BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf038n15 (1194 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051145.1| Oryza sativa (japonica cultivar-group) Os01g... 357 7e-95 dbj|AK068533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 7e-95 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 256 2e-64 dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 256 2e-64 >ref|NM_001051145.1| Oryza sativa (japonica cultivar-group) Os01g0814700 (Os01g0814700) mRNA, complete cds Length = 1235 Score = 357 bits (180), Expect = 7e-95 Identities = 300/340 (88%) Strand = Plus / Plus Query: 310 cagcagcagctccaccccaaacccgtctacaacaccaagttcgagaggcacaaggtgcgg 369 ||||||||||||||||||||| |||||||||| || |||||||||||||| ||||||||| Sbjct: 332 cagcagcagctccaccccaaatccgtctacaaaactaagttcgagaggcataaggtgcgg 391 Query: 370 atggcggaggcgaggcgacgggcggtgttcgaggctgaggggcaggggctggcgtgccag 429 ||||||||||||||||| |||| |||||||||||| ||||| | | | ||||||||| | Sbjct: 392 atggcggaggcgaggcggcgggtggtgttcgaggcagagggccgcgtgttggcgtgccgg 451 Query: 430 aggcggctggcggagctggaggagtcgatgcgggcggagggggagaggatgaaggccgcc 489 ||||||||| || ||||||| |||||| ||| || ||| ||||||| ||||||| ||||| Sbjct: 452 aggcggctgacgcagctggaagagtcgttgcaggaggaaggggagaagatgaagaccgcc 511 Query: 490 gcgcaggagctggacaacctcgagagggttaggagagcttatgtggcattaaacctatgg 549 ||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 512 gcgcaggagctggacaacctcgagagggtcaggagagcttcagtggcattaaatgtatgg 571 Query: 550 caaccacaagttgttcgttggagtcagaaacagttggttcagcaatgcatagttcctgtc 609 |||||||||||||||||| | |||| ||||| |||||||| || |||| |||||| || Sbjct: 572 caaccacaagttgttcgtggacgtcaaaaacaattggttcaacagtgcacagttccagtt 631 Query: 610 gattctcgtcttagcgttgtaaacatggagctgaaagttt 649 ||||| |||||||| | ||||||||||||||||||||||| Sbjct: 632 gattcccgtcttagtgatgtaaacatggagctgaaagttt 671 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 149 cggcgtcctccgcgctggggttccgcgacctctgctgcctcgccatcgcctcccgccgcc 208 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 171 cggcctcctccgcgctggggttccgcgacctctgcgccctcgccatcgcctcccgccgcc 230 Query: 209 tccgccgcctctccctc 225 ||||||||||||||||| Sbjct: 231 tccgccgcctctccctc 247 Score = 79.8 bits (40), Expect = 2e-11 Identities = 78/90 (86%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 793 tgagtatgaggaagcattgagacgagcaaaatatcatccactgcagagt---catacaag 849 |||||||||||||||||||| |||||| |||||||||| |||||||| |||||||| Sbjct: 695 tgagtatgaggaagcattgaagagagcaatatatcatccattgcagagtagccatacaag 754 Query: 850 cccaattgtcaatgaaccacaagcaaagag 879 |||||| |||||| |||||||||||||| Sbjct: 755 ttcaattgccaatgagccacaagcaaagag 784 >dbj|AK068533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I12, full insert sequence Length = 1236 Score = 357 bits (180), Expect = 7e-95 Identities = 300/340 (88%) Strand = Plus / Plus Query: 310 cagcagcagctccaccccaaacccgtctacaacaccaagttcgagaggcacaaggtgcgg 369 ||||||||||||||||||||| |||||||||| || |||||||||||||| ||||||||| Sbjct: 333 cagcagcagctccaccccaaatccgtctacaaaactaagttcgagaggcataaggtgcgg 392 Query: 370 atggcggaggcgaggcgacgggcggtgttcgaggctgaggggcaggggctggcgtgccag 429 ||||||||||||||||| |||| |||||||||||| ||||| | | | ||||||||| | Sbjct: 393 atggcggaggcgaggcggcgggtggtgttcgaggcagagggccgcgtgttggcgtgccgg 452 Query: 430 aggcggctggcggagctggaggagtcgatgcgggcggagggggagaggatgaaggccgcc 489 ||||||||| || ||||||| |||||| ||| || ||| ||||||| ||||||| ||||| Sbjct: 453 aggcggctgacgcagctggaagagtcgttgcaggaggaaggggagaagatgaagaccgcc 512 Query: 490 gcgcaggagctggacaacctcgagagggttaggagagcttatgtggcattaaacctatgg 549 ||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 513 gcgcaggagctggacaacctcgagagggtcaggagagcttcagtggcattaaatgtatgg 572 Query: 550 caaccacaagttgttcgttggagtcagaaacagttggttcagcaatgcatagttcctgtc 609 |||||||||||||||||| | |||| ||||| |||||||| || |||| |||||| || Sbjct: 573 caaccacaagttgttcgtggacgtcaaaaacaattggttcaacagtgcacagttccagtt 632 Query: 610 gattctcgtcttagcgttgtaaacatggagctgaaagttt 649 ||||| |||||||| | ||||||||||||||||||||||| Sbjct: 633 gattcccgtcttagtgatgtaaacatggagctgaaagttt 672 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 149 cggcgtcctccgcgctggggttccgcgacctctgctgcctcgccatcgcctcccgccgcc 208 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 172 cggcctcctccgcgctggggttccgcgacctctgcgccctcgccatcgcctcccgccgcc 231 Query: 209 tccgccgcctctccctc 225 ||||||||||||||||| Sbjct: 232 tccgccgcctctccctc 248 Score = 79.8 bits (40), Expect = 2e-11 Identities = 78/90 (86%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 793 tgagtatgaggaagcattgagacgagcaaaatatcatccactgcagagt---catacaag 849 |||||||||||||||||||| |||||| |||||||||| |||||||| |||||||| Sbjct: 696 tgagtatgaggaagcattgaagagagcaatatatcatccattgcagagtagccatacaag 755 Query: 850 cccaattgtcaatgaaccacaagcaaagag 879 |||||| |||||| |||||||||||||| Sbjct: 756 ttcaattgccaatgagccacaagcaaagag 785 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 256 bits (129), Expect = 2e-64 Identities = 307/363 (84%), Gaps = 5/363 (1%) Strand = Plus / Minus Query: 520 aggagagcttatgtggcattaaacctatggcaaccacaagttgttcgttggagtcagaaa 579 |||||||||| ||||||||||| ||||||||||||||||||||||| | |||| ||| Sbjct: 34637716 aggagagcttcagtggcattaaatgtatggcaaccacaagttgttcgtggacgtcaaaaa 34637657 Query: 580 cagttggttcagcaatgcatagttcctgtcgattctcgtcttagcgttgtaaacatggag 639 || |||||||| || |||| |||||| || ||||| |||||||| | ||||||||||||| Sbjct: 34637656 caattggttcaacagtgcacagttccagttgattcccgtcttagtgatgtaaacatggag 34637597 Query: 640 ctgaaagtttgtaagcaacaaattgcaacttataaaaacacttatgtatgtgatcttggg 699 ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 34637596 ctgaaagtttgtaagcaacaaatagcaacttataagaacatttatgtatgtgatcttgga 34637537 Query: 700 tttaactaaaattgagagagatcgacaaggctagccttactatagttgtgcttttgttgc 759 || ||| ||||| | ||| ||||| |||||||||||| | ||||| ||||||||| Sbjct: 34637536 cttgactgcaattg-taatgattgacaatgctagccttactggaattgtgtttttgttgc 34637478 Query: 760 ttttgtcagaacaaggaggagctgaagttgaattgagtatgaggaagcattgagacgagc 819 | || ||||||||||||| || || |||| |||||||||||||||||||| |||| Sbjct: 34637477 tattatcagaacaaggagaaggaaaaactgaa-tgagtatgaggaagcattgaagagagc 34637419 Query: 820 aaaatatcatccactgcagagt---catacaagcccaattgtcaatgaaccacaagcaaa 876 || |||||||||| |||||||| |||||||| |||||| |||||| ||||||||||| Sbjct: 34637418 aatatatcatccattgcagagtagccatacaagttcaattgccaatgagccacaagcaaa 34637359 Query: 877 gag 879 ||| Sbjct: 34637358 gag 34637356 Score = 188 bits (95), Expect = 4e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 348 gttcgagaggcacaaggtgcggatggcggaggcgaggcgacgggcggtgttcgaggctga 407 |||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| || Sbjct: 34639083 gttcgagaggcataaggtgcggatggcggaggcgaggcggcgggtggtgttcgaggcaga 34639024 Query: 408 ggggcaggggctggcgtgccagaggcggctggcggagctggaggagtcgatgcgggcgga 467 ||| | | | ||||||||| |||||||||| || ||||||| |||||| ||| || ||| Sbjct: 34639023 gggccgcgtgttggcgtgccggaggcggctgacgcagctggaagagtcgttgcaggagga 34638964 Query: 468 gggggagaggatgaaggccgccgcgcaggagctggacaacctcgagagggt 518 ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 34638963 aggggagaagatgaagaccgccgcgcaggagctggacaacctcgagagggt 34638913 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 149 cggcgtcctccgcgctggggttccgcgacctctgctgcctcgccatcgcctcccgccgcc 208 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 34639359 cggcctcctccgcgctggggttccgcgacctctgcgccctcgccatcgcctcccgccgcc 34639300 Query: 209 tccgccgcctctccctc 225 ||||||||||||||||| Sbjct: 34639299 tccgccgcctctccctc 34639283 >dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 256 bits (129), Expect = 2e-64 Identities = 307/363 (84%), Gaps = 5/363 (1%) Strand = Plus / Minus Query: 520 aggagagcttatgtggcattaaacctatggcaaccacaagttgttcgttggagtcagaaa 579 |||||||||| ||||||||||| ||||||||||||||||||||||| | |||| ||| Sbjct: 89733 aggagagcttcagtggcattaaatgtatggcaaccacaagttgttcgtggacgtcaaaaa 89674 Query: 580 cagttggttcagcaatgcatagttcctgtcgattctcgtcttagcgttgtaaacatggag 639 || |||||||| || |||| |||||| || ||||| |||||||| | ||||||||||||| Sbjct: 89673 caattggttcaacagtgcacagttccagttgattcccgtcttagtgatgtaaacatggag 89614 Query: 640 ctgaaagtttgtaagcaacaaattgcaacttataaaaacacttatgtatgtgatcttggg 699 ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 89613 ctgaaagtttgtaagcaacaaatagcaacttataagaacatttatgtatgtgatcttgga 89554 Query: 700 tttaactaaaattgagagagatcgacaaggctagccttactatagttgtgcttttgttgc 759 || ||| ||||| | ||| ||||| |||||||||||| | ||||| ||||||||| Sbjct: 89553 cttgactgcaattg-taatgattgacaatgctagccttactggaattgtgtttttgttgc 89495 Query: 760 ttttgtcagaacaaggaggagctgaagttgaattgagtatgaggaagcattgagacgagc 819 | || ||||||||||||| || || |||| |||||||||||||||||||| |||| Sbjct: 89494 tattatcagaacaaggagaaggaaaaactgaa-tgagtatgaggaagcattgaagagagc 89436 Query: 820 aaaatatcatccactgcagagt---catacaagcccaattgtcaatgaaccacaagcaaa 876 || |||||||||| |||||||| |||||||| |||||| |||||| ||||||||||| Sbjct: 89435 aatatatcatccattgcagagtagccatacaagttcaattgccaatgagccacaagcaaa 89376 Query: 877 gag 879 ||| Sbjct: 89375 gag 89373 Score = 188 bits (95), Expect = 4e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 348 gttcgagaggcacaaggtgcggatggcggaggcgaggcgacgggcggtgttcgaggctga 407 |||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| || Sbjct: 91100 gttcgagaggcataaggtgcggatggcggaggcgaggcggcgggtggtgttcgaggcaga 91041 Query: 408 ggggcaggggctggcgtgccagaggcggctggcggagctggaggagtcgatgcgggcgga 467 ||| | | | ||||||||| |||||||||| || ||||||| |||||| ||| || ||| Sbjct: 91040 gggccgcgtgttggcgtgccggaggcggctgacgcagctggaagagtcgttgcaggagga 90981 Query: 468 gggggagaggatgaaggccgccgcgcaggagctggacaacctcgagagggt 518 ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 90980 aggggagaagatgaagaccgccgcgcaggagctggacaacctcgagagggt 90930 Score = 129 bits (65), Expect = 3e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 149 cggcgtcctccgcgctggggttccgcgacctctgctgcctcgccatcgcctcccgccgcc 208 |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 91376 cggcctcctccgcgctggggttccgcgacctctgcgccctcgccatcgcctcccgccgcc 91317 Query: 209 tccgccgcctctccctc 225 ||||||||||||||||| Sbjct: 91316 tccgccgcctctccctc 91300