BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf042g24 (924 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061530.1| Oryza sativa (japonica cultivar-group) Os05g... 424 e-115 gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome... 424 e-115 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 424 e-115 dbj|AK073471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115 ref|NM_001049051.1| Oryza sativa (japonica cultivar-group) Os01g... 133 1e-27 >ref|NM_001061530.1| Oryza sativa (japonica cultivar-group) Os05g0238400 (Os05g0238400) mRNA, complete cds Length = 1291 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Plus Query: 174 ctcctccgcggtggcctcctgcgtcgtggccgcgctcttcctcctgctcgctgccggcgt 233 |||||||| || ||| |||||||||||||| ||||| ||| |||||||||| || |||| Sbjct: 195 ctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcgg 254 Query: 234 tgccgctgcggcgctgttcctgctcttccgaccgcgcccgccggccatcgccgtgacggc 293 ||||| || |||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 255 cgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggc 314 Query: 294 cgtgcagctcccctccttcgtcttcggcaacggcaccgtcgccttcaccttccagcagct 353 |||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||| Sbjct: 315 cgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagct 374 Query: 354 cgcctccgtccgcaacccgaaccgcgcgccgctcgcgcactacgacagctccctccacgt 413 |||||||||||||||||| |||||| | ||||||||||||||||||||||| |||| ||| Sbjct: 375 cgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgt 434 Query: 414 cgcctacgccggcggggaggtcggctccatgtacatcccagccggacagatcgacggaga 473 ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 435 cgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggg 494 Query: 474 gcggacgcagtacatggccaccagcttcaccgtccccgcctttgccgtctcctcctcc 531 ||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 495 gcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctcc 552 Score = 170 bits (86), Expect = 6e-39 Identities = 137/153 (89%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 600 ggcgccgccggtgatggaggtggactcgctgctggtggtgaagggcaaggtcaccgtgct 659 ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||| | || Sbjct: 681 ggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcct 740 Query: 660 gcgggtgttcacccaccacatcgaggccgccaaggtgtgccgcatcggcgtctcgccggc 719 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 741 ccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggc 800 Query: 720 cgatggc--cttgctcggcttccggtgctgacc 750 || ||| | ||||||| |||||||||||||| Sbjct: 801 ggacggccgcgtgctcggattccggtgctgacc 833 >gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Minus Query: 174 ctcctccgcggtggcctcctgcgtcgtggccgcgctcttcctcctgctcgctgccggcgt 233 |||||||| || ||| |||||||||||||| ||||| ||| |||||||||| || |||| Sbjct: 72282 ctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcgg 72223 Query: 234 tgccgctgcggcgctgttcctgctcttccgaccgcgcccgccggccatcgccgtgacggc 293 ||||| || |||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 72222 cgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggc 72163 Query: 294 cgtgcagctcccctccttcgtcttcggcaacggcaccgtcgccttcaccttccagcagct 353 |||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||| Sbjct: 72162 cgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagct 72103 Query: 354 cgcctccgtccgcaacccgaaccgcgcgccgctcgcgcactacgacagctccctccacgt 413 |||||||||||||||||| |||||| | ||||||||||||||||||||||| |||| ||| Sbjct: 72102 cgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgt 72043 Query: 414 cgcctacgccggcggggaggtcggctccatgtacatcccagccggacagatcgacggaga 473 ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 72042 cgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggg 71983 Query: 474 gcggacgcagtacatggccaccagcttcaccgtccccgcctttgccgtctcctcctcc 531 ||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 71982 gcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctcc 71925 Score = 170 bits (86), Expect = 6e-39 Identities = 137/153 (89%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 600 ggcgccgccggtgatggaggtggactcgctgctggtggtgaagggcaaggtcaccgtgct 659 ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||| | || Sbjct: 71796 ggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcct 71737 Query: 660 gcgggtgttcacccaccacatcgaggccgccaaggtgtgccgcatcggcgtctcgccggc 719 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 71736 ccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggc 71677 Query: 720 cgatggc--cttgctcggcttccggtgctgacc 750 || ||| | ||||||| |||||||||||||| Sbjct: 71676 ggacggccgcgtgctcggattccggtgctgacc 71644 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Minus Query: 174 ctcctccgcggtggcctcctgcgtcgtggccgcgctcttcctcctgctcgctgccggcgt 233 |||||||| || ||| |||||||||||||| ||||| ||| |||||||||| || |||| Sbjct: 8351238 ctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcgg 8351179 Query: 234 tgccgctgcggcgctgttcctgctcttccgaccgcgcccgccggccatcgccgtgacggc 293 ||||| || |||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 8351178 cgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggc 8351119 Query: 294 cgtgcagctcccctccttcgtcttcggcaacggcaccgtcgccttcaccttccagcagct 353 |||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||| Sbjct: 8351118 cgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagct 8351059 Query: 354 cgcctccgtccgcaacccgaaccgcgcgccgctcgcgcactacgacagctccctccacgt 413 |||||||||||||||||| |||||| | ||||||||||||||||||||||| |||| ||| Sbjct: 8351058 cgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgt 8350999 Query: 414 cgcctacgccggcggggaggtcggctccatgtacatcccagccggacagatcgacggaga 473 ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 8350998 cgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggg 8350939 Query: 474 gcggacgcagtacatggccaccagcttcaccgtccccgcctttgccgtctcctcctcc 531 ||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 8350938 gcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctcc 8350881 Score = 170 bits (86), Expect = 6e-39 Identities = 137/153 (89%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 600 ggcgccgccggtgatggaggtggactcgctgctggtggtgaagggcaaggtcaccgtgct 659 ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||| | || Sbjct: 8350752 ggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcct 8350693 Query: 660 gcgggtgttcacccaccacatcgaggccgccaaggtgtgccgcatcggcgtctcgccggc 719 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 8350692 ccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggc 8350633 Query: 720 cgatggc--cttgctcggcttccggtgctgacc 750 || ||| | ||||||| |||||||||||||| Sbjct: 8350632 ggacggccgcgtgctcggattccggtgctgacc 8350600 >dbj|AK073471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044N23, full insert sequence Length = 1292 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Plus Query: 174 ctcctccgcggtggcctcctgcgtcgtggccgcgctcttcctcctgctcgctgccggcgt 233 |||||||| || ||| |||||||||||||| ||||| ||| |||||||||| || |||| Sbjct: 196 ctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcgg 255 Query: 234 tgccgctgcggcgctgttcctgctcttccgaccgcgcccgccggccatcgccgtgacggc 293 ||||| || |||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 256 cgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggc 315 Query: 294 cgtgcagctcccctccttcgtcttcggcaacggcaccgtcgccttcaccttccagcagct 353 |||||||||||||||||||| || | |||||||||||||||||||||| ||||||||||| Sbjct: 316 cgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagct 375 Query: 354 cgcctccgtccgcaacccgaaccgcgcgccgctcgcgcactacgacagctccctccacgt 413 |||||||||||||||||| |||||| | ||||||||||||||||||||||| |||| ||| Sbjct: 376 cgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgt 435 Query: 414 cgcctacgccggcggggaggtcggctccatgtacatcccagccggacagatcgacggaga 473 ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 436 cgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggg 495 Query: 474 gcggacgcagtacatggccaccagcttcaccgtccccgcctttgccgtctcctcctcc 531 ||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 496 gcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctcc 553 Score = 170 bits (86), Expect = 6e-39 Identities = 137/153 (89%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 600 ggcgccgccggtgatggaggtggactcgctgctggtggtgaagggcaaggtcaccgtgct 659 ||||| |||||||||||||||||||||||||||||||||||| || ||||| ||| | || Sbjct: 682 ggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcct 741 Query: 660 gcgggtgttcacccaccacatcgaggccgccaaggtgtgccgcatcggcgtctcgccggc 719 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 742 ccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggc 801 Query: 720 cgatggc--cttgctcggcttccggtgctgacc 750 || ||| | ||||||| |||||||||||||| Sbjct: 802 ggacggccgcgtgctcggattccggtgctgacc 834 >ref|NM_001049051.1| Oryza sativa (japonica cultivar-group) Os01g0234700 (Os01g0234700) mRNA, partial cds Length = 1020 Score = 133 bits (67), Expect = 1e-27 Identities = 183/221 (82%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 241 gcggcgctgttcctgctcttccgaccgcgcccgccggccatcgccgtgacggccgtgcag 300 |||||||||||| |||| ||||| ||||||||||| | |||||| ||| |||| |||| | Sbjct: 293 gcggcgctgttcgtgctgttccggccgcgcccgcccgacatcgcggtggcggcggtgcgg 352 Query: 301 ctcccctccttcgtcttcggc---aacggcaccgtcgccttcaccttccagcagctcgcc 357 || || | |||| | |||| |||||||| || || ||||| ||| ||||| ||| Sbjct: 353 ctgccggcgttcgcgtccggcccgaacggcacggtggcgttcacgttcgagcagacggcc 412 Query: 358 tccgtccgcaacccgaaccgcgcgccgctcgcgcactacgacagctccctccacgtcgcc 417 |||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 413 gccgtgcgcaaccccaaccgcgcgccgctcgcgcacttcgacagctcgctccgcgtcgcc 472 Query: 418 tacgccggcggggaggtcggctccatgtacatcccagccgg 458 ||||||||||| ||| |||||||| | |||||||| ||||| Sbjct: 473 tacgccggcggcgagctcggctccgtctacatccccgccgg 513 Score = 127 bits (64), Expect = 9e-26 Identities = 124/143 (86%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 608 cggtgatggaggtggactcgctgctggtggtgaagggcaaggtcaccgtgctgcgggtgt 667 ||||||||||||| ||||||||||||||||| ||||| | ||| ||||||||||| ||| Sbjct: 663 cggtgatggaggtcgactcgctgctggtggtcaaggggagggtgaccgtgctgcgtgtgc 722 Query: 668 tcacccaccacatcgaggccgccaaggtgtgccgcatcggcgtctcgccggccgatggc- 726 | || |||||| ||||||| ||||||||||||||| ||||||||||||||| || ||| Sbjct: 723 tgacgcaccacgtcgaggcggccaaggtgtgccgcgtcggcgtctcgccggtggacggca 782 Query: 727 -cttgctcggcttccggtgctga 748 |||||||||||||||||||| Sbjct: 783 aggtgctcggcttccggtgctga 805