BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf043i04 (1207 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056081.1| Oryza sativa (japonica cultivar-group) Os03g... 652 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 488 e-134 gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 488 e-134 dbj|AB200236.1| Oryza sativa (japonica cultivar-group) CRLL2 mRN... 400 e-108 gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome... 369 2e-98 >ref|NM_001056081.1| Oryza sativa (japonica cultivar-group) Os03g0246900 (Os03g0246900) mRNA, complete cds Length = 828 Score = 652 bits (329), Expect = 0.0 Identities = 453/494 (91%), Gaps = 9/494 (1%) Strand = Plus / Plus Query: 142 agcggcagtggcggaggcggcggcgggccgtgcggcgcgtgcaagttcctgcggcgcaag 201 |||||| | ||||| || || |||||||||||||| |||||||||||||||||||||||| Sbjct: 82 agcggcggcggcggtggaggaggcgggccgtgcggggcgtgcaagttcctgcggcgcaag 141 Query: 202 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggaggagggcgcggcgcacttc 261 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggagcagggcgcggcgcacttc 201 Query: 262 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 261 Query: 322 gcgcacaagcgcctcgacgccgtcatcaccatctgctacgaggcccaggcccgcctccgc 381 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 262 gcgcacaagcgccccgacgccgtcgtcaccatctgctacgaggcccaggcccgcctccgc 321 Query: 382 gaccccgtctacggctgcgtcgcccacatcttcgcgctccaacagcaggtggcgaatctc 441 ||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 322 gaccccgtctacggctgcgtcgcccacatcttcgccctccagcagcaggtggtgaatctc 381 Query: 442 caggcggagctgacctacctgcaagcccacctggcgacgctggagctgccgtctccgcag 501 ||||| |||||||||||| ||||||||||||| || ||||||||||||||||| |||| | Sbjct: 382 caggccgagctgacctacttgcaagcccacctcgccacgctggagctgccgtccccgccg 441 Query: 502 c------tgccggccccgcc---aatgccgacgccggccccgttctccatctcggacctc 552 | ||||||| ||||| ||||||| |||||| ||||||||||||||||||||| Sbjct: 442 ccgctgatgccggcgccgccgcagatgccgatgccggcgccgttctccatctcggacctc 501 Query: 553 ccgttgtcgacgaacatcccgaccaccgtcgacctgtccgcgctcttcgatccgccggcg 612 |||| |||||||| | ||||||||||||||||||| || || |||||||| |||||| || Sbjct: 502 ccgtcgtcgacgagcgtcccgaccaccgtcgacctctcagctctcttcgacccgccgccg 561 Query: 613 cagcagcagtgggc 626 |||| ||| ||||| Sbjct: 562 cagccgcaatgggc 575 Score = 85.7 bits (43), Expect = 4e-13 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 721 ggcggcggagacctgcaggcgctggcgagggagctcctggcccgccacggccggtccgcc 780 ||||| |||||||| |||||||| || ||||||||||||| |||||| | |||||| Sbjct: 730 ggcggtggagaccttcaggcgctcgcaagggagctcctggatcgccacag---gtccgca 786 Query: 781 gtgaagcccgagcagccgccgccgccgcactcaagat 817 ||||||| |||||||||||||||||||||||| |||| Sbjct: 787 gtgaagctcgagcagccgccgccgccgcactctagat 823 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 488 bits (246), Expect = e-134 Identities = 279/290 (96%) Strand = Plus / Minus Query: 142 agcggcagtggcggaggcggcggcgggccgtgcggcgcgtgcaagttcctgcggcgcaag 201 |||||| | ||||| || || |||||||||||||| |||||||||||||||||||||||| Sbjct: 7736052 agcggcggcggcggtggaggaggcgggccgtgcggggcgtgcaagttcctgcggcgcaag 7735993 Query: 202 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggaggagggcgcggcgcacttc 261 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 7735992 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggagcagggcgcggcgcacttc 7735933 Query: 262 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7735932 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 7735873 Query: 322 gcgcacaagcgcctcgacgccgtcatcaccatctgctacgaggcccaggcccgcctccgc 381 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7735872 gcgcacaagcgccccgacgccgtcgtcaccatctgctacgaggcccaggcccgcctccgc 7735813 Query: 382 gaccccgtctacggctgcgtcgcccacatcttcgcgctccaacagcaggt 431 ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 7735812 gaccccgtctacggctgcgtcgcccacatcttcgccctccagcagcaggt 7735763 Score = 174 bits (88), Expect = 5e-40 Identities = 179/209 (85%), Gaps = 9/209 (4%) Strand = Plus / Minus Query: 427 caggtggcgaatctccaggcggagctgacctacctgcaagcccacctggcgacgctggag 486 ||||||| |||||||||||| |||||||||||| ||||||||||||| || ||||||||| Sbjct: 7734955 caggtggtgaatctccaggccgagctgacctacttgcaagcccacctcgccacgctggag 7734896 Query: 487 ctgccgtctccgcagc------tgccggccccgcca---atgccgacgccggccccgttc 537 |||||||| |||| || ||||||| ||||| ||||||| |||||| |||||| Sbjct: 7734895 ctgccgtccccgccgccgctgatgccggcgccgccgcagatgccgatgccggcgccgttc 7734836 Query: 538 tccatctcggacctcccgttgtcgacgaacatcccgaccaccgtcgacctgtccgcgctc 597 ||||||||||||||||||| |||||||| | ||||||||||||||||||| || || ||| Sbjct: 7734835 tccatctcggacctcccgtcgtcgacgagcgtcccgaccaccgtcgacctctcagctctc 7734776 Query: 598 ttcgatccgccggcgcagcagcagtgggc 626 ||||| |||||| |||||| ||| ||||| Sbjct: 7734775 ttcgacccgccgccgcagccgcaatgggc 7734747 Score = 147 bits (74), Expect = 1e-31 Identities = 125/142 (88%) Strand = Plus / Minus Query: 168 gccgtgcggcgcgtgcaagttcctgcggcgcaagtgcgtgagcgggtgcatcttcgcgcc 227 ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| Sbjct: 2709329 gccgtgcggcgcgtgcaagtttctgcggcgcaagtgcgtgcgcgggtgcgtgttcgcgcc 2709270 Query: 228 ctacttcgactcggaggagggcgcggcgcacttcgcggcggtgcacaaggtgttcggcgc 287 |||||| | ||| | || |||||||||||||| || | ||||||||||||||||| Sbjct: 2709269 atacttctgccacgagcaaggggcggcgcacttcgccgccatccacaaggtgttcggcgc 2709210 Query: 288 cagcaacgtgtccaagctgctc 309 |||||||||||||||||||||| Sbjct: 2709209 cagcaacgtgtccaagctgctc 2709188 Score = 131 bits (66), Expect = 7e-27 Identities = 125/142 (88%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 168 gccgtgcggcgcgtgcaagttcctgcggcgcaagtgcgtgagcgg-gtgcatcttcgcgc 226 ||||||||| |||||||||||||||||||||||||||| | |||| |||| | ||||||| Sbjct: 2704895 gccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcg-gcggagtgcgtgttcgcgc 2704953 Query: 227 cctacttcgactcggaggagggcgcggcgcacttcgcggcggtgcacaaggtgttcggcg 286 |||||||| | ||||||| || |||||||| ||||||||| | |||||||||||||||| Sbjct: 2704954 cctacttctgcgcggaggacggggcggcgcagttcgcggcgatacacaaggtgttcggcg 2705013 Query: 287 ccagcaacgtgtccaagctgct 308 ||||||||| | | |||||||| Sbjct: 2705014 ccagcaacgcggcgaagctgct 2705035 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 347 tcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgccc 406 |||| |||| ||||||||| ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2709150 tcactatctcctacgaggcgcaggcccgcctccgcgaccccatctatggctgcgtcgccc 2709091 Query: 407 acatcttcgcgctccaacagcaggt 431 |||||||||| ||||| |||||||| Sbjct: 2709090 acatcttcgccctccagcagcaggt 2709066 Score = 101 bits (51), Expect = 6e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 357 ctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcccacatcttcgc 416 ||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 2705084 ctacgaggcgcaggccaggctgcgcgaccccgtctacggctgcgtcgcccacatcttcgc 2705143 Query: 417 gctccaacagcaggt 431 ||| || |||||||| Sbjct: 2705144 gctgcagcagcaggt 2705158 Score = 85.7 bits (43), Expect = 4e-13 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Minus Query: 721 ggcggcggagacctgcaggcgctggcgagggagctcctggcccgccacggccggtccgcc 780 ||||| |||||||| |||||||| || ||||||||||||| |||||| | |||||| Sbjct: 7734592 ggcggtggagaccttcaggcgctcgcaagggagctcctggatcgccacag---gtccgca 7734536 Query: 781 gtgaagcccgagcagccgccgccgccgcactcaagat 817 ||||||| |||||||||||||||||||||||| |||| Sbjct: 7734535 gtgaagctcgagcagccgccgccgccgcactctagat 7734499 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 358 tacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcccacatct 412 ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 22929068 tacgaggccgaggcgcgcctccgcgaccccgtctacggctgcgtcgcctacatct 22929122 >gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 488 bits (246), Expect = e-134 Identities = 279/290 (96%) Strand = Plus / Plus Query: 142 agcggcagtggcggaggcggcggcgggccgtgcggcgcgtgcaagttcctgcggcgcaag 201 |||||| | ||||| || || |||||||||||||| |||||||||||||||||||||||| Sbjct: 114577 agcggcggcggcggtggaggaggcgggccgtgcggggcgtgcaagttcctgcggcgcaag 114636 Query: 202 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggaggagggcgcggcgcacttc 261 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114637 tgcgtgagcgggtgcatcttcgcgccctacttcgactcggagcagggcgcggcgcacttc 114696 Query: 262 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114697 gcggcggtgcacaaggtgttcggcgccagcaacgtgtccaagctgctcctccagatcccg 114756 Query: 322 gcgcacaagcgcctcgacgccgtcatcaccatctgctacgaggcccaggcccgcctccgc 381 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114757 gcgcacaagcgccccgacgccgtcgtcaccatctgctacgaggcccaggcccgcctccgc 114816 Query: 382 gaccccgtctacggctgcgtcgcccacatcttcgcgctccaacagcaggt 431 ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 114817 gaccccgtctacggctgcgtcgcccacatcttcgccctccagcagcaggt 114866 Score = 174 bits (88), Expect = 5e-40 Identities = 179/209 (85%), Gaps = 9/209 (4%) Strand = Plus / Plus Query: 427 caggtggcgaatctccaggcggagctgacctacctgcaagcccacctggcgacgctggag 486 ||||||| |||||||||||| |||||||||||| ||||||||||||| || ||||||||| Sbjct: 115674 caggtggtgaatctccaggccgagctgacctacttgcaagcccacctcgccacgctggag 115733 Query: 487 ctgccgtctccgcagc------tgccggccccgcca---atgccgacgccggccccgttc 537 |||||||| |||| || ||||||| ||||| ||||||| |||||| |||||| Sbjct: 115734 ctgccgtccccgccgccgctgatgccggcgccgccgcagatgccgatgccggcgccgttc 115793 Query: 538 tccatctcggacctcccgttgtcgacgaacatcccgaccaccgtcgacctgtccgcgctc 597 ||||||||||||||||||| |||||||| | ||||||||||||||||||| || || ||| Sbjct: 115794 tccatctcggacctcccgtcgtcgacgagcgtcccgaccaccgtcgacctctcagctctc 115853 Query: 598 ttcgatccgccggcgcagcagcagtgggc 626 ||||| |||||| |||||| ||| ||||| Sbjct: 115854 ttcgacccgccgccgcagccgcaatgggc 115882 Score = 85.7 bits (43), Expect = 4e-13 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 721 ggcggcggagacctgcaggcgctggcgagggagctcctggcccgccacggccggtccgcc 780 ||||| |||||||| |||||||| || ||||||||||||| |||||| | |||||| Sbjct: 116037 ggcggtggagaccttcaggcgctcgcaagggagctcctggatcgccacag---gtccgca 116093 Query: 781 gtgaagcccgagcagccgccgccgccgcactcaagat 817 ||||||| |||||||||||||||||||||||| |||| Sbjct: 116094 gtgaagctcgagcagccgccgccgccgcactctagat 116130 >dbj|AB200236.1| Oryza sativa (japonica cultivar-group) CRLL2 mRNA for LOB domain protein, complete cds Length = 810 Score = 400 bits (202), Expect = e-108 Identities = 301/334 (90%) Strand = Plus / Plus Query: 166 gggccgtgcggcgcgtgcaagttcctgcggcgcaagtgcgtgagcgggtgcatcttcgcg 225 ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 94 gggccgtgcggggcgtgcaagttcttgcggcggaagtgcgtgcaggggtgcatcttcgcg 153 Query: 226 ccctacttcgactcggaggagggcgcggcgcacttcgcggcggtgcacaaggtgttcggc 285 ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 154 ccctacttcgactcggaggccggggcggcgcacttcgcggcggtgcacaaggtgttcggc 213 Query: 286 gccagcaacgtgtccaagctgctcctccagatcccggcgcacaagcgcctcgacgccgtc 345 ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 214 gccagcaacgtgtccaagctgctgcagcagatcccggcgcaccgccgcctcgacgccgtc 273 Query: 346 atcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gtcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcc 333 Query: 406 cacatcttcgcgctccaacagcaggtggcgaatctccaggcggagctgacctacctgcaa 465 ||||||||| |||||||| ||||| || ||||||| | ||||||| |||||||||| Sbjct: 334 cacatcttccacctccaacaccaggtagcaggtctccagtccgagctgaactacctgcaa 393 Query: 466 gcccacctggcgacgctggagctgccgtctccgc 499 | ||||| ||||| ||||||||||||| |||| Sbjct: 394 ggtcacctctcgacgatggagctgccgtcgccgc 427 >gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 369 bits (186), Expect = 2e-98 Identities = 246/266 (92%) Strand = Plus / Minus Query: 166 gggccgtgcggcgcgtgcaagttcctgcggcgcaagtgcgtgagcgggtgcatcttcgcg 225 ||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 87111 gggccgtgcggggcgtgcaagttcttgcggcggaagtgcgtgcaggggtgcatcttcgcg 87052 Query: 226 ccctacttcgactcggaggagggcgcggcgcacttcgcggcggtgcacaaggtgttcggc 285 ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 87051 ccctacttcgactcggaggccggggcggcgcacttcgcggcggtgcacaaggtgttcggc 86992 Query: 286 gccagcaacgtgtccaagctgctcctccagatcccggcgcacaagcgcctcgacgccgtc 345 ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 86991 gccagcaacgtgtccaagctgctgcagcagatcccggcgcaccgccgcctcgacgccgtc 86932 Query: 346 atcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86931 gtcaccatctgctacgaggcccaggcccgcctccgcgaccccgtctacggctgcgtcgcc 86872 Query: 406 cacatcttcgcgctccaacagcaggt 431 ||||||||| |||||||| ||||| Sbjct: 86871 cacatcttccacctccaacaccaggt 86846