BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf040i22 (1055 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL... 274 7e-70 gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 159 3e-35 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-35 ref|NM_001057706.1| Oryza sativa (japonica cultivar-group) Os03g... 153 2e-33 emb|AJ234884.1|HVU234884 Hordeum vulgare genomic DNA fragment; c... 131 6e-27 >gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 274 bits (138), Expect = 7e-70 Identities = 257/296 (86%), Gaps = 3/296 (1%) Strand = Plus / Minus Query: 280 gcatcaacaaccgctgtagtctctaaaggagaaccggccgctgccgtcgggccccgcgtt 339 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 12683 gcatcaacaaccattgtagtctctcaaggagaaccggccgctgccgtccggcccctggtt 12624 Query: 340 gcccgcgcccgcgtgctgcaggcccagcgtcagcgacacgtcgccggccgccgcgccggt 399 ||| ||||| |||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 12623 gccggcgccggcgtgctgcaggcccagcgtaagggacacgtcgccggagaccgcgccggt 12564 Query: 400 cgtggcgggcccgtaccgcaccctgacccctggctcgaaccgcccgtacaagtcgtccgc 459 ||||||||||||||||| || ||| ||||| |||||||||| |||||||| |||||| || Sbjct: 12563 cgtggcgggcccgtacctcatcctcaccccgggctcgaacctcccgtacaggtcgtcggc 12504 Query: 460 ggcgccgacgtgcgcgtcgccgccgaggagatccaccgggtcgaggccgacgaaggcgga 519 ||| || ||||||||||||||||| ||||| ||| ||||||| || ||||||||||||| Sbjct: 12503 ggcacccacgtgcgcgtcgccgccaaggagctccgccgggtcaagaccgacgaaggcggc 12444 Query: 520 gtcggccgctgagggccccgcgacgccggggtcaggcttgtgggggaggacgccgg 575 ||| ||| | || ||||||| |||||||||| |||| |||||| ||||||||| Sbjct: 12443 gtccgccacggatggccccg---cgccggggtcgagcttatgggggtggacgccgg 12391 Score = 240 bits (121), Expect = 9e-60 Identities = 266/313 (84%), Gaps = 21/313 (6%) Strand = Plus / Minus Query: 635 tgctgcgcgccggtggtcgtcggggagtgcgtgtcatcggcgccggaggggtcgttgccg 694 ||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||| Sbjct: 12334 tgctgcgagccggtggtcgtcggggagtgcaagtcgtcggcgccagaggggtcgttgccg 12275 Query: 695 gattcgggccctc---------cgccggcggcggcggcggc---ggagccctccagctcc 742 || |||||||| | ||||| || |||||||||| ||||||||| |||||| Sbjct: 12274 gactcgggcccgcccacgccgccgccgccgccggcggcggcggaggagccctcgagctcc 12215 Query: 743 ttggattcctgctggtacatctcctcgatcatgggcttccacagccggacacgggcattg 802 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 12214 ttggtctcctgctggtacatctcctcgatcatgggcttccacagccggacgcgggcgttg 12155 Query: 803 atgaaccaattggagacctggagttgatgcaaagg----caaacaaaggaattattgcag 858 ||||||||||| |||||||||||||||| |||||| || |||| |||||||||||| Sbjct: 12154 atgaaccaattcgagacctggagttgatccaaaggaaattaaccaaacgaattattgcag 12095 Query: 859 ggaccgatagggtccat-gggcaatggcgccatgcgtgcatgcatgcatg----tgtgca 913 | | | ||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 12094 gcatagggagggtccatagagcaatggcgccatgcgtgcatgcatgcatgcatctgtgca 12035 Query: 914 gggacgtgtaggg 926 | ||||||||||| Sbjct: 12034 gcgacgtgtaggg 12022 Score = 97.6 bits (49), Expect = 9e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 11 tccttaaccccccaacaataatgcctagcaaaaggaattaatctagctaaattaagaatc 70 |||||| |||||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct: 12965 tccttagccccccaacaataatgcctaacgaaaggaattaacctagctaaattaagaatc 12906 Query: 71 atctg 75 ||||| Sbjct: 12905 atctg 12901 >gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 159 bits (80), Expect = 3e-35 Identities = 104/112 (92%) Strand = Plus / Plus Query: 282 atcaacaaccgctgtagtctctaaaggagaaccggccgctgccgtcgggccccgcgttgc 341 |||| ||||| |||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 50203 atcagcaaccactgtagtctcgcaaggagaagcggccgctgccgtcgggcccggcgttgc 50262 Query: 342 ccgcgcccgcgtgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 393 | ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50263 cggcgccggcgtgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 50314 Score = 147 bits (74), Expect = 1e-31 Identities = 98/106 (92%) Strand = Plus / Plus Query: 717 cggcggcggcggagccctccagctccttggattcctgctggtacatctcctcgatcatgg 776 ||||| ||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50653 cggcgccggaggagccctcgagctccttgcattcttgctggtacatctcctcgatcatgg 50712 Query: 777 gcttccacagccggacacgggcattgatgaaccaattggagacctg 822 ||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 50713 gcttccatagccggacacgggcgttgatgaaccaattcgagacctg 50758 Score = 123 bits (62), Expect = 2e-24 Identities = 117/131 (89%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 1 atacaaattatccttaaccccccaacaataatgcct-agcaaaaggaattaatctagcta 59 |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| Sbjct: 49857 atacaaattatccttaaccccccaacaataatgcctaaactaaaggaattaatctagcta 49916 Query: 60 aattaagaatcatc-tgggaagaagaaggagaaatttgtctcatattaatatat---ccc 115 |||||||||||||| ||| || ||||||||| | || |||||||||||||| | ||| Sbjct: 49917 aattaagaatcatcttggaaaaaagaaggag--agttctctcatattaatatttctcccc 49974 Query: 116 atcccatgcat 126 ||||||||||| Sbjct: 49975 atcccatgcat 49985 Score = 79.8 bits (40), Expect = 2e-11 Identities = 56/61 (91%), Gaps = 4/61 (6%) Strand = Plus / Plus Query: 873 catgggcaatggcgccatgcgtgca----tgcatgcatgtgtgcagggacgtgtagggct 928 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 50864 catgggcaatggcgccattcgtgcatgcatgcatgcatgtgtgcagggacgtgtagggct 50923 Query: 929 a 929 | Sbjct: 50924 a 50924 Score = 77.8 bits (39), Expect = 8e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 645 cggtggtcgtcggggagtgcgtgtcatcggcgccggaggggtcgttgccgg 695 ||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 50605 cggtggtcgtcggcgagtgcgtgtcgtcggcgccggaggggtcgtcgccgg 50655 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 159 bits (80), Expect = 3e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 282 atcaacaaccgctgtagtctctaaaggagaaccggccgctgccgtcgggccccgcgttgc 341 |||| ||||| |||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct: 29812596 atcagcaaccactgtagtctcgcaaggagaagcggccgctgccgtcgggcccggcgttgc 29812537 Query: 342 ccgcgcccgcgtgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 393 | ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29812536 cggcgccggcgtgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 29812485 Score = 147 bits (74), Expect = 1e-31 Identities = 98/106 (92%) Strand = Plus / Minus Query: 717 cggcggcggcggagccctccagctccttggattcctgctggtacatctcctcgatcatgg 776 ||||| ||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 29812146 cggcgccggaggagccctcgagctccttgcattcttgctggtacatctcctcgatcatgg 29812087 Query: 777 gcttccacagccggacacgggcattgatgaaccaattggagacctg 822 ||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 29812086 gcttccatagccggacacgggcgttgatgaaccaattcgagacctg 29812041 Score = 123 bits (62), Expect = 2e-24 Identities = 117/131 (89%), Gaps = 7/131 (5%) Strand = Plus / Minus Query: 1 atacaaattatccttaaccccccaacaataatgcct-agcaaaaggaattaatctagcta 59 |||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| Sbjct: 29812942 atacaaattatccttaaccccccaacaataatgcctaaactaaaggaattaatctagcta 29812883 Query: 60 aattaagaatcatc-tgggaagaagaaggagaaatttgtctcatattaatatat---ccc 115 |||||||||||||| ||| || ||||||||| | || |||||||||||||| | ||| Sbjct: 29812882 aattaagaatcatcttggaaaaaagaaggag--agttctctcatattaatatttctcccc 29812825 Query: 116 atcccatgcat 126 ||||||||||| Sbjct: 29812824 atcccatgcat 29812814 Score = 79.8 bits (40), Expect = 2e-11 Identities = 56/61 (91%), Gaps = 4/61 (6%) Strand = Plus / Minus Query: 873 catgggcaatggcgccatgcgtgcatgcatgcatg----tgtgcagggacgtgtagggct 928 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 29811935 catgggcaatggcgccattcgtgcatgcatgcatgcatgtgtgcagggacgtgtagggct 29811876 Query: 929 a 929 | Sbjct: 29811875 a 29811875 Score = 77.8 bits (39), Expect = 8e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 645 cggtggtcgtcggggagtgcgtgtcatcggcgccggaggggtcgttgccgg 695 ||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 29812194 cggtggtcgtcggcgagtgcgtgtcgtcggcgccggaggggtcgtcgccgg 29812144 >ref|NM_001057706.1| Oryza sativa (japonica cultivar-group) Os03g0732800 (Os03g0732800) mRNA, complete cds Length = 975 Score = 153 bits (77), Expect = 2e-33 Identities = 95/101 (94%) Strand = Plus / Minus Query: 293 ctgtagtctctaaaggagaaccggccgctgccgtcgggccccgcgttgcccgcgcccgcg 352 |||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 554 ctgtagtctcgcaaggagaagcggccgctgccgtcgggcccggcgttgccggcgccggcg 495 Query: 353 tgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 393 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tgctgcaggcccagcgtcagcgacacgtcgccggccgccgc 454 Score = 147 bits (74), Expect = 1e-31 Identities = 98/106 (92%) Strand = Plus / Minus Query: 717 cggcggcggcggagccctccagctccttggattcctgctggtacatctcctcgatcatgg 776 ||||| ||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 115 cggcgccggaggagccctcgagctccttgcattcttgctggtacatctcctcgatcatgg 56 Query: 777 gcttccacagccggacacgggcattgatgaaccaattggagacctg 822 ||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 55 gcttccatagccggacacgggcgttgatgaaccaattcgagacctg 10 Score = 77.8 bits (39), Expect = 8e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 645 cggtggtcgtcggggagtgcgtgtcatcggcgccggaggggtcgttgccgg 695 ||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 163 cggtggtcgtcggcgagtgcgtgtcgtcggcgccggaggggtcgtcgccgg 113 >emb|AJ234884.1|HVU234884 Hordeum vulgare genomic DNA fragment; clone MWG2299.rev Length = 161 Score = 131 bits (66), Expect = 6e-27 Identities = 136/159 (85%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 361 gcccagcgtcagcgacacgtcgccggccgccgcgccggtcgtggcgggcccgtaccgcac 420 ||||||||| || ||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 1 gcccagcgtaagggacacgtcgccggagaccgcgccggtcgtggcgggcccgtacctcat 60 Query: 421 cctgacccctggctcgaaccgcccgtacaagtcgtccgcggcgccgacgtgcgcgtcgcc 480 ||| ||||| |||||||||| |||||||| |||||| ||||| || |||||||||| | Sbjct: 61 cctcaccccgggctcgaacctcccgtacaggtcgtcggcggcacccacgtgcgcgtnnnc 120 Query: 481 gccgaggagatccacc-gggtcgaggccgacgaaggcgg 518 ||| ||||| ||| || ||||| || ||||||||||||| Sbjct: 121 gccaaggagctccgccggggtcaagaccgacgaaggcgg 159