BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf044g09 (1176 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001069915.1| Oryza sativa (japonica cultivar-group) Os09g... 375 e-100 dbj|AK110733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-100 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 >ref|NM_001069915.1| Oryza sativa (japonica cultivar-group) Os09g0459200 (Os09g0459200) mRNA, complete cds Length = 1139 Score = 375 bits (189), Expect = e-100 Identities = 315/356 (88%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 318 gcgccgggggacgcggacttcgagttctccgtcggcagccacccgatgatggccgccgac 377 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gcgcctggggacgccgacttcgagttctccgtcggcagccacccgatgatggccgccgac 320 Query: 378 cagctcttctccaagggccgcctcctgcctctccgggaggccccgcacgacca---cggc 434 ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 321 cagctgatctccaagggccgcctcctgccgctccgggaggccccgcacggccacggcggc 380 Query: 435 gccggcgccggcggccggcccctgacgctgcgcgacgagctgcgctcggacaaccgccac 494 |||| ||||||||||||||| || ||||| ||||||||||||||| |||||| |||||| Sbjct: 381 gccgacgccggcggccggccactcacgctccgcgacgagctgcgcacggacagccgccat 440 Query: 495 gggcgcgtcccccgcgcgcccaacatccggtggaaggagttgctcggcctcaagaagggg 554 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct: 441 ggccgcgtcccccgcgcgcccaacattcggtggaaggagttcctcggcctcaagaaggcg 500 Query: 555 cccaagaa---acccgccgccgacgctggcgcgggc------acgtcgtcggccgacgcc 605 |||||||| ||| |||||||||||| ||| ||| |||||||||||||| || Sbjct: 501 cccaagaaggcccccaccgccgacgctgccgccggcgccacatcgtcgtcggccgacacc 560 Query: 606 cgtatggatcttggaggtcagggaggcacgagagactgaagtaacaaacgcaatga 661 | ||||||||||||||||| || |||||||||||||||| |||||||||||||| Sbjct: 561 cagatggatcttggaggtcaagggagcacgagagactgaagcaacaaacgcaatga 616 Score = 159 bits (80), Expect = 3e-35 Identities = 170/194 (87%), Gaps = 12/194 (6%) Strand = Plus / Plus Query: 841 catttccttttacctctttgttgccttttttttgggtgtaaaagggaattttgatcttta 900 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 794 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 853 Query: 901 gtttttgg---ttgg--gtcgtcgggtagattgatggttgca-tgtagtcaaattaactc 954 |||||||| ||| |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 854 gtttttgggtaatggtcgtcgtcgggtagatgggtggttccagtgtagtcaaattaactc 913 Query: 955 ctctagctgtgcctctggtgttttgtattgaaagggccagt-taaatgtattttt-ccca 1012 | |||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| Sbjct: 914 c----gctgcgcctctgatgttttgtattggaagggccagtaaaaatgtatttttcccca 969 Query: 1013 catggtgtggtcct 1026 |||||||||||||| Sbjct: 970 catggtgtggtcct 983 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 230 gtcgttcatggcgccgcggatatccttctccagcgacttcgcgctcgagccgccgccgcc 289 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 176 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 235 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1026 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1064 ||||||||||||||||||||||||||||||||||||||| Sbjct: 994 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1032 >dbj|AK110733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E12, full insert sequence Length = 1139 Score = 375 bits (189), Expect = e-100 Identities = 315/356 (88%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 318 gcgccgggggacgcggacttcgagttctccgtcggcagccacccgatgatggccgccgac 377 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gcgcctggggacgccgacttcgagttctccgtcggcagccacccgatgatggccgccgac 320 Query: 378 cagctcttctccaagggccgcctcctgcctctccgggaggccccgcacgacca---cggc 434 ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 321 cagctgatctccaagggccgcctcctgccgctccgggaggccccgcacggccacggcggc 380 Query: 435 gccggcgccggcggccggcccctgacgctgcgcgacgagctgcgctcggacaaccgccac 494 |||| ||||||||||||||| || ||||| ||||||||||||||| |||||| |||||| Sbjct: 381 gccgacgccggcggccggccactcacgctccgcgacgagctgcgcacggacagccgccat 440 Query: 495 gggcgcgtcccccgcgcgcccaacatccggtggaaggagttgctcggcctcaagaagggg 554 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct: 441 ggccgcgtcccccgcgcgcccaacattcggtggaaggagttcctcggcctcaagaaggcg 500 Query: 555 cccaagaa---acccgccgccgacgctggcgcgggc------acgtcgtcggccgacgcc 605 |||||||| ||| |||||||||||| ||| ||| |||||||||||||| || Sbjct: 501 cccaagaaggcccccaccgccgacgctgccgccggcgccacatcgtcgtcggccgacacc 560 Query: 606 cgtatggatcttggaggtcagggaggcacgagagactgaagtaacaaacgcaatga 661 | ||||||||||||||||| || |||||||||||||||| |||||||||||||| Sbjct: 561 cagatggatcttggaggtcaagggagcacgagagactgaagcaacaaacgcaatga 616 Score = 159 bits (80), Expect = 3e-35 Identities = 170/194 (87%), Gaps = 12/194 (6%) Strand = Plus / Plus Query: 841 catttccttttacctctttgttgccttttttttgggtgtaaaagggaattttgatcttta 900 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 794 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 853 Query: 901 gtttttgg---ttgg--gtcgtcgggtagattgatggttgca-tgtagtcaaattaactc 954 |||||||| ||| |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 854 gtttttgggtaatggtcgtcgtcgggtagatgggtggttccagtgtagtcaaattaactc 913 Query: 955 ctctagctgtgcctctggtgttttgtattgaaagggccagt-taaatgtattttt-ccca 1012 | |||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| Sbjct: 914 c----gctgcgcctctgatgttttgtattggaagggccagtaaaaatgtatttttcccca 969 Query: 1013 catggtgtggtcct 1026 |||||||||||||| Sbjct: 970 catggtgtggtcct 983 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 230 gtcgttcatggcgccgcggatatccttctccagcgacttcgcgctcgagccgccgccgcc 289 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 176 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 235 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1026 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1064 ||||||||||||||||||||||||||||||||||||||| Sbjct: 994 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1032 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 329 bits (166), Expect = 1e-86 Identities = 228/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 318 gcgccgggggacgcggacttcgagttctccgtcggcagccacccgatgatggccgccgac 377 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17296549 gcgcctggggacgccgacttcgagttctccgtcggcagccacccgatgatggccgccgac 17296608 Query: 378 cagctcttctccaagggccgcctcctgcctctccgggaggccccgcacgacca---cggc 434 ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 17296609 cagctgatctccaagggccgcctcctgccgctccgggaggccccgcacggccacggcggc 17296668 Query: 435 gccggcgccggcggccggcccctgacgctgcgcgacgagctgcgctcggacaaccgccac 494 |||| ||||||||||||||| || ||||| ||||||||||||||| |||||| |||||| Sbjct: 17296669 gccgacgccggcggccggccactcacgctccgcgacgagctgcgcacggacagccgccat 17296728 Query: 495 gggcgcgtcccccgcgcgcccaacatccggtggaaggagttgctcggcctcaagaagggg 554 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct: 17296729 ggccgcgtcccccgcgcgcccaacattcggtggaaggagttcctcggcctcaagaaggcg 17296788 Query: 555 cccaagaa 562 |||||||| Sbjct: 17296789 cccaagaa 17296796 Score = 159 bits (80), Expect = 3e-35 Identities = 170/194 (87%), Gaps = 12/194 (6%) Strand = Plus / Plus Query: 841 catttccttttacctctttgttgccttttttttgggtgtaaaagggaattttgatcttta 900 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 17297417 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 17297476 Query: 901 gtttttgg---ttgg--gtcgtcgggtagattgatggttgca-tgtagtcaaattaactc 954 |||||||| ||| |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 17297477 gtttttgggtaatggtcgtcgtcgggtagatgggtggttccagtgtagtcaaattaactc 17297536 Query: 955 ctctagctgtgcctctggtgttttgtattgaaagggccagt-taaatgtattttt-ccca 1012 | |||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| Sbjct: 17297537 c----gctgcgcctctgatgttttgtattggaagggccagtaaaaatgtatttttcccca 17297592 Query: 1013 catggtgtggtcct 1026 |||||||||||||| Sbjct: 17297593 catggtgtggtcct 17297606 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 230 gtcgttcatggcgccgcggatatccttctccagcgacttcgcgctcgagccgccgccgcc 289 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 17296464 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 17296523 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1026 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1064 ||||||||||||||||||||||||||||||||||||||| Sbjct: 17297617 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 17297655 >dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 329 bits (166), Expect = 1e-86 Identities = 228/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 318 gcgccgggggacgcggacttcgagttctccgtcggcagccacccgatgatggccgccgac 377 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83421 gcgcctggggacgccgacttcgagttctccgtcggcagccacccgatgatggccgccgac 83480 Query: 378 cagctcttctccaagggccgcctcctgcctctccgggaggccccgcacgacca---cggc 434 ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 83481 cagctgatctccaagggccgcctcctgccgctccgggaggccccgcacggccacggcggc 83540 Query: 435 gccggcgccggcggccggcccctgacgctgcgcgacgagctgcgctcggacaaccgccac 494 |||| ||||||||||||||| || ||||| ||||||||||||||| |||||| |||||| Sbjct: 83541 gccgacgccggcggccggccactcacgctccgcgacgagctgcgcacggacagccgccat 83600 Query: 495 gggcgcgtcccccgcgcgcccaacatccggtggaaggagttgctcggcctcaagaagggg 554 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct: 83601 ggccgcgtcccccgcgcgcccaacattcggtggaaggagttcctcggcctcaagaaggcg 83660 Query: 555 cccaagaa 562 |||||||| Sbjct: 83661 cccaagaa 83668 Score = 159 bits (80), Expect = 3e-35 Identities = 170/194 (87%), Gaps = 12/194 (6%) Strand = Plus / Plus Query: 841 catttccttttacctctttgttgccttttttttgggtgtaaaagggaattttgatcttta 900 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 84289 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 84348 Query: 901 gtttttgg---ttgg--gtcgtcgggtagattgatggttgca-tgtagtcaaattaactc 954 |||||||| ||| |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 84349 gtttttgggtaatggtcgtcgtcgggtagatgggtggttccagtgtagtcaaattaactc 84408 Query: 955 ctctagctgtgcctctggtgttttgtattgaaagggccagt-taaatgtattttt-ccca 1012 | |||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| Sbjct: 84409 c----gctgcgcctctgatgttttgtattggaagggccagtaaaaatgtatttttcccca 84464 Query: 1013 catggtgtggtcct 1026 |||||||||||||| Sbjct: 84465 catggtgtggtcct 84478 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 230 gtcgttcatggcgccgcggatatccttctccagcgacttcgcgctcgagccgccgccgcc 289 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 83336 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 83395 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1026 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1064 ||||||||||||||||||||||||||||||||||||||| Sbjct: 84489 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 84527 >dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 329 bits (166), Expect = 1e-86 Identities = 228/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 318 gcgccgggggacgcggacttcgagttctccgtcggcagccacccgatgatggccgccgac 377 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20462 gcgcctggggacgccgacttcgagttctccgtcggcagccacccgatgatggccgccgac 20521 Query: 378 cagctcttctccaagggccgcctcctgcctctccgggaggccccgcacgacca---cggc 434 ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 20522 cagctgatctccaagggccgcctcctgccgctccgggaggccccgcacggccacggcggc 20581 Query: 435 gccggcgccggcggccggcccctgacgctgcgcgacgagctgcgctcggacaaccgccac 494 |||| ||||||||||||||| || ||||| ||||||||||||||| |||||| |||||| Sbjct: 20582 gccgacgccggcggccggccactcacgctccgcgacgagctgcgcacggacagccgccat 20641 Query: 495 gggcgcgtcccccgcgcgcccaacatccggtggaaggagttgctcggcctcaagaagggg 554 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct: 20642 ggccgcgtcccccgcgcgcccaacattcggtggaaggagttcctcggcctcaagaaggcg 20701 Query: 555 cccaagaa 562 |||||||| Sbjct: 20702 cccaagaa 20709 Score = 159 bits (80), Expect = 3e-35 Identities = 170/194 (87%), Gaps = 12/194 (6%) Strand = Plus / Plus Query: 841 catttccttttacctctttgttgccttttttttgggtgtaaaagggaattttgatcttta 900 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 21330 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 21389 Query: 901 gtttttgg---ttgg--gtcgtcgggtagattgatggttgca-tgtagtcaaattaactc 954 |||||||| ||| |||||||||||||| | ||||| || ||||||||||||||||| Sbjct: 21390 gtttttgggtaatggtcgtcgtcgggtagatgggtggttccagtgtagtcaaattaactc 21449 Query: 955 ctctagctgtgcctctggtgttttgtattgaaagggccagt-taaatgtattttt-ccca 1012 | |||| ||||||| |||||||||||| |||||||||| |||||||||||| |||| Sbjct: 21450 c----gctgcgcctctgatgttttgtattggaagggccagtaaaaatgtatttttcccca 21505 Query: 1013 catggtgtggtcct 1026 |||||||||||||| Sbjct: 21506 catggtgtggtcct 21519 Score = 103 bits (52), Expect = 2e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 230 gtcgttcatggcgccgcggatatccttctccagcgacttcgcgctcgagccgccgccgcc 289 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20377 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 20436 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1026 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 1064 ||||||||||||||||||||||||||||||||||||||| Sbjct: 21530 ttgtacgtgttgtttagctgttcccatgcttgtctgctt 21568