BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf041e15 (1702 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063769.1| Oryza sativa (japonica cultivar-group) Os06g... 305 3e-79 emb|CT835373.1| Oryza sativa (indica cultivar-group) cDNA clone:... 262 4e-66 ref|NM_001054625.1| Oryza sativa (japonica cultivar-group) Os02g... 262 4e-66 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 >ref|NM_001063769.1| Oryza sativa (japonica cultivar-group) Os06g0233800 (Os06g0233800) mRNA, complete cds Length = 1116 Score = 305 bits (154), Expect = 3e-79 Identities = 228/252 (90%), Gaps = 3/252 (1%) Strand = Plus / Plus Query: 293 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 352 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 60 Query: 353 ctatgcaccagcg---acgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 409 || |||||||||| ||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 61 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 120 Query: 410 aggaactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagagga 469 | |||||||||||||| |||||||||||||| |||||||| || |||||||| |||||| Sbjct: 121 cgcaactaccctcccccaaaatgggatctccccggtggggcatacgacaggacaagagga 180 Query: 470 aacaggaggaactggatcctggcatgggaggatggattctgcaacttcgcagccacctct 529 |||||||||||||||||| |||| |||||||| || |||||||||||||| |||||||| Sbjct: 181 aacaggaggaactggatcttggcgtgggaggacgggttctgcaacttcgcggccacctcc 240 Query: 530 ggagcctgcggc 541 | ||||||||| Sbjct: 241 gccgcctgcggc 252 Score = 291 bits (147), Expect = 5e-75 Identities = 180/191 (94%) Strand = Plus / Plus Query: 961 catccgaggacatgggaggctcagttccagtctggtatccagaccatcgctctgatcgct 1020 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 487 catccgaggacatgggaggcgcagttccagtctggtatccagaccatcgccctgatcgct 546 Query: 1021 gtcagagaaggcgttgtacagctcggctccatgaaaaaggtggcggaggacctgagctac 1080 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gtcagagaaggcgtcgtgcagctcggctccatgaaaaaggtggcggaggacctgagctac 606 Query: 1081 gtggtgacgctgcgccgcaagttcagctacctggagagcatcccgggggtgctgctgccg 1140 |||||| ||||||| || |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 607 gtggtggcgctgcggcggaagttcgggtacctggagagcatcccgggtgtgctgctgcca 666 Query: 1141 cacccgtcgtc 1151 ||||||||||| Sbjct: 667 cacccgtcgtc 677 Score = 242 bits (122), Expect = 4e-60 Identities = 149/158 (94%) Strand = Plus / Plus Query: 614 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 673 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 322 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 381 Query: 674 ttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccaggag 733 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 382 ttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcaggag 441 Query: 734 cacgagatcaacctcatttcctcctggaccaaccctgc 771 || |||||||||||||| |||||||||| ||||||||| Sbjct: 442 caagagatcaacctcatctcctcctggaacaaccctgc 479 Score = 131 bits (66), Expect = 1e-26 Identities = 75/78 (96%) Strand = Plus / Plus Query: 1284 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1343 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 866 Query: 1344 gccctcggtcgtgccggc 1361 |||||| ||||||||||| Sbjct: 867 gccctccgtcgtgccggc 884 >emb|CT835373.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI227K23, full insert sequence Length = 1562 Score = 262 bits (132), Expect = 4e-66 Identities = 180/196 (91%) Strand = Plus / Plus Query: 961 catccgaggacatgggaggctcagttccagtctggtatccagaccatcgctctgatcgct 1020 ||||| ||||||||||| |||||||||||||| |||||| ||||||| ||||||||||| Sbjct: 788 catccaaggacatgggaagctcagttccagtccggtatcaagaccattgctctgatcgcc 847 Query: 1021 gtcagagaaggcgttgtacagctcggctccatgaaaaaggtggcggaggacctgagctac 1080 ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 848 gtcagagaaggcgttgtacagttaggctccatgaagaaggtggcggaggacctgagctac 907 Query: 1081 gtggtgacgctgcgccgcaagttcagctacctggagagcatcccgggggtgctgctgccg 1140 |||||| ||||||| || |||||| | |||||||||||||||||||| |||||||||||| Sbjct: 908 gtggtggcgctgcggcggaagttcgggtacctggagagcatcccgggcgtgctgctgccg 967 Query: 1141 cacccgtcgtccgccg 1156 ||||||||||| |||| Sbjct: 968 cacccgtcgtcggccg 983 Score = 218 bits (110), Expect = 6e-53 Identities = 203/234 (86%) Strand = Plus / Plus Query: 290 gcaatggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcgg 349 ||||||||||||||||||| ||| |||| ||||| || || ||||||||||||||||| Sbjct: 314 gcaatggaggagcagctgaacccactggctgtgacacagctactgcagcacacgctgcgc 373 Query: 350 agcctatgcaccagcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 409 |||| |||||| | || | | |||||||| ||||||||||||||||| |||||||| Sbjct: 374 ggcctctgcacccaaggcgactcccagtgggtgtacgccgtcttctggcgaatcctccca 433 Query: 410 aggaactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagagga 469 || ||||||||||| || ||||||||||| | ||||| | ||||||||||| |||||| Sbjct: 434 agaaactaccctcctccaaaatgggatcttcagggtggtgtttatgacaggagtagagga 493 Query: 470 aacaggaggaactggatcctggcatgggaggatggattctgcaacttcgcagcc 523 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 494 aacaggaggaactggatcctggcatgggaggatggattctgcaactttgcagcc 547 Score = 159 bits (80), Expect = 5e-35 Identities = 140/160 (87%) Strand = Plus / Plus Query: 612 agggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaag 671 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 621 agggcctccagcctgagctcttcttcaagatgtcccatgacatctacaactatggggaag 680 Query: 672 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 731 ||||| | |||||||| || || ||||| ||||||||||||||| | ||||| || | | Sbjct: 681 ggttggttgggaaagttgcagctgaccatggccacaagtgggtgtcccaggaggccaatg 740 Query: 732 agcacgagatcaacctcatttcctcctggaccaaccctgc 771 |||||||||||||||| || |||| |||| ||||||||| Sbjct: 741 agcacgagatcaacctggttacctcatggaacaaccctgc 780 >ref|NM_001054625.1| Oryza sativa (japonica cultivar-group) Os02g0742700 (Os02g0742700) mRNA, complete cds Length = 1011 Score = 262 bits (132), Expect = 4e-66 Identities = 180/196 (91%) Strand = Plus / Plus Query: 961 catccgaggacatgggaggctcagttccagtctggtatccagaccatcgctctgatcgct 1020 ||||| ||||||||||| |||||||||||||| |||||| ||||||| ||||||||||| Sbjct: 472 catccaaggacatgggaagctcagttccagtccggtatcaagaccattgctctgatcgcc 531 Query: 1021 gtcagagaaggcgttgtacagctcggctccatgaaaaaggtggcggaggacctgagctac 1080 ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 532 gtcagagaaggcgttgtacagttaggctccatgaagaaggtggcggaggacctgagctac 591 Query: 1081 gtggtgacgctgcgccgcaagttcagctacctggagagcatcccgggggtgctgctgccg 1140 |||||| ||||||| || |||||| | |||||||||||||||||||| |||||||||||| Sbjct: 592 gtggtggcgctgcggcggaagttcgggtacctggagagcatcccgggcgtgctgctgccg 651 Query: 1141 cacccgtcgtccgccg 1156 ||||||||||| |||| Sbjct: 652 cacccgtcgtcggccg 667 Score = 212 bits (107), Expect = 3e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 293 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 352 |||||||||||||||| ||| |||| ||||| || || ||||||||||||||||| || Sbjct: 1 atggaggagcagctgaacccactggctgtgacacagctactgcagcacacgctgcgcggc 60 Query: 353 ctatgcaccagcgacgccacgcagtgggtctacgccgtcttctggcgcatcctccccagg 412 || |||||| | || | | |||||||| ||||||||||||||||| |||||||| || Sbjct: 61 ctctgcacccaaggcgactcccagtgggtgtacgccgtcttctggcgaatcctcccaaga 120 Query: 413 aactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagaggaaac 472 ||||||||||| || ||||||||||| | ||||| | ||||||||||| ||||||||| Sbjct: 121 aactaccctcctccaaaatgggatcttcagggtggtgtttatgacaggagtagaggaaac 180 Query: 473 aggaggaactggatcctggcatgggaggatggattctgcaacttcgcagcc 523 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 aggaggaactggatcctggcatgggaggatggattctgcaactttgcagcc 231 Score = 159 bits (80), Expect = 5e-35 Identities = 140/160 (87%) Strand = Plus / Plus Query: 612 agggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaag 671 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 305 agggcctccagcctgagctcttcttcaagatgtcccatgacatctacaactatggggaag 364 Query: 672 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 731 ||||| | |||||||| || || ||||| ||||||||||||||| | ||||| || | | Sbjct: 365 ggttggttgggaaagttgcagctgaccatggccacaagtgggtgtcccaggaggccaatg 424 Query: 732 agcacgagatcaacctcatttcctcctggaccaaccctgc 771 |||||||||||||||| || |||| |||| ||||||||| Sbjct: 425 agcacgagatcaacctggttacctcatggaacaaccctgc 464 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 180 bits (91), Expect = 1e-41 Identities = 126/137 (91%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 293 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 352 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6966618 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 6966559 Query: 353 ctatgcacca---gcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 409 || ||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 6966558 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 6966499 Query: 410 aggaactaccctccccc 426 | |||||||||||||| Sbjct: 6966498 cgcaactaccctccccc 6966482 Score = 155 bits (78), Expect = 7e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 672 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 731 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 6965945 ggttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcagg 6965886 Query: 732 agcacgagatcaacctcatttcctcctggaccaaccctgctgactctgta 781 |||| |||||||||||||| |||||||||| ||||||||| || |||||| Sbjct: 6965885 agcaagagatcaacctcatctcctcctggaacaaccctgccgattctgta 6965836 Score = 131 bits (66), Expect = 1e-26 Identities = 75/78 (96%) Strand = Plus / Minus Query: 1284 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1343 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6965024 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 6964965 Query: 1344 gccctcggtcgtgccggc 1361 |||||| ||||||||||| Sbjct: 6964964 gccctccgtcgtgccggc 6964947 Score = 131 bits (66), Expect = 1e-26 Identities = 87/94 (92%) Strand = Plus / Minus Query: 1058 aggtggcggaggacctgagctacgtggtgacgctgcgccgcaagttcagctacctggaga 1117 ||||||||||||||||||||||||||||| ||||||| || |||||| | |||||||||| Sbjct: 6965247 aggtggcggaggacctgagctacgtggtggcgctgcggcggaagttcgggtacctggaga 6965188 Query: 1118 gcatcccgggggtgctgctgccgcacccgtcgtc 1151 |||||||||| ||||||||||| ||||||||||| Sbjct: 6965187 gcatcccgggtgtgctgctgccacacccgtcgtc 6965154 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 1000 cagaccatcgctctgatcgctgtcagagaaggcgttgtacagctcggctccatgaaaaag 1059 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 6965491 cagaccatcgccctgatcgctgtcagagaaggcgtcgtgcagctcggctccatgaaaaag 6965432 Query: 1060 gtg 1062 ||| Sbjct: 6965431 gtg 6965429 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 614 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 673 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 6966077 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 6966018 Query: 674 t 674 | Sbjct: 6966017 t 6966017 Score = 89.7 bits (45), Expect = 3e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 954 tttgcagcatccgaggacatgggaggctcagttccagtctggtatccag 1002 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 6965728 tttgcagcatccgaggacatgggaggcgcagttccagtctggtatccag 6965680 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 425 cccaaatgggatctcccaggtggggcttatgacaggaccagaggaaacaggaggaactgg 484 |||| |||||||||||| |||||||| || |||||||| ||||||||||||||||||||| Sbjct: 6966366 cccagatgggatctccccggtggggcatacgacaggacaagaggaaacaggaggaactgg 6966307 >dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 180 bits (91), Expect = 1e-41 Identities = 126/137 (91%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 293 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 352 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26045 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 25986 Query: 353 ctatgcacca---gcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 409 || ||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 25985 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 25926 Query: 410 aggaactaccctccccc 426 | |||||||||||||| Sbjct: 25925 cgcaactaccctccccc 25909 Score = 155 bits (78), Expect = 7e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 672 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 731 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 25372 ggttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcagg 25313 Query: 732 agcacgagatcaacctcatttcctcctggaccaaccctgctgactctgta 781 |||| |||||||||||||| |||||||||| ||||||||| || |||||| Sbjct: 25312 agcaagagatcaacctcatctcctcctggaacaaccctgccgattctgta 25263 Score = 131 bits (66), Expect = 1e-26 Identities = 75/78 (96%) Strand = Plus / Minus Query: 1284 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1343 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24451 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 24392 Query: 1344 gccctcggtcgtgccggc 1361 |||||| ||||||||||| Sbjct: 24391 gccctccgtcgtgccggc 24374 Score = 131 bits (66), Expect = 1e-26 Identities = 87/94 (92%) Strand = Plus / Minus Query: 1058 aggtggcggaggacctgagctacgtggtgacgctgcgccgcaagttcagctacctggaga 1117 ||||||||||||||||||||||||||||| ||||||| || |||||| | |||||||||| Sbjct: 24674 aggtggcggaggacctgagctacgtggtggcgctgcggcggaagttcgggtacctggaga 24615 Query: 1118 gcatcccgggggtgctgctgccgcacccgtcgtc 1151 |||||||||| ||||||||||| ||||||||||| Sbjct: 24614 gcatcccgggtgtgctgctgccacacccgtcgtc 24581 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 1000 cagaccatcgctctgatcgctgtcagagaaggcgttgtacagctcggctccatgaaaaag 1059 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 24918 cagaccatcgccctgatcgctgtcagagaaggcgtcgtgcagctcggctccatgaaaaag 24859 Query: 1060 gtg 1062 ||| Sbjct: 24858 gtg 24856 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 614 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 673 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 25504 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 25445 Query: 674 t 674 | Sbjct: 25444 t 25444 Score = 89.7 bits (45), Expect = 3e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 954 tttgcagcatccgaggacatgggaggctcagttccagtctggtatccag 1002 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 25155 tttgcagcatccgaggacatgggaggcgcagttccagtctggtatccag 25107 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 425 cccaaatgggatctcccaggtggggcttatgacaggaccagaggaaacaggaggaactgg 484 |||| |||||||||||| |||||||| || |||||||| ||||||||||||||||||||| Sbjct: 25793 cccagatgggatctccccggtggggcatacgacaggacaagaggaaacaggaggaactgg 25734