BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf039d12 (1714 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|BT019259.1| Zea mays clone Contig932.F mRNA sequence 208 5e-50 ref|NM_001060409.1| Oryza sativa (japonica cultivar-group) Os04g... 202 3e-48 dbj|AK106295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 8e-46 gb|AY112128.1| Zea mays CL30918_1 mRNA sequence 163 3e-36 emb|CT827952.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 111 1e-20 >gb|BT019259.1| Zea mays clone Contig932.F mRNA sequence Length = 1502 Score = 208 bits (105), Expect = 5e-50 Identities = 184/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 1294 cgtatagatggaaaggaattcttccgacaggcacggacgcgtctttcttatgagcaattt 1353 ||||||||||| ||||||||||||||||| |||||| | | |||||||||||||||||| Sbjct: 593 cgtatagatgggaaggaattcttccgacaagcacgggcaagactttcttatgagcaattt 534 Query: 1354 ggagcattttt-ggcgaatatcaaggaatttaatgctcagaaacagtcgggagaggacac 1412 ||||| ||||| ||| || |||||||| || |||||||| ||||| || | |||||||| Sbjct: 533 ggagcgttttttggccaacatcaaggagttcaatgctcaaaaacaatcacgggaggacac 474 Query: 1413 aatgtcaaaagcagaagagatttttggtacagagcacaaagatttatacatttctttcca 1472 ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 473 cctgtcaaaagcagaagagatttttggaacagaacacaaagacttgtacatttctttcca 414 Query: 1473 gaatatgcttaatcgcaaccaatcatgaa 1501 ||||||||||| ||||||||| ||||||| Sbjct: 413 gaatatgcttagtcgcaaccagtcatgaa 385 Score = 196 bits (99), Expect = 2e-46 Identities = 181/207 (87%), Gaps = 6/207 (2%) Strand = Plus / Minus Query: 627 cgtatagatgggaaggaattcttccgaca-----ggacgcgtctttcttatgagcaattt 681 ||||||||||||||||||||||||||||| || | | |||||||||||||||||| Sbjct: 593 cgtatagatgggaaggaattcttccgacaagcacgggcaagactttcttatgagcaattt 534 Query: 682 ggagcattttt-ggcgaatatcaaggaatttaatgctcagaaacagtcgggagaggacac 740 ||||| ||||| ||| || |||||||| || |||||||| ||||| || | |||||||| Sbjct: 533 ggagcgttttttggccaacatcaaggagttcaatgctcaaaaacaatcacgggaggacac 474 Query: 741 cctgtcaaaagcagaagagatttttggtacagagcacaaagatttatacatttctttcca 800 ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 473 cctgtcaaaagcagaagagatttttggaacagaacacaaagacttgtacatttctttcca 414 Query: 801 gaatatgcttaatcgcaaccaatcatg 827 ||||||||||| ||||||||| ||||| Sbjct: 413 gaatatgcttagtcgcaaccagtcatg 387 >ref|NM_001060409.1| Oryza sativa (japonica cultivar-group) Os04g0616000 (Os04g0616000) mRNA, complete cds Length = 1602 Score = 202 bits (102), Expect = 3e-48 Identities = 183/210 (87%) Strand = Plus / Plus Query: 1284 agggcgacctcgtatagatggaaaggaattcttccgacaggcacggacgcgtctttctta 1343 |||||| || |||||||| ||||||||||| ||||| || |||||||| || ||||| || Sbjct: 876 agggcggccccgtatagacggaaaggaatttttccggcaagcacggacacgactttcgta 935 Query: 1344 tgagcaatttggagcatttttggcgaatatcaaggaatttaatgctcagaaacagtcggg 1403 |||||||||||| |||||||| || || |||||||| || |||||||||||||| || | Sbjct: 936 tgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaacaatcacg 995 Query: 1404 agaggacacaatgtcaaaagcagaagagatttttggtacagagcacaaagatttatacat 1463 ||||||||| | ||||| ||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 996 agaggacactctctcaaaggcagaagagatttttggaacagaacataaagatttgtacat 1055 Query: 1464 ttctttccagaatatgcttaatcgcaacca 1493 ||||||||||||||||||||| |||||||| Sbjct: 1056 ttctttccagaatatgcttaaccgcaacca 1085 Score = 170 bits (86), Expect = 1e-38 Identities = 140/158 (88%) Strand = Plus / Plus Query: 664 ctttcttatgagcaatttggagcatttttggcgaatatcaaggaatttaatgctcagaaa 723 ||||| |||||||||||||| |||||||| || || |||||||| || |||||||||||| Sbjct: 928 ctttcgtatgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaa 987 Query: 724 cagtcgggagaggacaccctgtcaaaagcagaagagatttttggtacagagcacaaagat 783 || || |||||||||| || ||||| ||||||||||||||||| ||||| || |||||| Sbjct: 988 caatcacgagaggacactctctcaaaggcagaagagatttttggaacagaacataaagat 1047 Query: 784 ttatacatttctttccagaatatgcttaatcgcaacca 821 || |||||||||||||||||||||||||| |||||||| Sbjct: 1048 ttgtacatttctttccagaatatgcttaaccgcaacca 1085 >dbj|AK106295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B10, full insert sequence Length = 1601 Score = 194 bits (98), Expect = 8e-46 Identities = 182/210 (86%) Strand = Plus / Plus Query: 1284 agggcgacctcgtatagatggaaaggaattcttccgacaggcacggacgcgtctttctta 1343 |||||| || |||||||| ||||||||||| ||||| || |||||||| || ||||| || Sbjct: 875 agggcggccccgtatagacggaaaggaatttttccggcaagcacggacacgactttcgta 934 Query: 1344 tgagcaatttggagcatttttggcgaatatcaaggaatttaatgctcagaaacagtcggg 1403 |||||||||||| |||||||| || || |||||||| || |||||||||||||| || | Sbjct: 935 tgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaacaatcacg 994 Query: 1404 agaggacacaatgtcaaaagcagaagagatttttggtacagagcacaaagatttatacat 1463 ||||||||| | ||||| ||||||||||||||||| ||||| || |||| ||| ||||| Sbjct: 995 agaggacactctctcaaaggcagaagagatttttggaacagaacataaaggtttgtacat 1054 Query: 1464 ttctttccagaatatgcttaatcgcaacca 1493 ||||||||||||||||||||| |||||||| Sbjct: 1055 ttctttccagaatatgcttaaccgcaacca 1084 Score = 163 bits (82), Expect = 3e-36 Identities = 139/158 (87%) Strand = Plus / Plus Query: 664 ctttcttatgagcaatttggagcatttttggcgaatatcaaggaatttaatgctcagaaa 723 ||||| |||||||||||||| |||||||| || || |||||||| || |||||||||||| Sbjct: 927 ctttcgtatgagcaatttggggcatttttagctaacatcaaggagttcaatgctcagaaa 986 Query: 724 cagtcgggagaggacaccctgtcaaaagcagaagagatttttggtacagagcacaaagat 783 || || |||||||||| || ||||| ||||||||||||||||| ||||| || |||| | Sbjct: 987 caatcacgagaggacactctctcaaaggcagaagagatttttggaacagaacataaaggt 1046 Query: 784 ttatacatttctttccagaatatgcttaatcgcaacca 821 || |||||||||||||||||||||||||| |||||||| Sbjct: 1047 ttgtacatttctttccagaatatgcttaaccgcaacca 1084 Score = 81.8 bits (41), Expect = 9e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1031 ttttggtctgtgtaattaagcatacattcgcattcctttgtagcacttc 1079 ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 1321 ttttggtctgtgtaattaagcatacattcacattccattgtagcacttc 1369 >gb|AY112128.1| Zea mays CL30918_1 mRNA sequence Length = 662 Score = 163 bits (82), Expect = 3e-36 Identities = 174/208 (83%) Strand = Plus / Minus Query: 1294 cgtatagatggaaaggaattcttccgacaggcacggacgcgtctttcttatgagcaattt 1353 ||||||||||| ||||||||||||||||| |||||||| | ||||| |||||||||||| Sbjct: 605 cgtatagatgggaaggaattcttccgacaagcacggacaagactttcgtatgagcaattt 546 Query: 1354 ggagcatttttggcgaatatcaaggaatttaatgctcagaaacagtcgggagaggacaca 1413 |||||| ||| ||||||||||| || |||||||||||||| || | |||||||| Sbjct: 545 ggagcannnnnggccaatatcaaggagttcaatgctcagaaacaatcacgggaggacacc 486 Query: 1414 atgtcaaaagcagaagagatttttggtacagagcacaaagatttatacatttctttccag 1473 |||||||||||||||||| || ||||| ||||| ||| | ||||||||||||||| Sbjct: 485 ctgtcaaaagcagaagagannnnnggaacagaacacaatgatctgtacatttctttccag 426 Query: 1474 aatatgcttaatcgcaaccaatcatgaa 1501 |||||||||| || ||| ||||||||| Sbjct: 425 aatatgcttagccgaaactaatcatgaa 398 Score = 151 bits (76), Expect = 1e-32 Identities = 159/190 (83%), Gaps = 5/190 (2%) Strand = Plus / Minus Query: 627 cgtatagatgggaaggaattcttccgaca-----ggacgcgtctttcttatgagcaattt 681 ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||| Sbjct: 605 cgtatagatgggaaggaattcttccgacaagcacggacaagactttcgtatgagcaattt 546 Query: 682 ggagcatttttggcgaatatcaaggaatttaatgctcagaaacagtcgggagaggacacc 741 |||||| ||| ||||||||||| || |||||||||||||| || | ||||||||| Sbjct: 545 ggagcannnnnggccaatatcaaggagttcaatgctcagaaacaatcacgggaggacacc 486 Query: 742 ctgtcaaaagcagaagagatttttggtacagagcacaaagatttatacatttctttccag 801 ||||||||||||||||||| || ||||| ||||| ||| | ||||||||||||||| Sbjct: 485 ctgtcaaaagcagaagagannnnnggaacagaacacaatgatctgtacatttctttccag 426 Query: 802 aatatgctta 811 |||||||||| Sbjct: 425 aatatgctta 416 >emb|CT827952.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525G02, complete sequence Length = 112944 Score = 111 bits (56), Expect = 1e-20 Identities = 80/88 (90%) Strand = Plus / Minus Query: 734 aggacaccctgtcaaaagcagaagagatttttggtacagagcacaaagatttatacattt 793 ||||||| || ||||| ||||||||||||||||| ||||| || |||||||| ||||||| Sbjct: 39354 aggacactctctcaaaggcagaagagatttttggaacagaacataaagatttgtacattt 39295 Query: 794 ctttccagaatatgcttaatcgcaacca 821 ||||||||||||||||||| |||||||| Sbjct: 39294 ctttccagaatatgcttaaccgcaacca 39267 Score = 105 bits (53), Expect = 6e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 1417 tcaaaagcagaagagatttttggtacagagcacaaagatttatacatttctttccagaat 1476 ||||| ||||||||||||||||| ||||| || |||||||| |||||||||||||||||| Sbjct: 39343 tcaaaggcagaagagatttttggaacagaacataaagatttgtacatttctttccagaat 39284 Query: 1477 atgcttaatcgcaacca 1493 |||||||| |||||||| Sbjct: 39283 atgcttaaccgcaacca 39267