BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf040i20 (912 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241571.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 595 e-166 ref|NM_001073344.1| Oryza sativa (japonica cultivar-group) Os12g... 274 6e-70 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 202 2e-48 emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 202 2e-48 >dbj|AK241571.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065179M03, full insert sequence Length = 949 Score = 595 bits (300), Expect = e-166 Identities = 450/500 (90%) Strand = Plus / Plus Query: 260 ggagggggaccccgaagcgagcaccgacgtcgcaggaggcgccgccacctccacgcggcc 319 ||||||||||||||| || | || |||||||| || |||||||| || || |||||||| Sbjct: 274 ggagggggaccccgaggccgggacggacgtcgccggcggcgccgcgacgtcgacgcggcc 333 Query: 320 gccctactcgctcatctccgaggccaacgtgcagaaggcgttgcgcggcctcgcaattac 379 ||| |||||||||||||||| | |||||||||||||||| |||||||||||||||| || Sbjct: 334 gccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcctcgcaatcac 393 Query: 380 agatgctgatcactatggaaggctcggaatcaccagattagcttctaccgatgaggttaa 439 ||| |||||| ||||| ||||| || |||||||||| ||||||||||||||||||||| Sbjct: 394 agaatgtgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggttaa 453 Query: 440 agccgcctacgagaaaaagtgtgaagaactaaatagcagaggattggaagaaggggaaat 499 ||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| |||||| Sbjct: 454 agccgcctacgagaagaagtgcgaagaactgaatagcaaaggattggaagaagaggaaat 513 Query: 500 caataaggagcacgaccttctaaaggaatcttttaccatactatcgaccgaggaagagag 559 ||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 514 caacaaggagcatgacctcctaaaggaatcttttaccatactatggaccgaggaagagag 573 Query: 560 aagattatacgattggagcttggcaagaactggtcagcccgagcgatatgtatggccttt 619 |||||||||||||||||| |||||||||| ||| |||| ||||||||||| |||||||| Sbjct: 574 aagattatacgattggagtttggcaagaagtggaaagcctgagcgatatgtctggccttt 633 Query: 620 ccaagtcgatcccatggagctagctccagatcctccaaaggaaccagaagatgagttccc 679 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 634 cgaagtcgatcccatggagctagcaccagatcctccaaaggaaccagaagatgagttccc 693 Query: 680 aacgaagcttgtcggctactttttcttggcatggttcatactctctgttgccttatcggt 739 ||| ||||| || |||||||||||| |||||||||||||||| ||||||||||| || || Sbjct: 694 aacaaagctggttggctactttttcctggcatggttcatactatctgttgccttgtcagt 753 Query: 740 aactctcaacaaatgatgag 759 ||| ||||||| |||||||| Sbjct: 754 aaccctcaacagatgatgag 773 Score = 105 bits (53), Expect = 3e-19 Identities = 97/111 (87%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 2 tttttttttcatccccacttcccttatctcccgcgctcctctccctccactcccc---at 58 |||| ||| ||||||||| |||||||||||||||||||| | | ||||||||||| || Sbjct: 4 ttttatttccatccccacctcccttatctcccgcgctccacactctccactccccgccat 63 Query: 59 ggctgccgttggcgtcacctccccgccagcgccggccaccgtggccgccgc 109 |||||||||||||||| ||||||||| |||||| || ||||||||||||| Sbjct: 64 ggctgccgttggcgtcgtctccccgccggcgccgcccgccgtggccgccgc 114 >ref|NM_001073344.1| Oryza sativa (japonica cultivar-group) Os12g0498500 (Os12g0498500) mRNA, complete cds Length = 840 Score = 274 bits (138), Expect = 6e-70 Identities = 234/266 (87%) Strand = Plus / Plus Query: 260 ggagggggaccccgaagcgagcaccgacgtcgcaggaggcgccgccacctccacgcggcc 319 ||||||||||||||| || | || |||||||| || |||||||| || || |||||||| Sbjct: 213 ggagggggaccccgaggccgggacggacgtcgccggcggcgccgcgacgtcgacgcggcc 272 Query: 320 gccctactcgctcatctccgaggccaacgtgcagaaggcgttgcgcggcctcgcaattac 379 ||| |||||||||||||||| | |||||||||||||||| |||||||||||||||| || Sbjct: 273 gccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcctcgcaatcac 332 Query: 380 agatgctgatcactatggaaggctcggaatcaccagattagcttctaccgatgaggttaa 439 ||| |||||| ||||| ||||| || |||||||||| ||||||||||||||||||||| Sbjct: 333 agaatgtgatcattatgggaggcttgggatcaccagatcagcttctaccgatgaggttaa 392 Query: 440 agccgcctacgagaaaaagtgtgaagaactaaatagcagaggattggaagaaggggaaat 499 ||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| |||||| Sbjct: 393 agccgcctacgagaagaagtgcgaagaactgaatagcaaaggattggaagaagaggaaat 452 Query: 500 caataaggagcacgaccttctaaagg 525 ||| |||||||| ||||| ||||||| Sbjct: 453 caacaaggagcatgacctcctaaagg 478 Score = 250 bits (126), Expect = 8e-63 Identities = 156/166 (93%) Strand = Plus / Plus Query: 523 aggaatcttttaccatactatcgaccgaggaagagagaagattatacgattggagcttgg 582 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 569 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 628 Query: 583 caagaactggtcagcccgagcgatatgtatggcctttccaagtcgatcccatggagctag 642 |||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 629 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 688 Query: 643 ctccagatcctccaaaggaaccagaagatgagttcccaacgaagct 688 | |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 689 caccagatcctccaaaggaaccagaagatgagttcccaacaaagct 734 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 202 bits (102), Expect = 2e-48 Identities = 129/138 (93%) Strand = Plus / Minus Query: 523 aggaatcttttaccatactatcgaccgaggaagagagaagattatacgattggagcttgg 582 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 18959729 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 18959670 Query: 583 caagaactggtcagcccgagcgatatgtatggcctttccaagtcgatcccatggagctag 642 |||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 18959669 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 18959610 Query: 643 ctccagatcctccaaagg 660 | |||||||||||||||| Sbjct: 18959609 caccagatcctccaaagg 18959592 Score = 131 bits (66), Expect = 5e-27 Identities = 93/102 (91%) Strand = Plus / Minus Query: 658 aggaaccagaagatgagttcccaacgaagcttgtcggctactttttcttggcatggttca 717 ||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||| Sbjct: 18959398 aggaaccagaagatgagttcccaacaaagctggttggctactttttcctggcatggttca 18959339 Query: 718 tactctctgttgccttatcggtaactctcaacaaatgatgag 759 |||| ||||||||||| || ||||| ||||||| |||||||| Sbjct: 18959338 tactatctgttgccttgtcagtaaccctcaacagatgatgag 18959297 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 433 aggttaaagccgcctacgagaaaaagtgtgaagaactaaatagcagaggattggaagaag 492 |||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| Sbjct: 18959912 aggttaaagccgcctacgagaagaagtgcgaagaactgaatagcaaaggattggaagaag 18959853 Query: 493 gggaaatcaataaggagcacgaccttctaaagg 525 ||||||||| |||||||| ||||| ||||||| Sbjct: 18959852 aggaaatcaacaaggagcatgacctcctaaagg 18959820 Score = 105 bits (53), Expect = 3e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 260 ggagggggaccccgaagcgagcaccgacgtcgcaggaggcgccgccacctccacgcggcc 319 ||||||||||||||| || | || |||||||| || |||||||| || || |||||||| Sbjct: 18961298 ggagggggaccccgaggccgggacggacgtcgccggcggcgccgcgacgtcgacgcggcc 18961239 Query: 320 gccctactcgctcatctccgaggccaacgtgcagaaggcgttgcgcggcctcg 372 ||| |||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 18961238 gccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcctcg 18961186 Score = 105 bits (53), Expect = 3e-19 Identities = 97/111 (87%), Gaps = 3/111 (2%) Strand = Plus / Minus Query: 2 tttttttttcatccccacttcccttatctcccgcgctcctctccctccactcccc---at 58 |||| ||| ||||||||| |||||||||||||||||||| | | ||||||||||| || Sbjct: 18961568 ttttatttccatccccacctcccttatctcccgcgctccacactctccactccccgccat 18961509 Query: 59 ggctgccgttggcgtcacctccccgccagcgccggccaccgtggccgccgc 109 |||||||||||||||| ||||||||| |||||| || ||||||||||||| Sbjct: 18961508 ggctgccgttggcgtcgtctccccgccggcgccgcccgccgtggccgccgc 18961458 >emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 202 bits (102), Expect = 2e-48 Identities = 129/138 (93%) Strand = Plus / Plus Query: 523 aggaatcttttaccatactatcgaccgaggaagagagaagattatacgattggagcttgg 582 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 10650 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 10709 Query: 583 caagaactggtcagcccgagcgatatgtatggcctttccaagtcgatcccatggagctag 642 |||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 10710 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 10769 Query: 643 ctccagatcctccaaagg 660 | |||||||||||||||| Sbjct: 10770 caccagatcctccaaagg 10787 Score = 131 bits (66), Expect = 5e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 658 aggaaccagaagatgagttcccaacgaagcttgtcggctactttttcttggcatggttca 717 ||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||| Sbjct: 10981 aggaaccagaagatgagttcccaacaaagctggttggctactttttcctggcatggttca 11040 Query: 718 tactctctgttgccttatcggtaactctcaacaaatgatgag 759 |||| ||||||||||| || ||||| ||||||| |||||||| Sbjct: 11041 tactatctgttgccttgtcagtaaccctcaacagatgatgag 11082 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 433 aggttaaagccgcctacgagaaaaagtgtgaagaactaaatagcagaggattggaagaag 492 |||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| Sbjct: 10467 aggttaaagccgcctacgagaagaagtgcgaagaactgaatagcaaaggattggaagaag 10526 Query: 493 gggaaatcaataaggagcacgaccttctaaagg 525 ||||||||| |||||||| ||||| ||||||| Sbjct: 10527 aggaaatcaacaaggagcatgacctcctaaagg 10559 Score = 105 bits (53), Expect = 3e-19 Identities = 97/111 (87%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 2 tttttttttcatccccacttcccttatctcccgcgctcctctccctccactcccc---at 58 |||| ||| ||||||||| |||||||||||||||||||| | | ||||||||||| || Sbjct: 8811 ttttatttccatccccacctcccttatctcccgcgctccacactctccactccccgccat 8870 Query: 59 ggctgccgttggcgtcacctccccgccagcgccggccaccgtggccgccgc 109 |||||||||||||||| ||||||||| |||||| || ||||||||||||| Sbjct: 8871 ggctgccgttggcgtcgtctccccgccggcgccgcccgccgtggccgccgc 8921 Score = 105 bits (53), Expect = 3e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 260 ggagggggaccccgaagcgagcaccgacgtcgcaggaggcgccgccacctccacgcggcc 319 ||||||||||||||| || | || |||||||| || |||||||| || || |||||||| Sbjct: 9081 ggagggggaccccgaggccgggacggacgtcgccggcggcgccgcgacgtcgacgcggcc 9140 Query: 320 gccctactcgctcatctccgaggccaacgtgcagaaggcgttgcgcggcctcg 372 ||| |||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 9141 gccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcctcg 9193 >emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 202 bits (102), Expect = 2e-48 Identities = 129/138 (93%) Strand = Plus / Minus Query: 523 aggaatcttttaccatactatcgaccgaggaagagagaagattatacgattggagcttgg 582 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 55846 aggaatcttttaccatactatggaccgaggaagagagaagattatacgattggagtttgg 55787 Query: 583 caagaactggtcagcccgagcgatatgtatggcctttccaagtcgatcccatggagctag 642 |||||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 55786 caagaagtggaaagcctgagcgatatgtctggcctttcgaagtcgatcccatggagctag 55727 Query: 643 ctccagatcctccaaagg 660 | |||||||||||||||| Sbjct: 55726 caccagatcctccaaagg 55709 Score = 131 bits (66), Expect = 5e-27 Identities = 93/102 (91%) Strand = Plus / Minus Query: 658 aggaaccagaagatgagttcccaacgaagcttgtcggctactttttcttggcatggttca 717 ||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||| Sbjct: 55515 aggaaccagaagatgagttcccaacaaagctggttggctactttttcctggcatggttca 55456 Query: 718 tactctctgttgccttatcggtaactctcaacaaatgatgag 759 |||| ||||||||||| || ||||| ||||||| |||||||| Sbjct: 55455 tactatctgttgccttgtcagtaaccctcaacagatgatgag 55414 Score = 121 bits (61), Expect = 5e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 433 aggttaaagccgcctacgagaaaaagtgtgaagaactaaatagcagaggattggaagaag 492 |||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| Sbjct: 56029 aggttaaagccgcctacgagaagaagtgcgaagaactgaatagcaaaggattggaagaag 55970 Query: 493 gggaaatcaataaggagcacgaccttctaaagg 525 ||||||||| |||||||| ||||| ||||||| Sbjct: 55969 aggaaatcaacaaggagcatgacctcctaaagg 55937 Score = 105 bits (53), Expect = 3e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 260 ggagggggaccccgaagcgagcaccgacgtcgcaggaggcgccgccacctccacgcggcc 319 ||||||||||||||| || | || |||||||| || |||||||| || || |||||||| Sbjct: 57415 ggagggggaccccgaggccgggacggacgtcgccggcggcgccgcgacgtcgacgcggcc 57356 Query: 320 gccctactcgctcatctccgaggccaacgtgcagaaggcgttgcgcggcctcg 372 ||| |||||||||||||||| | |||||||||||||||| |||||||||||| Sbjct: 57355 gccgtactcgctcatctccgccgacaacgtgcagaaggcgatgcgcggcctcg 57303 Score = 105 bits (53), Expect = 3e-19 Identities = 97/111 (87%), Gaps = 3/111 (2%) Strand = Plus / Minus Query: 2 tttttttttcatccccacttcccttatctcccgcgctcctctccctccactcccc---at 58 |||| ||| ||||||||| |||||||||||||||||||| | | ||||||||||| || Sbjct: 57685 ttttatttccatccccacctcccttatctcccgcgctccacactctccactccccgccat 57626 Query: 59 ggctgccgttggcgtcacctccccgccagcgccggccaccgtggccgccgc 109 |||||||||||||||| ||||||||| |||||| || ||||||||||||| Sbjct: 57625 ggctgccgttggcgtcgtctccccgccggcgccgcccgccgtggccgccgc 57575