BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf044e13 (1109 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064047.1| Oryza sativa (japonica cultivar-group) Os06g... 161 7e-36 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 161 7e-36 dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 161 7e-36 dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 161 7e-36 dbj|AK071655.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 7e-36 >ref|NM_001064047.1| Oryza sativa (japonica cultivar-group) Os06g0320300 (Os06g0320300) mRNA, complete cds Length = 1464 Score = 161 bits (81), Expect = 7e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 530 aatcaatgggtaggggaagaggcaggggaaggaagctcacgaatggcaggagccatgagg 589 |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 772 aatccatgggtaggggaagaggcagagggaggaagctcaccaatggcaggagccatgagg 831 Query: 590 ataaggggagcagtggtgaggaagttgtgcctgcaaggaagaggaggggaaggccccaaa 649 | ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| || | Sbjct: 832 acaagggcagcagcggcgaggaggttgtgcctgcgaggaagaggaggggaaggccgcaga 891 Query: 650 agcgcattg 658 ||||||||| Sbjct: 892 agcgcattg 900 Score = 107 bits (54), Expect = 1e-19 Identities = 167/204 (81%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 760 tcaagaacagaaaagaactctgcaggaaatggtaacaagagaaacagggtaccaaaaga- 818 |||||||| || |||| ||||||||| || || |||||||| |||||| | || || || Sbjct: 1011 tcaagaacggagaagagctctgcagggaagggcaacaagaggaacaggctgcccaaggag 1070 Query: 819 --agagagctcaaatctggacctggaagagaatagttcaagcactcgatctagcaatgat 876 ||| |||||||| || ||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 1071 gaagaaagctcaaaccttgaccttgaggagaacagctcaagcacccggtccagcaacgat 1130 Query: 877 gagtctaccaggcctaatggtttccggcagaacggaagccggcggaagagcacgcctcgg 936 || || |||||| | ||||| ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 1131 gaatccaccaggtccaatggcttccggcagaatggcagccggcgtaagagcacgccgcgg 1190 Query: 937 cgagcggcagaggcggggctatag 960 ||||| || ||||||||| ||||| Sbjct: 1191 cgagccgcggaggcggggatatag 1214 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 161 bits (81), Expect = 7e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 530 aatcaatgggtaggggaagaggcaggggaaggaagctcacgaatggcaggagccatgagg 589 |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 12289933 aatccatgggtaggggaagaggcagagggaggaagctcaccaatggcaggagccatgagg 12289874 Query: 590 ataaggggagcagtggtgaggaagttgtgcctgcaaggaagaggaggggaaggccccaaa 649 | ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| || | Sbjct: 12289873 acaagggcagcagcggcgaggaggttgtgcctgcgaggaagaggaggggaaggccgcaga 12289814 Query: 650 agcgcattg 658 ||||||||| Sbjct: 12289813 agcgcattg 12289805 Score = 107 bits (54), Expect = 1e-19 Identities = 167/204 (81%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 760 tcaagaacagaaaagaactctgcaggaaatggtaacaagagaaacagggtaccaaaaga- 818 |||||||| || |||| ||||||||| || || |||||||| |||||| | || || || Sbjct: 12289694 tcaagaacggagaagagctctgcagggaagggcaacaagaggaacaggctgcccaaggag 12289635 Query: 819 --agagagctcaaatctggacctggaagagaatagttcaagcactcgatctagcaatgat 876 ||| |||||||| || ||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 12289634 gaagaaagctcaaaccttgaccttgaggagaacagctcaagcacccggtccagcaacgat 12289575 Query: 877 gagtctaccaggcctaatggtttccggcagaacggaagccggcggaagagcacgcctcgg 936 || || |||||| | ||||| ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 12289574 gaatccaccaggtccaatggcttccggcagaatggcagccggcgtaagagcacgccgcgg 12289515 Query: 937 cgagcggcagaggcggggctatag 960 ||||| || ||||||||| ||||| Sbjct: 12289514 cgagccgcggaggcggggatatag 12289491 Score = 79.8 bits (40), Expect = 2e-11 Identities = 40/40 (100%) Strand = Plus / Plus Query: 1 ctctctctctctctctctctctctctctctctctctctgc 40 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5437346 ctctctctctctctctctctctctctctctctctctctgc 5437385 Score = 79.8 bits (40), Expect = 2e-11 Identities = 40/40 (100%) Strand = Plus / Minus Query: 1 ctctctctctctctctctctctctctctctctctctctgc 40 |||||||||||||||||||||||||||||||||||||||| Sbjct: 25506542 ctctctctctctctctctctctctctctctctctctctgc 25506503 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 2 tctctctctctctctctctctctctctctctctctctgc 40 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1764661 tctctctctctctctctctctctctctctctctctctgc 1764699 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 1 ctctctctctctctctctctctctctctctctctctctg 39 ||||||||||||||||||||||||||||||||||||||| Sbjct: 23850552 ctctctctctctctctctctctctctctctctctctctg 23850514 Score = 77.8 bits (39), Expect = 9e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 1 ctctctctctctctctctctctctctctctctctctctg 39 ||||||||||||||||||||||||||||||||||||||| Sbjct: 28149898 ctctctctctctctctctctctctctctctctctctctg 28149936 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 1 ctctctctctctctctctctctctctctctctctctctgcgcg 43 |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 30456140 ctctctctctctctctctctctctctctctctctctctccgcg 30456182 Score = 77.8 bits (39), Expect = 9e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 1 ctctctctctctctctctctctctctctctctctctctgcgcg 43 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 30456142 ctctctctctctctctctctctctctctctctctctccgcgcg 30456184 >dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 161 bits (81), Expect = 7e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 530 aatcaatgggtaggggaagaggcaggggaaggaagctcacgaatggcaggagccatgagg 589 |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 126955 aatccatgggtaggggaagaggcagagggaggaagctcaccaatggcaggagccatgagg 126896 Query: 590 ataaggggagcagtggtgaggaagttgtgcctgcaaggaagaggaggggaaggccccaaa 649 | ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| || | Sbjct: 126895 acaagggcagcagcggcgaggaggttgtgcctgcgaggaagaggaggggaaggccgcaga 126836 Query: 650 agcgcattg 658 ||||||||| Sbjct: 126835 agcgcattg 126827 Score = 107 bits (54), Expect = 1e-19 Identities = 167/204 (81%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 760 tcaagaacagaaaagaactctgcaggaaatggtaacaagagaaacagggtaccaaaaga- 818 |||||||| || |||| ||||||||| || || |||||||| |||||| | || || || Sbjct: 126716 tcaagaacggagaagagctctgcagggaagggcaacaagaggaacaggctgcccaaggag 126657 Query: 819 --agagagctcaaatctggacctggaagagaatagttcaagcactcgatctagcaatgat 876 ||| |||||||| || ||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 126656 gaagaaagctcaaaccttgaccttgaggagaacagctcaagcacccggtccagcaacgat 126597 Query: 877 gagtctaccaggcctaatggtttccggcagaacggaagccggcggaagagcacgcctcgg 936 || || |||||| | ||||| ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 126596 gaatccaccaggtccaatggcttccggcagaatggcagccggcgtaagagcacgccgcgg 126537 Query: 937 cgagcggcagaggcggggctatag 960 ||||| || ||||||||| ||||| Sbjct: 126536 cgagccgcggaggcggggatatag 126513 >dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 161 bits (81), Expect = 7e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 530 aatcaatgggtaggggaagaggcaggggaaggaagctcacgaatggcaggagccatgagg 589 |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 6393 aatccatgggtaggggaagaggcagagggaggaagctcaccaatggcaggagccatgagg 6334 Query: 590 ataaggggagcagtggtgaggaagttgtgcctgcaaggaagaggaggggaaggccccaaa 649 | ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| || | Sbjct: 6333 acaagggcagcagcggcgaggaggttgtgcctgcgaggaagaggaggggaaggccgcaga 6274 Query: 650 agcgcattg 658 ||||||||| Sbjct: 6273 agcgcattg 6265 Score = 107 bits (54), Expect = 1e-19 Identities = 167/204 (81%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 760 tcaagaacagaaaagaactctgcaggaaatggtaacaagagaaacagggtaccaaaaga- 818 |||||||| || |||| ||||||||| || || |||||||| |||||| | || || || Sbjct: 6154 tcaagaacggagaagagctctgcagggaagggcaacaagaggaacaggctgcccaaggag 6095 Query: 819 --agagagctcaaatctggacctggaagagaatagttcaagcactcgatctagcaatgat 876 ||| |||||||| || ||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 6094 gaagaaagctcaaaccttgaccttgaggagaacagctcaagcacccggtccagcaacgat 6035 Query: 877 gagtctaccaggcctaatggtttccggcagaacggaagccggcggaagagcacgcctcgg 936 || || |||||| | ||||| ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 6034 gaatccaccaggtccaatggcttccggcagaatggcagccggcgtaagagcacgccgcgg 5975 Query: 937 cgagcggcagaggcggggctatag 960 ||||| || ||||||||| ||||| Sbjct: 5974 cgagccgcggaggcggggatatag 5951 >dbj|AK071655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101J24, full insert sequence Length = 1359 Score = 161 bits (81), Expect = 7e-36 Identities = 117/129 (90%) Strand = Plus / Plus Query: 530 aatcaatgggtaggggaagaggcaggggaaggaagctcacgaatggcaggagccatgagg 589 |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 664 aatccatgggtaggggaagaggcagagggaggaagctcaccaatggcaggagccatgagg 723 Query: 590 ataaggggagcagtggtgaggaagttgtgcctgcaaggaagaggaggggaaggccccaaa 649 | ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| || | Sbjct: 724 acaagggcagcagcggcgaggaggttgtgcctgcgaggaagaggaggggaaggccgcaga 783 Query: 650 agcgcattg 658 ||||||||| Sbjct: 784 agcgcattg 792 Score = 107 bits (54), Expect = 1e-19 Identities = 167/204 (81%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 760 tcaagaacagaaaagaactctgcaggaaatggtaacaagagaaacagggtaccaaaaga- 818 |||||||| || |||| ||||||||| || || |||||||| |||||| | || || || Sbjct: 903 tcaagaacggagaagagctctgcagggaagggcaacaagaggaacaggctgcccaaggag 962 Query: 819 --agagagctcaaatctggacctggaagagaatagttcaagcactcgatctagcaatgat 876 ||| |||||||| || ||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 963 gaagaaagctcaaaccttgaccttgaggagaacagctcaagcacccggtccagcaacgat 1022 Query: 877 gagtctaccaggcctaatggtttccggcagaacggaagccggcggaagagcacgcctcgg 936 || || |||||| | ||||| ||||||||||| || |||||||| ||||||||||| ||| Sbjct: 1023 gaatccaccaggtccaatggcttccggcagaatggcagccggcgtaagagcacgccgcgg 1082 Query: 937 cgagcggcagaggcggggctatag 960 ||||| || ||||||||| ||||| Sbjct: 1083 cgagccgcggaggcggggatatag 1106