 Score = 357 bits (180), Expect = 7e-95 Identities = 303/344 (88%) Strand = Plus / Plus Query: 258 ccggcgagaagggcgctcctttcggcatcgacggcgtcgagacagctaacattaggcttg 317 |||| |||||||||||||| |||| | ||||||||||||||||||| ||| ||||||||| Sbjct: 284 ccggggagaagggcgctcccttcgtcgtcgacggcgtcgagacagccaacgttaggcttg 343 Query: 318 tgggggtggtgaacggcaaggcggagcggacgacggatgtgtccttcacgcttgatgatg 377 |||| |||| | |||||| ||||||||| || ||||||||||||||| | || |||| Sbjct: 344 tgggattggtcagtggcaagacggagcggaacaccgatgtgtccttcacgatcgacgatg 403 Query: 378 gcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattctgctgaaactg 437 ||||||||||||||||||||||||||||||| ||||||| | | |||||||||||||| | Sbjct: 404 gcaccggccgcctcgatttcatcagatgggtcaatgatggtgctgattctgctgaaaccg 463 Query: 438 ctgttattcagaatggtatgtacgtttccgtcattggtagcctcaagggacttcaggaga 497 ||| | |||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 464 ctgctgttcagaatggaatgtatgtttctgtcattggtagcctcaaggggcttcaggaga 523 Query: 498 ggaagcgtgcaactgctttctcaatcagaccagtatctgatttcaatgaggtcacgctgc 557 |||||||||| ||||||||| | ||||| || ||| |||||| ||||||||||| |||| Sbjct: 524 ggaagcgtgctactgctttcgctatcaggcctgtaactgattataatgaggtcacactgc 583 Query: 558 atttcattcagtgcgtacgaatgcatctagagaacactaaatca 601 |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 584 atttcattcagtgcgtgcgaatgcatttagagaacaccaaatca 627 Score = 174 bits (88), Expect = 5e-40 Identities = 232/280 (82%) Strand = Plus / Plus Query: 670 tccaatggtttcagtgaatcaagcactccaacatctttgaaatccaacccggcaccagtg 729 |||||||| ||||||||| | |||||| || ||| ||||||||||||||||||||||| Sbjct: 676 tccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaacccggcaccagtg 735 Query: 730 actagtggaacaaatgaatcagagactgatttgtacacacaggtgttgaatgttttccgt 789 |||| |||||||| |||| | ||||||||| ||||| | ||| ||||||||||||| Sbjct: 736 ctcagtgtaacaaatggatcaaaaactgatttgaacacagaagtgctgaatgttttccgc 795 Query: 790 gaaccagcaaacgtcgagagcgaccatggtgtgcatattgatgaaattgccaagcgactc 849 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| || Sbjct: 796 gaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatcgtgaagcgcttc 855 Query: 850 agactaccggcgagcaagatcaaggaagctatcgagtaccatgtcgatgtcgggcatatt 909 || ||||||| | ||||||||||| |||||| || |||| | || | ||||| || Sbjct: 856 aggctaccggaggccaagatcaaggtagctattgattacctcgctgacattgggcacata 915 Query: 910 tactcaacaatcgatgattttcacttcaagtcagctttca 949 |||||||||||||| || | ||||| ||||||||| |||| Sbjct: 916 tactcaacaatcgacgagtctcactacaagtcagcgttca 955 >emb|AJ278822.1|OSA278822 Oryza sativa mRNA for replication protein A2 (RPA2 gene) Length = 1331 Score = 357 bits (180), Expect = 7e-95 Identities = 303/344 (88%) Strand = Plus / Plus Query: 258 ccggcgagaagggcgctcctttcggcatcgacggcgtcgagacagctaacattaggcttg 317 |||| |||||||||||||| |||| | ||||||||||||||||||| ||| ||||||||| Sbjct: 282 ccggggagaagggcgctcccttcgtcgtcgacggcgtcgagacagccaacgttaggcttg 341 Query: 318 tgggggtggtgaacggcaaggcggagcggacgacggatgtgtccttcacgcttgatgatg 377 |||| |||| | |||||| ||||||||| || ||||||||||||||| | || |||| Sbjct: 342 tgggattggtcagtggcaagacggagcggaacaccgatgtgtccttcacgatcgacgatg 401 Query: 378 gcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattctgctgaaactg 437 ||||||||||||||||||||||||||||||| ||||||| | | |||||||||||||| | Sbjct: 402 gcaccggccgcctcgatttcatcagatgggtcaatgatggtgctgattctgctgaaaccg 461 Query: 438 ctgttattcagaatggtatgtacgtttccgtcattggtagcctcaagggacttcaggaga 497 ||| | |||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 462 ctgctgttcagaatggaatgtatgtttctgtcattggtagcctcaaggggcttcaggaga 521 Query: 498 ggaagcgtgcaactgctttctcaatcagaccagtatctgatttcaatgaggtcacgctgc 557 |||||||||| ||||||||| | ||||| || ||| |||||| ||||||||||| |||| Sbjct: 522 ggaagcgtgctactgctttcgctatcaggcctgtaactgattataatgaggtcacactgc 581 Query: 558 atttcattcagtgcgtacgaatgcatctagagaacactaaatca 601 |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 582 atttcattcagtgcgtgcgaatgcatttagagaacaccaaatca 625 Score = 182 bits (92), Expect = 2e-42 Identities = 233/280 (83%) Strand = Plus / Plus Query: 670 tccaatggtttcagtgaatcaagcactccaacatctttgaaatccaacccggcaccagtg 729 |||||||| ||||||||| | |||||| || ||| ||||||||||||||||||||||| Sbjct: 674 tccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaacccggcaccagtg 733 Query: 730 actagtggaacaaatgaatcagagactgatttgtacacacaggtgttgaatgttttccgt 789 |||| |||||||| |||| | ||||||||| ||||| ||||| ||||||||||||| Sbjct: 734 ctcagtgtaacaaatggatcaaaaactgatttgaacacagaggtgctgaatgttttccgc 793 Query: 790 gaaccagcaaacgtcgagagcgaccatggtgtgcatattgatgaaattgccaagcgactc 849 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| || Sbjct: 794 gaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatcgtgaagcgcttc 853 Query: 850 agactaccggcgagcaagatcaaggaagctatcgagtaccatgtcgatgtcgggcatatt 909 || ||||||| | ||||||||||| |||||| || |||| | || | ||||| || Sbjct: 854 aggctaccggaggccaagatcaaggtagctattgattacctcgctgacattgggcacata 913 Query: 910 tactcaacaatcgatgattttcacttcaagtcagctttca 949 |||||||||||||| || | ||||| ||||||||| |||| Sbjct: 914 tactcaacaatcgacgagtctcactacaagtcagcgttca 953 >dbj|AK103235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123F02, full insert sequence Length = 1198 Score = 357 bits (180), Expect = 7e-95 Identities = 303/344 (88%) Strand = Plus / Plus Query: 258 ccggcgagaagggcgctcctttcggcatcgacggcgtcgagacagctaacattaggcttg 317 |||| |||||||||||||| |||| | ||||||||||||||||||| ||| ||||||||| Sbjct: 289 ccggggagaagggcgctcccttcgtcgtcgacggcgtcgagacagccaacgttaggcttg 348 Query: 318 tgggggtggtgaacggcaaggcggagcggacgacggatgtgtccttcacgcttgatgatg 377 |||| |||| | |||||| ||||||||| || ||||||||||||||| | || |||| Sbjct: 349 tgggattggtcagtggcaagacggagcggaacaccgatgtgtccttcacgatcgacgatg 408 Query: 378 gcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattctgctgaaactg 437 ||||||||||||||||||||||||||||||| ||||||| | | |||||||||||||| | Sbjct: 409 gcaccggccgcctcgatttcatcagatgggtcaatgatggtgctgattctgctgaaaccg 468 Query: 438 ctgttattcagaatggtatgtacgtttccgtcattggtagcctcaagggacttcaggaga 497 ||| | |||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 469 ctgctgttcagaatggaatgtatgtttctgtcattggtagcctcaaggggcttcaggaga 528 Query: 498 ggaagcgtgcaactgctttctcaatcagaccagtatctgatttcaatgaggtcacgctgc 557 |||||||||| ||||||||| | ||||| || ||| |||||| ||||||||||| |||| Sbjct: 529 ggaagcgtgctactgctttcgctatcaggcctgtaactgattataatgaggtcacactgc 588 Query: 558 atttcattcagtgcgtacgaatgcatctagagaacactaaatca 601 |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 589 atttcattcagtgcgtgcgaatgcatttagagaacaccaaatca 632 Score = 174 bits (88), Expect = 5e-40 Identities = 232/280 (82%) Strand = Plus / Plus Query: 670 tccaatggtttcagtgaatcaagcactccaacatctttgaaatccaacccggcaccagtg 729 |||||||| ||||||||| | |||||| || ||| ||||||||||||||||||||||| Sbjct: 681 tccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaacccggcaccagtg 740 Query: 730 actagtggaacaaatgaatcagagactgatttgtacacacaggtgttgaatgttttccgt 789 |||| |||||||| |||| | ||||||||| ||||| | ||| ||||||||||||| Sbjct: 741 ctcagtgtaacaaatggatcaaaaactgatttgaacacagaagtgctgaatgttttccgc 800 Query: 790 gaaccagcaaacgtcgagagcgaccatggtgtgcatattgatgaaattgccaagcgactc 849 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| || Sbjct: 801 gaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatcgtgaagcgcttc 860 Query: 850 agactaccggcgagcaagatcaaggaagctatcgagtaccatgtcgatgtcgggcatatt 909 || ||||||| | ||||||||||| |||||| || |||| | || | ||||| || Sbjct: 861 aggctaccggaggccaagatcaaggtagctattgattacctcgctgacattgggcacata 920 Query: 910 tactcaacaatcgatgattttcacttcaagtcagctttca 949 |||||||||||||| || | ||||| ||||||||| |||| Sbjct: 921 tactcaacaatcgacgagtctcactacaagtcagcgttca 960 >gb|AY105664.1| Zea mays PCO076382 mRNA sequence Length = 1285 Score = 353 bits (178), Expect = 1e-93 Identities = 295/334 (88%) Strand = Plus / Plus Query: 260 ggcgagaagggcgctcctttcggcatcgacggcgtcgagacagctaacattaggcttgtg 319 ||||||||||||||||| ||| | || | |||||||||| ||||||||| | |||||| Sbjct: 255 ggcgagaagggcgctccgttcatcgtcaatggcgtcgagatggctaacattcgacttgtg 314 Query: 320 ggggtggtgaacggcaaggcggagcggacgacggatgtgtccttcacgcttgatgatggc 379 ||| |||| || | ||||| |||||||||||| |||||| |||||||||| || |||||| Sbjct: 315 gggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcacgctcgacgatggc 374 Query: 380 accggccgcctcgatttcatcagatgggtgaatgatgcttcagattctgctgaaactgct 439 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 375 accggccgcctcgatttcatcagatgggtgaatgatgcttcagattcttttgaaactgct 434 Query: 440 gttattcagaatggtatgtacgtttccgtcattggtagcctcaagggacttcaggagagg 499 | ||||||||||||||||||| || | |||||||| |||||||||||||| || |||||| Sbjct: 435 gctattcagaatggtatgtacattgcggtcattggaagcctcaagggactgcaagagagg 494 Query: 500 aagcgtgcaactgctttctcaatcagaccagtatctgatttcaatgaggtcacgctgcat 559 |||||||| ||||||||||||||||| || || | |||||||||||||| ||||||||| Sbjct: 495 aagcgtgctactgctttctcaatcaggcctataaccgatttcaatgaggttacgctgcat 554 Query: 560 ttcattcagtgcgtacgaatgcatctagagaaca 593 ||||||||||| || || |||||| ||||||||| Sbjct: 555 ttcattcagtgtgttcggatgcatatagagaaca 588 >dbj|AB037145.1| Oryza sativa (japonica cultivar-group) OsRPA32 mRNA for replication protein A 30kDa, complete cds Length = 1204 Score = 349 bits (176), Expect = 2e-92 Identities = 302/344 (87%) Strand = Plus / Plus Query: 258 ccggcgagaagggcgctcctttcggcatcgacggcgtcgagacagctaacattaggcttg 317 |||| |||||||||||||| |||| | ||||||||||||||||||| ||| ||||||||| Sbjct: 280 ccggggagaagggcgctcccttcgtcgtcgacggcgtcgagacagccaacgttaggcttg 339 Query: 318 tgggggtggtgaacggcaaggcggagcggacgacggatgtgtccttcacgcttgatgatg 377 |||| |||| | |||||| ||||||||| || ||||||||||||| | | || |||| Sbjct: 340 tgggattggtcagtggcaagacggagcggaacaccgatgtgtccttcatgatcgacgatg 399 Query: 378 gcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattctgctgaaactg 437 ||||||||||||||||||||||||||||||| ||||||| | | |||||||||||||| | Sbjct: 400 gcaccggccgcctcgatttcatcagatgggtcaatgatggtgctgattctgctgaaaccg 459 Query: 438 ctgttattcagaatggtatgtacgtttccgtcattggtagcctcaagggacttcaggaga 497 ||| | |||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 460 ctgctgttcagaatggaatgtatgtttctgtcattggtagcctcaaggggcttcaggaga 519 Query: 498 ggaagcgtgcaactgctttctcaatcagaccagtatctgatttcaatgaggtcacgctgc 557 |||||||||| ||||||||| | ||||| || ||| |||||| ||||||||||| |||| Sbjct: 520 ggaagcgtgctactgctttcgctatcaggcctgtaactgattataatgaggtcacactgc 579 Query: 558 atttcattcagtgcgtacgaatgcatctagagaacactaaatca 601 |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 580 atttcattcagtgcgtgcgaatgcatttagagaacaccaaatca 623 Score = 182 bits (92), Expect = 2e-42 Identities = 233/280 (83%) Strand = Plus / Plus Query: 670 tccaatggtttcagtgaatcaagcactccaacatctttgaaatccaacccggcaccagtg 729 |||||||| ||||||||| | |||||| || ||| ||||||||||||||||||||||| Sbjct: 672 tccaatggcttcagtgaaatgaccactccgacctctgtgaaatccaacccggcaccagtg 731 Query: 730 actagtggaacaaatgaatcagagactgatttgtacacacaggtgttgaatgttttccgt 789 |||| |||||||| |||| | ||||||||| ||||| | ||| ||||||||||||| Sbjct: 732 ctcagtgtaacaaatggatcaaaaactgatttgaacacagaagtgctgaatgttttccgc 791 Query: 790 gaaccagcaaacgtcgagagcgaccatggtgtgcatattgatgaaattgccaagcgactc 849 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| ||| Sbjct: 792 gaaccagcaaacgtcgagagcgagcatggtgtgcacattgatgaaatcgtgaagcgcctc 851 Query: 850 agactaccggcgagcaagatcaaggaagctatcgagtaccatgtcgatgtcgggcatatt 909 || ||||||| | ||||||||||| |||||| || |||| | || | ||||| || Sbjct: 852 aggctaccggaggccaagatcaaggtagctattgattacctcgctgacattgggcacata 911 Query: 910 tactcaacaatcgatgattttcacttcaagtcagctttca 949 |||||||||||||| || | ||||| ||||||||| |||| Sbjct: 912 tactcaacaatcgacgagtctcactacaagtcagcgttca 951