BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf044o06 (1120 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 272 3e-69 emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388... 272 3e-69 dbj|AB071808.1| Oryza sativa (japonica cultivar-group) mRNA for ... 262 3e-66 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 236 2e-58 dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D... 236 2e-58 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 272 bits (137), Expect = 3e-69 Identities = 215/241 (89%) Strand = Plus / Plus Query: 272 gcggcgtggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagc 331 ||||||||||||||| ||||||||||||| || |||||||| || |||||| |||||||| Sbjct: 26189744 gcggcgtggcggacgagccgggtggcgcgggcggcggcgggggggaaggacaggcacagc 26189803 Query: 332 aaggtggtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcg 391 ||||||||||| | || || |||||||||||||| || |||| |||||||||||||| Sbjct: 26189804 aaggtggtgacgtcgcgggggctccgcgaccgccgggtgaggctgtcggtgccgacggcc 26189863 Query: 392 atccagttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgag 451 ||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 26189864 atcgcgttctacgacatccaggaccgcctcggcgtcgaccagccgagcaaggccatcgag 26189923 Query: 452 tggctcatccgcgccgcctcccccgccatcgacgcgctcccgtcgctggactactcgttc 511 |||||||||||||||||| | ||||||||||||||||||||||||| |||| ||| ||| Sbjct: 26189924 tggctcatccgcgccgccgcggccgccatcgacgcgctcccgtcgctcgactgctccttc 26189983 Query: 512 g 512 | Sbjct: 26189984 g 26189984 Score = 210 bits (106), Expect = 9e-51 Identities = 196/226 (86%) Strand = Plus / Minus Query: 278 tggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagcaaggtg 337 ||||||||| ||||||||||| ||| | |||||||| |||||| ||||||||||||| Sbjct: 626626 tggcggacgagccgggtggcgtgcgtggtggcgggcgagaaggacaagcacagcaaggtg 626567 Query: 338 gtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcgatccag 397 ||||| | || || |||||||||||| ||||| |||| |||||||||| ||| ||| | Sbjct: 626566 gtgacgtcgcgggggctccgcgaccgctgcgtcaggctatcggtgccgatggccatcgcg 626507 Query: 398 ttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgagtggctc 457 ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| | Sbjct: 626506 ttctacgacatccaggaccgcctcggcgtcgaccaaccaagcaaggccatcgagtggcac 626447 Query: 458 atccgcgccgcctcccccgccatcgacgcgctcccgtcgctggact 503 |||||||||||| || |||||||||||||| ||| |||||| |||| Sbjct: 626446 atccgcgccgccgccgccgccatcgacgcgttcctgtcgctcgact 626401 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 542 gccggcgaagacgccgaggtcagcacctcggagaccagcaagacctccgtgctctcgctc 601 |||| ||| ||||||||||||||||| || ||||||||||||| |||||||||||| ||| Sbjct: 26190020 gccgccgacgacgccgaggtcagcacatccgagaccagcaagagctccgtgctctccctc 26190079 Query: 602 accaacgcccccggcgacaacggc 625 ||||||||||| ||||||||||| Sbjct: 26190080 gccaacgccccctgcgacaacggc 26190103 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 968 ggcggtgctgctgctgctgctccggcgatggccaatgcggcggagcgaaggctgcagctc 1027 |||| ||||||||||||| | |||||| | |||||| | |||||| |||||||||||| Sbjct: 26190455 ggcgctgctgctgctgctccggcggcgacgaccaatggtggggagcggaggctgcagctc 26190514 Query: 1028 tgggacttcaaggaggaaaggaagatatga 1057 ||||||||||||||||| ||||||| |||| Sbjct: 26190515 tgggacttcaaggaggagaggaagacatga 26190544 >emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 272 bits (137), Expect = 3e-69 Identities = 215/241 (89%) Strand = Plus / Plus Query: 272 gcggcgtggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagc 331 ||||||||||||||| ||||||||||||| || |||||||| || |||||| |||||||| Sbjct: 79982 gcggcgtggcggacgagccgggtggcgcgggcggcggcgggggggaaggacaggcacagc 80041 Query: 332 aaggtggtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcg 391 ||||||||||| | || || |||||||||||||| || |||| |||||||||||||| Sbjct: 80042 aaggtggtgacgtcgcgggggctccgcgaccgccgggtgaggctgtcggtgccgacggcc 80101 Query: 392 atccagttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgag 451 ||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 80102 atcgcgttctacgacatccaggaccgcctcggcgtcgaccagccgagcaaggccatcgag 80161 Query: 452 tggctcatccgcgccgcctcccccgccatcgacgcgctcccgtcgctggactactcgttc 511 |||||||||||||||||| | ||||||||||||||||||||||||| |||| ||| ||| Sbjct: 80162 tggctcatccgcgccgccgcggccgccatcgacgcgctcccgtcgctcgactgctccttc 80221 Query: 512 g 512 | Sbjct: 80222 g 80222 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 542 gccggcgaagacgccgaggtcagcacctcggagaccagcaagacctccgtgctctcgctc 601 |||| ||| ||||||||||||||||| || ||||||||||||| |||||||||||| ||| Sbjct: 80258 gccgccgacgacgccgaggtcagcacatccgagaccagcaagagctccgtgctctccctc 80317 Query: 602 accaacgcccccggcgacaacggc 625 ||||||||||| ||||||||||| Sbjct: 80318 gccaacgccccctgcgacaacggc 80341 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 968 ggcggtgctgctgctgctgctccggcgatggccaatgcggcggagcgaaggctgcagctc 1027 |||| ||||||||||||| | |||||| | |||||| | |||||| |||||||||||| Sbjct: 80693 ggcgctgctgctgctgctccggcggcgacgaccaatggtggggagcggaggctgcagctc 80752 Query: 1028 tgggacttcaaggaggaaaggaagatatga 1057 ||||||||||||||||| ||||||| |||| Sbjct: 80753 tgggacttcaaggaggagaggaagacatga 80782 >dbj|AB071808.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF8, partial cds Length = 1403 Score = 262 bits (132), Expect = 3e-66 Identities = 207/232 (89%) Strand = Plus / Plus Query: 272 gcggcgtggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagc 331 ||||| ||||||||| ||||||||||||| || |||||||| || |||||| |||||||| Sbjct: 250 gcggcctggcggacgagccgggtggcgcgggcggcggcgggggggaaggacaggcacagc 309 Query: 332 aaggtggtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcg 391 ||||||||||| | || || |||||||||||||| || |||| |||||||||||||| Sbjct: 310 aaggtggtgacgtcgcgggggctccgcgaccgccgggtgaggctgtcggtgccgacggcc 369 Query: 392 atccagttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgag 451 ||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 370 atcgcgttctacgacatccaggaccgcctcggcgtcgaccagccgagcaaggccatcgag 429 Query: 452 tggctcatccgcgccgcctcccccgccatcgacgcgctcccgtcgctggact 503 |||||||||||||||||| | ||||||||||||||||||||||||| |||| Sbjct: 430 tggctcatccgcgccgccgcggccgccatcgacgcgctcccgtcgctcgact 481 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 542 gccggcgaagacgccgaggtcagcacctcggagaccagcaagacctccgtgctctcgctc 601 |||| ||| ||||||||||||||||| || ||||||||||||| |||||||||||| ||| Sbjct: 526 gccgccgacgacgccgaggtcagcacatccgagaccagcaagagctccgtgctctccctc 585 Query: 602 accaacgcccccggcgacaacggc 625 ||||||||||| ||||||||||| Sbjct: 586 gccaacgccccctgcgacaacggc 609 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 968 ggcggtgctgctgctgctgctccggcgatggccaatgcggcggagcgaaggctgcagctc 1027 |||| ||||||||||||| | |||||| | |||||| | |||||| |||||||||||| Sbjct: 961 ggcgctgctgctgctgctccggcggcgacgaccaatggtggggagcggaggctgcagctc 1020 Query: 1028 tgggacttcaaggaggaaaggaagatatga 1057 ||||||||||||||||| ||||||| |||| Sbjct: 1021 tgggacttcaaggaggagaggaagacatga 1050 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 236 bits (119), Expect = 2e-58 Identities = 209/239 (87%) Strand = Plus / Plus Query: 275 gcgtggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagcaag 334 ||||||||| || |||||||||||||||| |||||||||| |||||| ||||||||| Sbjct: 2022247 gcgtggcgggcgagccgggtggcgcgcgcagcggcgggcgagaaggacaagcacagcaaa 2022306 Query: 335 gtggtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcgatc 394 |||||||| |||| || |||| ||||||||||||| |||| ||||||||||| || ||| Sbjct: 2022307 gtggtgacgtcacgggggctccccgaccgccgcgtcaggctgtcggtgccgacagccatc 2022366 Query: 395 cagttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgagtgg 454 |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2022367 gcgttctacgacatccaggaccgcctcggcgtcgaccaaccaagcaaggccatcgagtgg 2022426 Query: 455 ctcatccgcgccgcctcccccgccatcgacgcgctcccgtcgctggactactcgttcgt 513 ||||||||||||||| | ||||||||||||| ||||| ||||| |||| ||| ||||| Sbjct: 2022427 ctcatccgcgccgccgctgccgccatcgacgcactcccatcgctcgactgctccttcgt 2022485 Score = 89.7 bits (45), Expect = 2e-14 Identities = 120/145 (82%) Strand = Plus / Plus Query: 354 tccgcgaccgccgcgtccggctctcggtgccgacggcgatccagttctacgacatccagg 413 ||||||||||||||||||| ||||| || | || || ||||||||||||||| |||||| Sbjct: 2783816 tccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccagg 2783875 Query: 414 accgcctgggcgtcgaccagcccagcaaggccatcgagtggctcatccgcgccgcctccc 473 | || || || |||||||| ||||||||||||||||||||||| |||||| || Sbjct: 2783876 atcgtctcgggtatgaccagccgagcaaggccatcgagtggctcattaaggccgccgccg 2783935 Query: 474 ccgccatcgacgcgctcccgtcgct 498 ||||||||||| |||||| ||||| Sbjct: 2783936 ccgccatcgacaagctcccttcgct 2783960 >dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 236 bits (119), Expect = 2e-58 Identities = 209/239 (87%) Strand = Plus / Plus Query: 275 gcgtggcggacgtgccgggtggcgcgcgctgcggcgggcggcaaggaccggcacagcaag 334 ||||||||| || |||||||||||||||| |||||||||| |||||| ||||||||| Sbjct: 106544 gcgtggcgggcgagccgggtggcgcgcgcagcggcgggcgagaaggacaagcacagcaaa 106603 Query: 335 gtggtgaccgcacgcggcctccgcgaccgccgcgtccggctctcggtgccgacggcgatc 394 |||||||| |||| || |||| ||||||||||||| |||| ||||||||||| || ||| Sbjct: 106604 gtggtgacgtcacgggggctccccgaccgccgcgtcaggctgtcggtgccgacagccatc 106663 Query: 395 cagttctacgacatccaggaccgcctgggcgtcgaccagcccagcaaggccatcgagtgg 454 |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 106664 gcgttctacgacatccaggaccgcctcggcgtcgaccaaccaagcaaggccatcgagtgg 106723 Query: 455 ctcatccgcgccgcctcccccgccatcgacgcgctcccgtcgctggactactcgttcgt 513 ||||||||||||||| | ||||||||||||| ||||| ||||| |||| ||| ||||| Sbjct: 106724 ctcatccgcgccgccgctgccgccatcgacgcactcccatcgctcgactgctccttcgt 106782