BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf041l12 (946 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245684.1| Zea mays clone 19328 mRNA sequence 252 2e-63 gb|AY194365.1| Vitis vinifera putative 40S ribosomal protein S5 ... 244 5e-61 gb|AY498744.1| Capsicum annuum 40S ribosomal protein S5 (RpS5) m... 232 2e-57 emb|CT830459.1| Oryza sativa (indica cultivar-group) cDNA clone:... 204 5e-49 emb|CT833925.1| Oryza sativa (indica cultivar-group) cDNA clone:... 188 3e-44 >gb|DQ245684.1| Zea mays clone 19328 mRNA sequence Length = 817 Score = 252 bits (127), Expect = 2e-63 Identities = 385/471 (81%) Strand = Plus / Plus Query: 227 ttccccacactgctggaaggtattctgtgaagaggttccgcaaggctcaatgcccaattg 286 ||||||||||||||||||| || ||||||||||||||| | |||||||| ||||| || | Sbjct: 226 ttccccacactgctggaagatactctgtgaagaggttcaggaaggctcagtgccctatcg 285 Query: 287 ttgagaggatcaccaactctttgatgatgcatgggcgcaacaatggcaagaaactcatgg 346 | |||||| ||||||||||| | |||||||| ||| | ||||| || ||||| || |||| Sbjct: 286 tcgagaggctcaccaactctcttatgatgcacgggaggaacaacggtaagaagctgatgg 345 Query: 347 ctgttcgcattgtgaaacacactatggagattattcacctgctgactgatgcaaacccta 406 |||| | || | || ||| | ||||||||||| ||||| ||||||| || ||||||| Sbjct: 346 ctgtcaggatcatcaagcacgccatggagattatccacctcttgactgacgctaacccta 405 Query: 407 tccaaattattattgatgccgtcataaacagtggaccaagagaagatgcaactcgtattg 466 | || | || || |||||| | | |||||||| ||| | |||||||| || | |||| Sbjct: 406 ttcaggtcatcatcgatgccattgttaacagtggtccacgtgaagatgcgaccaggattg 465 Query: 467 gatctgctggtgccgttagaaggcaggcagttgatatttctcctttgcggcgtgtgaacc 526 |||||||||||| ||||| ||||||||||||||||| |||||| || | |||||||||| Sbjct: 466 gatctgctggtgtggttaggaggcaggcagttgatatctctcctctgagacgtgtgaacc 525 Query: 527 aggcaatctaccttcttaccactggtgctagagaaagtgctttcaggaatatcaagacca 586 | || |||| | | || ||||||||||| | ||| ||| ||||| || |||||||| | Sbjct: 526 aagccatcttcttgctcaccactggtgcacgtgaagctgcgttcagaaacatcaagacta 585 Query: 587 ttgcagaatgcctcgcagatgagcttatcaacgcagctaaaggatcttctaacagctatg 646 | || || ||||| || |||||||| ||||| || |||||||||||||| |||||||||| Sbjct: 586 tcgctgagtgccttgcggatgagctcatcaatgctgctaaaggatcttccaacagctatg 645 Query: 647 caatcaagaagaaggatgagattgaacgtgttgccaaggctaaccgttaag 697 | ||||||||||||||||||||||| | ||||| ||||| |||||||||| Sbjct: 646 ccatcaagaagaaggatgagattgagagagttgctaaggccaaccgttaag 696 >gb|AY194365.1| Vitis vinifera putative 40S ribosomal protein S5 (Rps5) mRNA, partial cds Length = 661 Score = 244 bits (123), Expect = 5e-61 Identities = 369/451 (81%) Strand = Plus / Plus Query: 244 aggtattctgtgaagaggttccgcaaggctcaatgcccaattgttgagaggatcaccaac 303 ||||| ||||| ||| ||||| | || || |||||||||||||| |||||| |||| || Sbjct: 6 aggtactctgtcaagcggttcagaaaagcccaatgcccaattgtggagaggctcacaaat 65 Query: 304 tctttgatgatgcatgggcgcaacaatggcaagaaactcatggctgttcgcattgtgaaa 363 ||| |||||||||| ||||| |||||||| ||||| || ||||||||| | ||| ||||| Sbjct: 66 tctctgatgatgcacgggcggaacaatggaaagaagctgatggctgttaggattatgaaa 125 Query: 364 cacactatggagattattcacctgctgactgatgcaaaccctatccaaattattattgat 423 || | ||||| ||||||||| || |||||||| || || |||||| ||||| ||||| Sbjct: 126 catgccatggaaattattcacttgttgactgatcagaatcccatccaagttattgttgat 185 Query: 424 gccgtcataaacagtggaccaagagaagatgcaactcgtattggatctgctggtgccgtt 483 || ||||| |||||||||||||||||||||||||| |||||||| |||||||| | ||| Sbjct: 186 gctgtcatcaacagtggaccaagagaagatgcaacacgtattggctctgctggcgttgtt 245 Query: 484 agaaggcaggcagttgatatttctcctttgcggcgtgtgaaccaggcaatctaccttctt 543 ||| | || || |||||||| ||||||||| ||||||| || || || || || || || Sbjct: 246 agacgacaagctgttgatatctctcctttgaggcgtgtcaatcaagctatttatctgctc 305 Query: 544 accactggtgctagagaaagtgctttcaggaatatcaagaccattgcagaatgcctcgca 603 || ||||||||| | || ||| |||||||| |||||||| || || |||||| | || Sbjct: 306 actactggtgctcgcgagtctgcattcaggaacatcaagacaatagctgaatgcttggcc 365 Query: 604 gatgagcttatcaacgcagctaaaggatcttctaacagctatgcaatcaagaagaaggat 663 ||||| || || |||||||| || || || || |||||||| || |||||||| |||||| Sbjct: 366 gatgaactcattaacgcagcaaagggttcatccaacagctacgccatcaagaaaaaggat 425 Query: 664 gagattgaacgtgttgccaaggctaaccgtt 694 | |||||| || ||||||||||||||||||| Sbjct: 426 gggattgagcgagttgccaaggctaaccgtt 456 >gb|AY498744.1| Capsicum annuum 40S ribosomal protein S5 (RpS5) mRNA, complete cds Length = 853 Score = 232 bits (117), Expect = 2e-57 Identities = 351/429 (81%) Strand = Plus / Plus Query: 268 aaggctcaatgcccaattgttgagaggatcaccaactctttgatgatgcatgggcgcaac 327 |||||||| |||||||||||||||||| ||||||| ||| | ||||||||||| | ||| Sbjct: 249 aaggctcagtgcccaattgttgagaggctcaccaattctctcatgatgcatggtaggaac 308 Query: 328 aatggcaagaaactcatggctgttcgcattgtgaaacacactatggagattattcacctg 387 || || ||||| || ||||||||||||||| | || || | |||||||| ||||| || Sbjct: 309 aacgggaagaagctgatggctgttcgcattattaagcatgcaatggagatcattcatttg 368 Query: 388 ctgactgatgcaaaccctatccaaattattattgatgccgtcataaacagtggaccaaga 447 |||| || |||||| || ||| | ||| ||||||| || || |||||||| ||||| Sbjct: 369 ttgacagaccaaaacccaattcaagtcattgttgatgctgttatcaacagtgggccaagg 428 Query: 448 gaagatgcaactcgtattggatctgctggtgccgttagaaggcaggcagttgatatttct 507 |||||||| ||||||||||| || ||||||| || ||| | || || || ||||||||| Sbjct: 429 gaagatgctactcgtattggttcagctggtgttgtcagacgtcaagctgtggatatttct 488 Query: 508 cctttgcggcgtgtgaaccaggcaatctaccttcttaccactggtgctagagaaagtgct 567 || | || ||||| |||||||||||||| | || || ||||||||| | || |||||| Sbjct: 489 ccccttcgccgtgttaaccaggcaatctatttgctgacaactggtgctcgtgagagtgct 548 Query: 568 ttcaggaatatcaagaccattgcagaatgcctcgcagatgagcttatcaacgcagctaaa 627 |||||||| |||||||||||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 549 ttcaggaacatcaagaccattgctgaatgccttgctgatgaactcatcaatgctgctaaa 608 Query: 628 ggatcttctaacagctatgcaatcaagaagaaggatgagattgaacgtgttgccaaggct 687 || ||||| || |||||||| || ||||||||||||||||||||| | ||||| ||||| Sbjct: 609 ggttcttcaaatagctatgccattaagaagaaggatgagattgaaagggttgcgaaggcc 668 Query: 688 aaccgttaa 696 || |||||| Sbjct: 669 aatcgttaa 677 >emb|CT830459.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130P04, full insert sequence Length = 952 Score = 204 bits (103), Expect = 5e-49 Identities = 457/575 (79%) Strand = Plus / Plus Query: 120 gcaggagatcaaactcttcaaccgctggtccttcgaggacgtccaggtcaatgacatttc 179 ||||||| |||| ||||||| ||||||||||||||||||||||||||| || ||||| || Sbjct: 129 gcaggaggtcaagctcttcagccgctggtccttcgaggacgtccaggtgaacgacatctc 188 Query: 180 tttgaatgattaccttgctgtcaatcctacaaagcatgccacatatcttccccacactgc 239 || || ||||| || || || || || ||||| || || || || || ||||| || Sbjct: 189 gctggcggactacctggcggtgaacccgacgaagcacgcgacgtacctgccgcacacggc 248 Query: 240 tggaaggtattctgtgaagaggttccgcaaggctcaatgcccaattgttgagaggatcac 299 || ||||| || | |||||||||||| ||||| || ||||| ||||| ||| | | || Sbjct: 249 ggggaggtactcggcgaagaggttccggaaggcgcagtgccccattgtggagcgcctgac 308 Query: 300 caactctttgatgatgcatgggcgcaacaatggcaagaaactcatggctgttcgcattgt 359 |||||| | |||||||| || |||||||| || ||||| ||||||| || ||||| || Sbjct: 309 caactcgctcatgatgcacggccgcaacaacgggaagaagatcatggccgtgcgcatcgt 368 Query: 360 gaaacacactatggagattattcacctgctgactgatgcaaaccctatccaaattattat 419 || ||| | |||||||| || ||||| || || || || ||||| || || | || | Sbjct: 369 caagcacgccatggagatcatccacctcctcaccgacgccaaccccattcaggtcatcgt 428 Query: 420 tgatgccgtcataaacagtggaccaagagaagatgcaactcgtattggatctgctggtgc 479 || ||| |||| |||||||| || | || ||||| || |||||||| ||||| ||||| Sbjct: 429 cgacgccatcatcaacagtggccctcgtgaggatgcgacccgtattgggtctgcgggtgc 488 Query: 480 cgttagaaggcaggcagttgatatttctcctttgcggcgtgtgaaccaggcaatctacct 539 || || |||||||| || ||||| ||||| ||| || | || ||||||||||||||||| Sbjct: 489 tgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatctacct 548 Query: 540 tcttaccactggtgctagagaaagtgctttcaggaatatcaagaccattgcagaatgcct 599 || ||||||||||| || || || || |||||||| |||||||||||||| || ||||| Sbjct: 549 cctcaccactggtgccagggagagcgccttcaggaacatcaagaccattgctgagtgcct 608 Query: 600 cgcagatgagcttatcaacgcagctaaaggatcttctaacagctatgcaatcaagaagaa 659 || || |||||||| || || || || || || || ||||||||||| ||||||||||| Sbjct: 609 tgctgacgagcttattaatgccgccaagggctcatccaacagctatgccatcaagaagaa 668 Query: 660 ggatgagattgaacgtgttgccaaggctaaccgtt 694 ||||||||| || |||||||||||||| ||||||| Sbjct: 669 ggatgagatcgagcgtgttgccaaggccaaccgtt 703 >emb|CT833925.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042M23, full insert sequence Length = 869 Score = 188 bits (95), Expect = 3e-44 Identities = 323/399 (80%) Strand = Plus / Plus Query: 296 tcaccaactctttgatgatgcatgggcgcaacaatggcaagaaactcatggctgttcgca 355 |||||||||| | |||||||| || |||||||| |||||||| |||||||||| |||| Sbjct: 286 tcaccaactccctcatgatgcacggccgcaacaacggcaagaagatcatggctgtccgca 345 Query: 356 ttgtgaaacacactatggagattattcacctgctgactgatgcaaaccctatccaaatta 415 | || || ||| | |||||||| || ||||| || || || || ||||| ||||| | | Sbjct: 346 tcgtcaagcacgccatggagatcatccacctcctcaccgacgccaaccccatccaggtca 405 Query: 416 ttattgatgccgtcataaacagtggaccaagagaagatgcaactcgtattggatctgctg 475 | | |||||| |||| ||||| || || | || || ||||| ||||| || ||||||| Sbjct: 406 tcgtagatgccatcatcaacagcggcccgcgtgaggacgcaacccgtatcggctctgctg 465 Query: 476 gtgccgttagaaggcaggcagttgatatttctcctttgcggcgtgtgaaccaggcaatct 535 | || || || |||||||| || ||||| ||||| ||| || | || ||||||||||||| Sbjct: 466 gcgctgtgaggaggcaggctgtggatatctctcccttgaggagggtcaaccaggcaatct 525 Query: 536 accttcttaccactggtgctagagaaagtgctttcaggaatatcaagaccattgcagaat 595 |||| || |||||||| || || || ||||| || ||||| |||||||||||||| || | Sbjct: 526 acctcctcaccactggcgccagggagagtgcctttaggaacatcaagaccattgctgagt 585 Query: 596 gcctcgcagatgagcttatcaacgcagctaaaggatcttctaacagctatgcaatcaaga 655 |||| || |||||||| ||||| || || || || || || ||||||||||| ||||||| Sbjct: 586 gccttgctgatgagctcatcaatgccgccaagggctcatccaacagctatgccatcaaga 645 Query: 656 agaaggatgagattgaacgtgttgccaaggctaaccgtt 694 |||||||||||||||| |||||||||||||| ||||||| Sbjct: 646 agaaggatgagattgagcgtgttgccaaggcgaaccgtt 684