BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf044m02 (1112 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063475.1| Oryza sativa (japonica cultivar-group) Os06g... 307 5e-80 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 307 5e-80 dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D... 307 5e-80 dbj|AK105920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 5e-80 dbj|AK070725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 5e-80 >ref|NM_001063475.1| Oryza sativa (japonica cultivar-group) Os06g0172200 (Os06g0172200) mRNA, complete cds Length = 1170 Score = 307 bits (155), Expect = 5e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 514 gaggaggaagagagggacctgagggaggcgttcgacgtgttcgacagcaacaaggacggg 573 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 515 gaggaggaggagagggacctgagggaggcgttcgacgtgttcgacggcaacaaggacggc 574 Query: 574 ctcatctcggccgaggagctcggcaccgtcctgtgttcgctcggcctgcgccggcacggc 633 |||||||| |||||||||||||||||||| || || |||||||| |||| ||||||| Sbjct: 575 ctcatctccgccgaggagctcggcaccgtgctcgagtccctcggcctccgccagcacggc 634 Query: 634 ggccggctggccgtggccgagtgcctcgacatgatacgccttgtcgacagcgacggcgac 693 ||||| | ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 635 ggccgccccgccgtcgccgagtgccgcgacatgatccgcctcgtcgacagcgacggcgac 694 Query: 694 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcatagc 748 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 695 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcctagc 749 Score = 285 bits (144), Expect = 2e-73 Identities = 203/222 (91%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 226 cggcctgacccggaggcggacctggggatcgtgttctccacgttcgaccacgacggcgac 285 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 206 cggcctgacccggacgccgacctcgggatcgtgttctccacgttcgaccacgacggcgac 265 Query: 286 gggttcatcacggcgggggagctggaggagtcgctgaaacggctcggcatcgccgt---g 342 || ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| | Sbjct: 266 ggcttcatcacggcggcggagctggaggagtccctgaagcgcctcggcatcgccgtgtcg 325 Query: 343 tccgccgcctcggccgcgtccatggtggcgcgtgtcgacgccaacagcgacgggctcatc 402 ||||||||| |||||| || ||||||| || ||||||||||||||||||||||||||| Sbjct: 326 tccgccgccgaggccgccgccctggtggcccgcgtcgacgccaacagcgacgggctcatc 385 Query: 403 gacatccacgagttccgcgagctctacgactccatccccaag 444 || ||||||||||||||||||||||||||||||||||||||| Sbjct: 386 gatatccacgagttccgcgagctctacgactccatccccaag 427 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 50 ccatggcgcctctcctcctgctcttcttcctcggcggcctctgcgccctcttctccctcg 109 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 36 ccatggcgcctctcctcctcctcttcctcctcggcggcctctgcgccctcttctccctcg 95 Query: 110 cctcctc 116 ||||||| Sbjct: 96 cctcctc 102 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 307 bits (155), Expect = 5e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 514 gaggaggaagagagggacctgagggaggcgttcgacgtgttcgacagcaacaaggacggg 573 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3649023 gaggaggaggagagggacctgagggaggcgttcgacgtgttcgacggcaacaaggacggc 3649082 Query: 574 ctcatctcggccgaggagctcggcaccgtcctgtgttcgctcggcctgcgccggcacggc 633 |||||||| |||||||||||||||||||| || || |||||||| |||| ||||||| Sbjct: 3649083 ctcatctccgccgaggagctcggcaccgtgctcgagtccctcggcctccgccagcacggc 3649142 Query: 634 ggccggctggccgtggccgagtgcctcgacatgatacgccttgtcgacagcgacggcgac 693 ||||| | ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 3649143 ggccgccccgccgtcgccgagtgccgcgacatgatccgcctcgtcgacagcgacggcgac 3649202 Query: 694 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcatagc 748 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3649203 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcctagc 3649257 Score = 285 bits (144), Expect = 2e-73 Identities = 203/222 (91%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 226 cggcctgacccggaggcggacctggggatcgtgttctccacgttcgaccacgacggcgac 285 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3648714 cggcctgacccggacgccgacctcgggatcgtgttctccacgttcgaccacgacggcgac 3648773 Query: 286 gggttcatcacggcgggggagctggaggagtcgctgaaacggctcggcatcgccgt---g 342 || ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| | Sbjct: 3648774 ggcttcatcacggcggcggagctggaggagtccctgaagcgcctcggcatcgccgtgtcg 3648833 Query: 343 tccgccgcctcggccgcgtccatggtggcgcgtgtcgacgccaacagcgacgggctcatc 402 ||||||||| |||||| || ||||||| || ||||||||||||||||||||||||||| Sbjct: 3648834 tccgccgccgaggccgccgccctggtggcccgcgtcgacgccaacagcgacgggctcatc 3648893 Query: 403 gacatccacgagttccgcgagctctacgactccatccccaag 444 || ||||||||||||||||||||||||||||||||||||||| Sbjct: 3648894 gatatccacgagttccgcgagctctacgactccatccccaag 3648935 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 50 ccatggcgcctctcctcctgctcttcttcctcggcggcctctgcgccctcttctccctcg 109 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 3648544 ccatggcgcctctcctcctcctcttcctcctcggcggcctctgcgccctcttctccctcg 3648603 Query: 110 cctcctc 116 ||||||| Sbjct: 3648604 cctcctc 3648610 >dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 307 bits (155), Expect = 5e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 514 gaggaggaagagagggacctgagggaggcgttcgacgtgttcgacagcaacaaggacggg 573 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43251 gaggaggaggagagggacctgagggaggcgttcgacgtgttcgacggcaacaaggacggc 43310 Query: 574 ctcatctcggccgaggagctcggcaccgtcctgtgttcgctcggcctgcgccggcacggc 633 |||||||| |||||||||||||||||||| || || |||||||| |||| ||||||| Sbjct: 43311 ctcatctccgccgaggagctcggcaccgtgctcgagtccctcggcctccgccagcacggc 43370 Query: 634 ggccggctggccgtggccgagtgcctcgacatgatacgccttgtcgacagcgacggcgac 693 ||||| | ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 43371 ggccgccccgccgtcgccgagtgccgcgacatgatccgcctcgtcgacagcgacggcgac 43430 Query: 694 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcatagc 748 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 43431 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcctagc 43485 Score = 285 bits (144), Expect = 2e-73 Identities = 203/222 (91%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 226 cggcctgacccggaggcggacctggggatcgtgttctccacgttcgaccacgacggcgac 285 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 42942 cggcctgacccggacgccgacctcgggatcgtgttctccacgttcgaccacgacggcgac 43001 Query: 286 gggttcatcacggcgggggagctggaggagtcgctgaaacggctcggcatcgccgt---g 342 || ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| | Sbjct: 43002 ggcttcatcacggcggcggagctggaggagtccctgaagcgcctcggcatcgccgtgtcg 43061 Query: 343 tccgccgcctcggccgcgtccatggtggcgcgtgtcgacgccaacagcgacgggctcatc 402 ||||||||| |||||| || ||||||| || ||||||||||||||||||||||||||| Sbjct: 43062 tccgccgccgaggccgccgccctggtggcccgcgtcgacgccaacagcgacgggctcatc 43121 Query: 403 gacatccacgagttccgcgagctctacgactccatccccaag 444 || ||||||||||||||||||||||||||||||||||||||| Sbjct: 43122 gatatccacgagttccgcgagctctacgactccatccccaag 43163 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 50 ccatggcgcctctcctcctgctcttcttcctcggcggcctctgcgccctcttctccctcg 109 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 42772 ccatggcgcctctcctcctcctcttcctcctcggcggcctctgcgccctcttctccctcg 42831 Query: 110 cctcctc 116 ||||||| Sbjct: 42832 cctcctc 42838 >dbj|AK105920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A03, full insert sequence Length = 1170 Score = 307 bits (155), Expect = 5e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 514 gaggaggaagagagggacctgagggaggcgttcgacgtgttcgacagcaacaaggacggg 573 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 515 gaggaggaggagagggacctgagggaggcgttcgacgtgttcgacggcaacaaggacggc 574 Query: 574 ctcatctcggccgaggagctcggcaccgtcctgtgttcgctcggcctgcgccggcacggc 633 |||||||| |||||||||||||||||||| || || |||||||| |||| ||||||| Sbjct: 575 ctcatctccgccgaggagctcggcaccgtgctcgagtccctcggcctccgccagcacggc 634 Query: 634 ggccggctggccgtggccgagtgcctcgacatgatacgccttgtcgacagcgacggcgac 693 ||||| | ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 635 ggccgccccgccgtcgccgagtgccgcgacatgatccgcctcgtcgacagcgacggcgac 694 Query: 694 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcatagc 748 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 695 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcctagc 749 Score = 285 bits (144), Expect = 2e-73 Identities = 203/222 (91%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 226 cggcctgacccggaggcggacctggggatcgtgttctccacgttcgaccacgacggcgac 285 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 206 cggcctgacccggacgccgacctcgggatcgtgttctccacgttcgaccacgacggcgac 265 Query: 286 gggttcatcacggcgggggagctggaggagtcgctgaaacggctcggcatcgccgt---g 342 || ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| | Sbjct: 266 ggcttcatcacggcggcggagctggaggagtccctgaagcgcctcggcatcgccgtgtcg 325 Query: 343 tccgccgcctcggccgcgtccatggtggcgcgtgtcgacgccaacagcgacgggctcatc 402 ||||||||| |||||| || ||||||| || ||||||||||||||||||||||||||| Sbjct: 326 tccgccgccgaggccgccgccctggtggcccgcgtcgacgccaacagcgacgggctcatc 385 Query: 403 gacatccacgagttccgcgagctctacgactccatccccaag 444 || ||||||||||||||||||||||||||||||||||||||| Sbjct: 386 gatatccacgagttccgcgagctctacgactccatccccaag 427 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 50 ccatggcgcctctcctcctgctcttcttcctcggcggcctctgcgccctcttctccctcg 109 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 36 ccatggcgcctctcctcctcctcttcctcctcggcggcctctgcgccctcttctccctcg 95 Query: 110 cctcctc 116 ||||||| Sbjct: 96 cctcctc 102 >dbj|AK070725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057D02, full insert sequence Length = 1156 Score = 307 bits (155), Expect = 5e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 514 gaggaggaagagagggacctgagggaggcgttcgacgtgttcgacagcaacaaggacggg 573 |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 516 gaggaggaggagagggacctgagggaggcgttcgacgtgttcgacggcaacaaggacggc 575 Query: 574 ctcatctcggccgaggagctcggcaccgtcctgtgttcgctcggcctgcgccggcacggc 633 |||||||| |||||||||||||||||||| || || |||||||| |||| ||||||| Sbjct: 576 ctcatctccgccgaggagctcggcaccgtgctcgagtccctcggcctccgccagcacggc 635 Query: 634 ggccggctggccgtggccgagtgcctcgacatgatacgccttgtcgacagcgacggcgac 693 ||||| | ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| Sbjct: 636 ggccgccccgccgtcgccgagtgccgcgacatgatccgcctcgtcgacagcgacggcgac 695 Query: 694 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcatagc 748 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 696 ggcatggtcagcttcgaggagttcaagcgcatgatgaccgtcgtcaaggcctagc 750 Score = 285 bits (144), Expect = 2e-73 Identities = 203/222 (91%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 226 cggcctgacccggaggcggacctggggatcgtgttctccacgttcgaccacgacggcgac 285 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 207 cggcctgacccggacgccgacctcgggatcgtgttctccacgttcgaccacgacggcgac 266 Query: 286 gggttcatcacggcgggggagctggaggagtcgctgaaacggctcggcatcgccgt---g 342 || ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| | Sbjct: 267 ggcttcatcacggcggcggagctggaggagtccctgaagcgcctcggcatcgccgtgtcg 326 Query: 343 tccgccgcctcggccgcgtccatggtggcgcgtgtcgacgccaacagcgacgggctcatc 402 ||||||||| |||||| || ||||||| || ||||||||||||||||||||||||||| Sbjct: 327 tccgccgccgaggccgccgccctggtggcccgcgtcgacgccaacagcgacgggctcatc 386 Query: 403 gacatccacgagttccgcgagctctacgactccatccccaag 444 || ||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gatatccacgagttccgcgagctctacgactccatccccaag 428 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 50 ccatggcgcctctcctcctgctcttcttcctcggcggcctctgcgccctcttctccctcg 109 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 37 ccatggcgcctctcctcctcctcttcctcctcggcggcctctgcgccctcttctccctcg 96 Query: 110 cctcctc 116 ||||||| Sbjct: 97 cctcctc 103