BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf043o16 (1033 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, c... 341 3e-90 gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence 204 5e-49 gb|AY103864.1| Zea mays PCO154745 mRNA sequence 204 5e-49 gb|AY111755.1| Zea mays CL20312_1 mRNA sequence 188 3e-44 gb|DQ244987.1| Zea mays clone 12061 mRNA sequence 180 7e-42 >gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, complete cds Length = 965 Score = 341 bits (172), Expect = 3e-90 Identities = 349/408 (85%) Strand = Plus / Plus Query: 302 atgatgagcgattacaaggtggagatgataaacgacgagatgcaggagttctatgtgcat 361 |||||||| || ||||||||||| ||||| ||||||| |||||| ||||||| || || Sbjct: 97 atgatgagtgactacaaggtggacatgatcaacgacgggatgcacgagttcttcgtccac 156 Query: 362 ttccatgggcctaacgacagtatttaccagggtggcgtatggagggtgagggtagaactc 421 ||||| || || || |||||||||||||||||||| || |||| ||| ||||| |||||| Sbjct: 157 ttccacggacccaaagacagtatttaccagggtggtgtgtggaaggtcagggttgaactc 216 Query: 422 ccagatgcttacccttacaaatccccttccattgggtttaccaacaagatatatcaccca 481 | || ||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 217 accgaagcttacccttacaaatccccttccattggcttcaccaacaagatctatcacccc 276 Query: 482 aatgtcgatgagatgtccggttctgtctgcttggatgtcatcaaccagacctggagccct 541 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 277 aatgtcgatgagatgtctggttctgtctgcttggatgtgatcaatcagacatggagcccg 336 Query: 542 atgtttgatcttgtcaatgtctttgaagtttttctccctcagcttcttctgtatcctaac 601 |||||||| ||||| ||| ||||||| || || || || |||||||| ||||| || ||| Sbjct: 337 atgtttgaccttgtgaatatctttgaggtgttcctgccccagcttctcctgtacccgaac 396 Query: 602 ccctcagatcccttgaacggcgaggctgctgcgctgatgatgcgtgacaagaacgcgtac 661 ||||| || ||||||||||||||||| ||| |||| |||||||| |||||||| || || Sbjct: 397 ccctcggaccccttgaacggcgaggcggcttcgctcatgatgcgcgacaagaatgcctat 456 Query: 662 gaacagaaagtgaaagaatattgcgacagatacgcaaagcctggagat 709 ||| | ||||| ||||||||||| || ||||| || ||||||| |||| Sbjct: 457 gaaaataaagtcaaagaatattgtgagagatatgccaagcctgaagat 504 Score = 79.8 bits (40), Expect = 2e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 743 gaggagctgagcgacgccgaaggctatgactccggtgacgaggtcatcatgggtaatgca 802 |||||||||||||||||||| ||||| |||||||| ||||||| ||||||||| | ||| Sbjct: 538 gaggagctgagcgacgccgagggctacgactccggcgacgaggccatcatgggccacgca 597 Query: 803 gaccctta 810 |||||||| Sbjct: 598 gaccctta 605 >gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence Length = 789 Score = 204 bits (103), Expect = 5e-49 Identities = 286/347 (82%) Strand = Plus / Plus Query: 302 atgatgagcgattacaaggtggagatgataaacgacgagatgcaggagttctatgtgcat 361 ||||||||||| ||||||||||||||| | ||||||| ||||||||| |||| || | Sbjct: 102 atgatgagcgactacaaggtggagatggtgaacgacgggatgcaggaattcttcgtcgaa 161 Query: 362 ttccatgggcctaacgacagtatttaccagggtggcgtatggagggtgagggtagaactc 421 ||| | || || ||| ||||| ||||| ||||| || |||| ||| |||||||||| Sbjct: 162 ttcaagggcccggccgaaagtatctaccaaggtggtgtctggaaggttcgggtagaactg 221 Query: 422 ccagatgcttacccttacaaatccccttccattgggtttaccaacaagatatatcaccca 481 || ||||| ||||||||||||||||| ||||| || || | ||||||||| |||||||| Sbjct: 222 cctgatgcatacccttacaaatccccgtccatcggcttcatcaacaagatttatcacccg 281 Query: 482 aatgtcgatgagatgtccggttctgtctgcttggatgtcatcaaccagacctggagccct 541 ||||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| Sbjct: 282 aatgtcgatgagatgtctggctctgtctgtttggatgtcataaaccagacatggagccca 341 Query: 542 atgtttgatcttgtcaatgtctttgaagtttttctccctcagcttcttctgtatcctaac 601 ||||||||||| || ||||| |||||||| || || || ||||| | ||||| || || Sbjct: 342 atgtttgatctagtaaatgtttttgaagtattccttccacagctgttgctgtacccaaat 401 Query: 602 ccctcagatcccttgaacggcgaggctgctgcgctgatgatgcgtga 648 || || ||||| || || || |||||||| || |||||||||||||| Sbjct: 402 ccttctgatccattaaatggggaggctgcagcactgatgatgcgtga 448 >gb|AY103864.1| Zea mays PCO154745 mRNA sequence Length = 906 Score = 204 bits (103), Expect = 5e-49 Identities = 286/347 (82%) Strand = Plus / Plus Query: 302 atgatgagcgattacaaggtggagatgataaacgacgagatgcaggagttctatgtgcat 361 ||||||||||| ||||||||||||||| | ||||| | ||||||||| |||| || | Sbjct: 239 atgatgagcgactacaaggtggagatggtgaacgatgggatgcaggaattcttcgtcgaa 298 Query: 362 ttccatgggcctaacgacagtatttaccagggtggcgtatggagggtgagggtagaactc 421 ||| | ||||| ||| ||||| ||||| ||||| || |||| ||| |||||||||| Sbjct: 299 ttcaaggggccggccgaaagtatctaccaaggtggtgtctggaaggttcgggtagaactg 358 Query: 422 ccagatgcttacccttacaaatccccttccattgggtttaccaacaagatatatcaccca 481 || ||||| ||||||||||||||||| ||||| || || | ||||||||| |||||||| Sbjct: 359 cctgatgcatacccttacaaatccccgtccatcggcttcatcaacaagatttatcacccg 418 Query: 482 aatgtcgatgagatgtccggttctgtctgcttggatgtcatcaaccagacctggagccct 541 ||||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| Sbjct: 419 aatgtcgatgagatgtctggctctgtctgtttggatgtcataaaccagacatggagccca 478 Query: 542 atgtttgatcttgtcaatgtctttgaagtttttctccctcagcttcttctgtatcctaac 601 ||||||||||| || ||||| |||||||| || || || ||||| | || ||||| || Sbjct: 479 atgtttgatctagtaaatgtttttgaagtattccttccacagctgttactatatccaaat 538 Query: 602 ccctcagatcccttgaacggcgaggctgctgcgctgatgatgcgtga 648 || || ||||| || || || |||||||| || |||||||||||||| Sbjct: 539 ccttctgatccattaaatggggaggctgcagcactgatgatgcgtga 585 >gb|AY111755.1| Zea mays CL20312_1 mRNA sequence Length = 907 Score = 188 bits (95), Expect = 3e-44 Identities = 212/251 (84%) Strand = Plus / Plus Query: 398 gtatggagggtgagggtagaactcccagatgcttacccttacaaatccccttccattggg 457 ||||||| ||| || |||||||| |||||||| || |||||||||||||| || ||||| Sbjct: 249 gtatggaaggttagagtagaactgccagatgcgtatccttacaaatccccatcgattggt 308 Query: 458 tttaccaacaagatatatcacccaaatgtcgatgagatgtccggttctgtctgcttggat 517 || | ||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 309 ttcatcaataagatatatcacccaaatgtcgatgaaatgtctggttcagtctgtttggat 368 Query: 518 gtcatcaaccagacctggagccctatgtttgatcttgtcaatgtctttgaagtttttctc 577 |||||||||||||| |||||||| |||||||||||||||||||| || || || || || Sbjct: 369 gtcatcaaccagacatggagcccaatgtttgatcttgtcaatgtgttcgaggtcttcctt 428 Query: 578 cctcagcttcttctgtatcctaacccctcagatcccttgaacggcgaggctgctgcgctg 637 || || ||||| | |||||||| || || ||||| || || || || || |||||| || Sbjct: 429 ccacaacttctgttatatcctaatccttctgatccattaaatggagatgcagctgcgttg 488 Query: 638 atgatgcgtga 648 ||||||||||| Sbjct: 489 atgatgcgtga 499 >gb|DQ244987.1| Zea mays clone 12061 mRNA sequence Length = 875 Score = 180 bits (91), Expect = 7e-42 Identities = 283/347 (81%) Strand = Plus / Plus Query: 302 atgatgagcgattacaaggtggagatgataaacgacgagatgcaggagttctatgtgcat 361 ||||||||||| ||||||||||||||| | ||||| | ||||||||| |||| || | Sbjct: 225 atgatgagcgactacaaggtggagatggtgaacgatgggatgcaggaattcttcgtcgaa 284 Query: 362 ttccatgggcctaacgacagtatttaccagggtggcgtatggagggtgagggtagaactc 421 ||| | ||||| ||| ||||| ||||| || || || |||| ||| ||||||||||| Sbjct: 285 ttcaaggggccggccgaaagtatctaccaaggcggtgtctggaaggttagggtagaactg 344 Query: 422 ccagatgcttacccttacaaatccccttccattgggtttaccaacaagatatatcaccca 481 || ||||| || |||||||||||||| ||||| || || | ||||||||| ||||||||| Sbjct: 345 cctgatgcatatccttacaaatccccgtccatcggcttcatcaacaagatttatcaccca 404 Query: 482 aatgtcgatgagatgtccggttctgtctgcttggatgtcatcaaccagacctggagccct 541 ||||||||||||||||| || ||||| || || |||||||| ||||| || |||||||| Sbjct: 405 aatgtcgatgagatgtctggctctgtatgtttagatgtcataaaccaaacatggagccca 464 Query: 542 atgtttgatcttgtcaatgtctttgaagtttttctccctcagcttcttctgtatcctaac 601 ||||||||||| || ||||| |||||||| || || || ||||| | || ||||| || Sbjct: 465 atgtttgatctagtaaatgtttttgaagtattccttccacagctgttactatatccaaat 524 Query: 602 ccctcagatcccttgaacggcgaggctgctgcgctgatgatgcgtga 648 || || ||||| || || || |||||||| || |||||||||||||| Sbjct: 525 ccttctgatccattaaatggggaggctgcagcactgatgatgcgtga 571