BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf040d18 (1130 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051554.1| Oryza sativa (japonica cultivar-group) Os01g... 176 1e-40 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 176 1e-40 >ref|NM_001051554.1| Oryza sativa (japonica cultivar-group) Os01g0884700 (Os01g0884700) mRNA, complete cds Length = 639 Score = 176 bits (89), Expect = 1e-40 Identities = 161/185 (87%) Strand = Plus / Plus Query: 502 ggggcggtgcgatggtggaagatgccgatggaggtgctgcggctgtgggcgctgcgcgcg 561 |||| |||||| |||||| | ||||||||| ||||| ||| |||||||||||| ||| Sbjct: 436 ggggtggtgcggtggtggcacctgccgatgggcgtgctccgggcgtgggcgctgcgggcg 495 Query: 562 gcccggagcgcgtggtcggtgcccgtcgccgtcgcgctgctcggaatcgccgtgctcggc 621 || |||||| ||||||| ||||||||||||||||||||||||| ||||||||||| || Sbjct: 496 gcgaggagcgtgtggtcgttgcccgtcgccgtcgcgctgctcggcatcgccgtgctgggg 555 Query: 622 cggcggctgtaccggatgcggcggcagagcaaggccctggcgcgcgtcaggctcgtcctt 681 ||||| |||||||| ||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 556 cggcgcctgtaccgcatgcggcggcagagcaaggccgtggcgcgcgtccgcctcgtcctc 615 Query: 682 gacga 686 ||||| Sbjct: 616 gacga 620 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Plus Query: 331 tccggcagcacgaactgggtggagccggaccctgatgacctcgtcttccctgcccgtgac 390 ||||||| | ||| |||||||||||| ||||| || |||||||||||||| | || |||| Sbjct: 232 tccggcaacgcgagctgggtggagcccgaccccgacgacctcgtcttccccggccctgac 291 Query: 391 cgcgctgcgctgtggtcggactcgtcgtcggacggggagaggcgcgaggaggctgaggc 449 ||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 292 cgcgcggcgctgtggtcggactcgtcggacgacggggagaggcgggaggaggccgaggc 350 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 176 bits (89), Expect = 1e-40 Identities = 161/185 (87%) Strand = Plus / Minus Query: 502 ggggcggtgcgatggtggaagatgccgatggaggtgctgcggctgtgggcgctgcgcgcg 561 |||| |||||| |||||| | ||||||||| ||||| ||| |||||||||||| ||| Sbjct: 38426316 ggggtggtgcggtggtggcacctgccgatgggcgtgctccgggcgtgggcgctgcgggcg 38426257 Query: 562 gcccggagcgcgtggtcggtgcccgtcgccgtcgcgctgctcggaatcgccgtgctcggc 621 || |||||| ||||||| ||||||||||||||||||||||||| ||||||||||| || Sbjct: 38426256 gcgaggagcgtgtggtcgttgcccgtcgccgtcgcgctgctcggcatcgccgtgctgggg 38426197 Query: 622 cggcggctgtaccggatgcggcggcagagcaaggccctggcgcgcgtcaggctcgtcctt 681 ||||| |||||||| ||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 38426196 cggcgcctgtaccgcatgcggcggcagagcaaggccgtggcgcgcgtccgcctcgtcctc 38426137 Query: 682 gacga 686 ||||| Sbjct: 38426136 gacga 38426132 Score = 133 bits (67), Expect = 2e-27 Identities = 118/135 (87%) Strand = Plus / Minus Query: 689 agaaggcatcccaattcaaggcccaagcatcacgtctgaatgaatccatcccgatggtgc 748 ||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||| | Sbjct: 38425034 agaaggcatcccagttcaaggcccaagcatcacgcctgaatgaatctttcccaatggcac 38424975 Query: 749 ggcaatctccaatcataaagcctttgcttcctgccaatggagtgaccccatggcctgtac 808 | | | |||| ||||| |||||| |||||||||| ||||||||||||||||||||||| | Sbjct: 38424974 gccgagctccgatcatgaagcctctgcttcctgcgaatggagtgaccccatggcctgtgc 38424915 Query: 809 tggggcacatgtgag 823 |||| ||||| |||| Sbjct: 38424914 tgggacacatctgag 38424900 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 331 tccggcagcacgaactgggtggagccggaccctgatgacctcgtcttccctgcccgtgac 390 ||||||| | ||| |||||||||||| ||||| || |||||||||||||| | || |||| Sbjct: 38426520 tccggcaacgcgagctgggtggagcccgaccccgacgacctcgtcttccccggccctgac 38426461 Query: 391 cgcgctgcgctgtggtcggactcgtcgtcggacggggagaggcgcgaggaggctgaggc 449 ||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 38426460 cgcgcggcgctgtggtcggactcgtcggacgacggggagaggcgggaggaggccgaggc 38426402 >dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 176 bits (89), Expect = 1e-40 Identities = 161/185 (87%) Strand = Plus / Minus Query: 502 ggggcggtgcgatggtggaagatgccgatggaggtgctgcggctgtgggcgctgcgcgcg 561 |||| |||||| |||||| | ||||||||| ||||| ||| |||||||||||| ||| Sbjct: 11731 ggggtggtgcggtggtggcacctgccgatgggcgtgctccgggcgtgggcgctgcgggcg 11672 Query: 562 gcccggagcgcgtggtcggtgcccgtcgccgtcgcgctgctcggaatcgccgtgctcggc 621 || |||||| ||||||| ||||||||||||||||||||||||| ||||||||||| || Sbjct: 11671 gcgaggagcgtgtggtcgttgcccgtcgccgtcgcgctgctcggcatcgccgtgctgggg 11612 Query: 622 cggcggctgtaccggatgcggcggcagagcaaggccctggcgcgcgtcaggctcgtcctt 681 ||||| |||||||| ||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 11611 cggcgcctgtaccgcatgcggcggcagagcaaggccgtggcgcgcgtccgcctcgtcctc 11552 Query: 682 gacga 686 ||||| Sbjct: 11551 gacga 11547 Score = 133 bits (67), Expect = 2e-27 Identities = 118/135 (87%) Strand = Plus / Minus Query: 689 agaaggcatcccaattcaaggcccaagcatcacgtctgaatgaatccatcccgatggtgc 748 ||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||| | Sbjct: 10449 agaaggcatcccagttcaaggcccaagcatcacgcctgaatgaatctttcccaatggcac 10390 Query: 749 ggcaatctccaatcataaagcctttgcttcctgccaatggagtgaccccatggcctgtac 808 | | | |||| ||||| |||||| |||||||||| ||||||||||||||||||||||| | Sbjct: 10389 gccgagctccgatcatgaagcctctgcttcctgcgaatggagtgaccccatggcctgtgc 10330 Query: 809 tggggcacatgtgag 823 |||| ||||| |||| Sbjct: 10329 tgggacacatctgag 10315 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 331 tccggcagcacgaactgggtggagccggaccctgatgacctcgtcttccctgcccgtgac 390 ||||||| | ||| |||||||||||| ||||| || |||||||||||||| | || |||| Sbjct: 11935 tccggcaacgcgagctgggtggagcccgaccccgacgacctcgtcttccccggccctgac 11876 Query: 391 cgcgctgcgctgtggtcggactcgtcgtcggacggggagaggcgcgaggaggctgaggc 449 ||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 11875 cgcgcggcgctgtggtcggactcgtcggacgacggggagaggcgggaggaggccgaggc 11817 >gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 176 bits (89), Expect = 1e-40 Identities = 161/185 (87%) Strand = Plus / Minus Query: 502 ggggcggtgcgatggtggaagatgccgatggaggtgctgcggctgtgggcgctgcgcgcg 561 |||| |||||| |||||| | ||||||||| ||||| ||| |||||||||||| ||| Sbjct: 19420 ggggtggtgcggtggtggcacctgccgatgggcgtgctccgggcgtgggcgctgcgggcg 19361 Query: 562 gcccggagcgcgtggtcggtgcccgtcgccgtcgcgctgctcggaatcgccgtgctcggc 621 || |||||| ||||||| ||||||||||||||||||||||||| ||||||||||| || Sbjct: 19360 gcgaggagcgtgtggtcgttgcccgtcgccgtcgcgctgctcggcatcgccgtgctgggg 19301 Query: 622 cggcggctgtaccggatgcggcggcagagcaaggccctggcgcgcgtcaggctcgtcctt 681 ||||| |||||||| ||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 19300 cggcgcctgtaccgcatgcggcggcagagcaaggccgtggcgcgcgtccgcctcgtcctc 19241 Query: 682 gacga 686 ||||| Sbjct: 19240 gacga 19236 Score = 133 bits (67), Expect = 2e-27 Identities = 118/135 (87%) Strand = Plus / Minus Query: 689 agaaggcatcccaattcaaggcccaagcatcacgtctgaatgaatccatcccgatggtgc 748 ||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||| | Sbjct: 18138 agaaggcatcccagttcaaggcccaagcatcacgcctgaatgaatctttcccaatggcac 18079 Query: 749 ggcaatctccaatcataaagcctttgcttcctgccaatggagtgaccccatggcctgtac 808 | | | |||| ||||| |||||| |||||||||| ||||||||||||||||||||||| | Sbjct: 18078 gccgagctccgatcatgaagcctctgcttcctgcgaatggagtgaccccatggcctgtgc 18019 Query: 809 tggggcacatgtgag 823 |||| ||||| |||| Sbjct: 18018 tgggacacatctgag 18004 Score = 101 bits (51), Expect = 6e-18 Identities = 103/119 (86%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 331 tccggcagcacgaactgggtggagccggaccctgatgacctcgtcttccctgcccgtgac 390 ||||||| | ||| |||||||||||| ||||| || |||||||||||||| | || |||| Sbjct: 19620 tccggcaacgcgagctgggtggagcccgaccccgacgacctcgtcttccccggccctgac 19561 Query: 391 cgcgctgcgctgtggtcggactcgtcgtcggacggggagaggcgcgaggaggctgaggc 449 ||||| ||||||||||||||||||||| |||||||||| ||| |||||||| ||||| Sbjct: 19560 cgcgcggcgctgtggtcggactcgtcggacgacggggaga-gcgggaggaggccgaggc 19503