BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf041l17 (1664 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 289 2e-74 emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 289 2e-74 emb|CT835522.1| Oryza sativa (indica cultivar-group) cDNA clone:... 88 1e-13 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 289 bits (146), Expect = 2e-74 Identities = 294/343 (85%), Gaps = 9/343 (2%) Strand = Plus / Minus Query: 1049 cccagcagctgcctcccaagattcgcctctcgccggcgcaagcgacggcgcccccgcccc 1108 ||||||||||||| |||||||| |||||||||||| |||| ||| | |||| ||||| | Sbjct: 25815186 cccagcagctgccacccaagatccgcctctcgccgacgcaggcgccaccgccaccgccac 25815127 Query: 1109 caccgccccctccggc---cgccgtcgccgcggacagcccccgcctcaacgccgccggca 1165 | ||||| || ||| | |||||| || || |||||||| ||||||||||| ||||||| Sbjct: 25815126 ctccgcctccgccgccgcccgccgtggcggccgacagcccgcgcctcaacgcggccggca 25815067 Query: 1166 aggtggtgttcaacgcgctcggccgcagctccagcagcccgagcagcctcgcgggcgggc 1225 |||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 25815066 aggtcgtcttcaacgggctgggccgcagctccagcagcccgagcagcctcgccggcggcc 25815007 Query: 1226 ggcgccaccgcgccggc------gccggcggtagcatcgagcggtcctactcggcgcacg 1279 | ||||||| | |||| | |||||| |||||||||| |||||||||||||||| Sbjct: 25815006 gccgccaccaccacggccgcaacggcggcggcggcatcgagcgctcctactcggcgcacg 25814947 Query: 1280 tgcgcgtggcgcccgtgctcaacgtgcccgtctgctccctccgcgggtcccgcaagtccg 1339 | ||||| || ||||| |||||||| |||||||||||||||||||| || |||||||||| Sbjct: 25814946 tccgcgtcgcccccgtcctcaacgtccccgtctgctccctccgcggctcacgcaagtccg 25814887 Query: 1340 tctccgtcttcggcatcgaccgcctcttctccccgtcctcctc 1382 |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 25814886 tctccgtcttcggcatcgaccgcctcttctccccctcctcctc 25814844 Score = 113 bits (57), Expect = 2e-21 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 532 agcgccgacttcgagttcctgctcgccgggtgctccgcggtgtccatgctcccggccgac 591 |||||||||||||||||||| |||| |||||||||| ||||| |||||||| |||||| Sbjct: 25815673 agcgccgacttcgagttcctcctcg---ggtgctccgccgtgtcgatgctccctgccgac 25815617 Query: 592 gagctcttctccggggggaagctcgtcccgctccg 626 |||||||||||||| ||||||||||| |||||||| Sbjct: 25815616 gagctcttctccggtgggaagctcgtgccgctccg 25815582 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Minus Query: 869 cgtcggagcccaagccgctccgccggctcctccgccgggggcctaagccgtcggagccgg 928 |||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| | Sbjct: 25815348 cgtccgagcccaagccgctccgccgcctccttcgccgcgggccgaagccaccggagccag 25815289 Query: 929 agccgtccctcagcctccccctcctccgcgag 960 |||| || || |||||||| |||||||||||| Sbjct: 25815288 agccatcgctgagcctcccgctcctccgcgag 25815257 Score = 85.7 bits (43), Expect = 5e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 799 aagattccagcgaggaggtggcgggatctcctccggctacggaagcagcaggcgtcgtc 857 ||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 25815436 aagatcccggcgaggcggtggcgggatctcctccggctaaggaagcagcaggcgtcgtc 25815378 Score = 79.8 bits (40), Expect = 3e-11 Identities = 80/90 (88%), Gaps = 5/90 (5%) Strand = Plus / Minus Query: 400 ccgccgccgccgcc-tccgccgccgccgcctgccccggcggcggcgatgcagtggctcag 458 |||||||||||||| ||| |||||||||| ||| |||||||||| ||||||||||| Sbjct: 25815814 ccgccgccgccgccatcctccgccgccgc-tgcgggggcggcggcg---cagtggctcag 25815759 Query: 459 cccgcgggtgtcgttcagcctcgacgacgc 488 |||| ||||||||||||||||||||||||| Sbjct: 25815758 cccgagggtgtcgttcagcctcgacgacgc 25815729 >emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 289 bits (146), Expect = 2e-74 Identities = 294/343 (85%), Gaps = 9/343 (2%) Strand = Plus / Minus Query: 1049 cccagcagctgcctcccaagattcgcctctcgccggcgcaagcgacggcgcccccgcccc 1108 ||||||||||||| |||||||| |||||||||||| |||| ||| | |||| ||||| | Sbjct: 36637 cccagcagctgccacccaagatccgcctctcgccgacgcaggcgccaccgccaccgccac 36578 Query: 1109 caccgccccctccggc---cgccgtcgccgcggacagcccccgcctcaacgccgccggca 1165 | ||||| || ||| | |||||| || || |||||||| ||||||||||| ||||||| Sbjct: 36577 ctccgcctccgccgccgcccgccgtggcggccgacagcccgcgcctcaacgcggccggca 36518 Query: 1166 aggtggtgttcaacgcgctcggccgcagctccagcagcccgagcagcctcgcgggcgggc 1225 |||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 36517 aggtcgtcttcaacgggctgggccgcagctccagcagcccgagcagcctcgccggcggcc 36458 Query: 1226 ggcgccaccgcgccggc------gccggcggtagcatcgagcggtcctactcggcgcacg 1279 | ||||||| | |||| | |||||| |||||||||| |||||||||||||||| Sbjct: 36457 gccgccaccaccacggccgcaacggcggcggcggcatcgagcgctcctactcggcgcacg 36398 Query: 1280 tgcgcgtggcgcccgtgctcaacgtgcccgtctgctccctccgcgggtcccgcaagtccg 1339 | ||||| || ||||| |||||||| |||||||||||||||||||| || |||||||||| Sbjct: 36397 tccgcgtcgcccccgtcctcaacgtccccgtctgctccctccgcggctcacgcaagtccg 36338 Query: 1340 tctccgtcttcggcatcgaccgcctcttctccccgtcctcctc 1382 |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 36337 tctccgtcttcggcatcgaccgcctcttctccccctcctcctc 36295 Score = 113 bits (57), Expect = 2e-21 Identities = 86/95 (90%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 532 agcgccgacttcgagttcctgctcgccgggtgctccgcggtgtccatgctcccggccgac 591 |||||||||||||||||||| |||| |||||||||| ||||| |||||||| |||||| Sbjct: 37124 agcgccgacttcgagttcctcctcg---ggtgctccgccgtgtcgatgctccctgccgac 37068 Query: 592 gagctcttctccggggggaagctcgtcccgctccg 626 |||||||||||||| ||||||||||| |||||||| Sbjct: 37067 gagctcttctccggtgggaagctcgtgccgctccg 37033 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Minus Query: 869 cgtcggagcccaagccgctccgccggctcctccgccgggggcctaagccgtcggagccgg 928 |||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| | Sbjct: 36799 cgtccgagcccaagccgctccgccgcctccttcgccgcgggccgaagccaccggagccag 36740 Query: 929 agccgtccctcagcctccccctcctccgcgag 960 |||| || || |||||||| |||||||||||| Sbjct: 36739 agccatcgctgagcctcccgctcctccgcgag 36708 Score = 85.7 bits (43), Expect = 5e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 799 aagattccagcgaggaggtggcgggatctcctccggctacggaagcagcaggcgtcgtc 857 ||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 36887 aagatcccggcgaggcggtggcgggatctcctccggctaaggaagcagcaggcgtcgtc 36829 Score = 79.8 bits (40), Expect = 3e-11 Identities = 80/90 (88%), Gaps = 5/90 (5%) Strand = Plus / Minus Query: 400 ccgccgccgccgcc-tccgccgccgccgcctgccccggcggcggcgatgcagtggctcag 458 |||||||||||||| ||| |||||||||| ||| |||||||||| ||||||||||| Sbjct: 37265 ccgccgccgccgccatcctccgccgccgc-tgcgggggcggcggcg---cagtggctcag 37210 Query: 459 cccgcgggtgtcgttcagcctcgacgacgc 488 |||| ||||||||||||||||||||||||| Sbjct: 37209 cccgagggtgtcgttcagcctcgacgacgc 37180 >emb|CT835522.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA003A11, full insert sequence Length = 655 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 869 cgtcggagcccaagccgctccgccggctcctccgccgggggcctaagccgtcggagccgg 928 |||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||| | Sbjct: 161 cgtccgagcccaagccgctccgccgcctccttcgccgcgggccgaagccaccggagccag 220 Query: 929 agccgtccctcagcctccccctcctccgcgag 960 |||| || || |||||||| |||||||||||| Sbjct: 221 agccatcgctgagcctcccgctcctccgcgag 252 Score = 85.7 bits (43), Expect = 5e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 799 aagattccagcgaggaggtggcgggatctcctccggctacggaagcagcaggcgtcgtc 857 ||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 73 aagatcccggcgaggcggtggcgggatctcctccggctaaggaagcagcaggcgtcgtc 131