BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf038h16 (934 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073021.1| Oryza sativa (japonica cultivar-group) Os12g... 313 7e-82 dbj|AK102026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 7e-82 emb|CT830971.1| Oryza sativa (indica cultivar-group) cDNA clone:... 303 7e-79 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 131 6e-27 emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005... 131 6e-27 >ref|NM_001073021.1| Oryza sativa (japonica cultivar-group) Os12g0244500 (Os12g0244500) mRNA, complete cds Length = 978 Score = 313 bits (158), Expect = 7e-82 Identities = 399/478 (83%), Gaps = 6/478 (1%) Strand = Plus / Plus Query: 252 tcaggactgggtca---aggaagcatgagctgaagtctaagcaaaagctcgagaagaagc 308 |||||||||||||| | ||||||||| |||||||| || || ||||| |||||||||| Sbjct: 157 tcaggactgggtcacctaagaagcatgaactgaagtccaaacagaagcttgagaagaagc 216 Query: 309 tcagcttctacacaaaagtgaaagatgcagttacctccctaagtgctaaaaagactatca 368 ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 217 tcagcttctacacaaaagtgaaagatgcagtaacctccctaaatgctacaaagactatct 276 Query: 369 gtaagaaaacgaaacagaggagccgtcagaagaaattgaaagcatatgatctctcagcgc 428 | |||||| | |||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 277 gcaagaaatctaaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgc 336 Query: 429 tcactgagttccttccagaaacggctgcctcgaagcagcagacggaagcaaagctgaact 488 || ||||||||||||| ||||| | |||||| || | ||| || |||||||| ||||||| Sbjct: 337 tctctgagttccttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaact 396 Query: 489 gcaaatcgaagcaggatctagtgcaacgggaggctgctcaactgaacgctgtattgaaca 548 ||||||||||||| | | ||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 397 gcaaatcgaagcaagctttagtgcaacgggaggctgcccaactgaatgctgtgctgacca 456 Query: 549 atcctcagttccagatcgatccattcgctgcaattcaccagcacctcgtatccacgcagc 608 |||| ||||||||| |||| || || || || || || |||||||| | || || |||| Sbjct: 457 atccgcagttccagctcgacccgtttgcggcgatccatcagcacctgttgtcaacacagc 516 Query: 609 caccttcagccttgaaggacaatgactccgcgaagcacgggaagaaatctaaggacaaga 668 |||| || || ||||| | | ||||| ||||| |||||| | |||||||||||| Sbjct: 517 caccctctgcgagaaaggagagcaattccgccaagcaggggaaggaccctaaggacaaga 576 Query: 669 aaag---gaagaagaagaagaacgcttcgtcgacctctcaatcaatggatatctgata 723 |||| ||| ||||||||||| ||||| ||| |||| | |||||||||||||||| Sbjct: 577 aaagaaagaacaagaagaagaatgcttcatcggcctccgaggcaatggatatctgata 634 >dbj|AK102026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080M18, full insert sequence Length = 979 Score = 313 bits (158), Expect = 7e-82 Identities = 399/478 (83%), Gaps = 6/478 (1%) Strand = Plus / Plus Query: 252 tcaggactgggtca---aggaagcatgagctgaagtctaagcaaaagctcgagaagaagc 308 |||||||||||||| | ||||||||| |||||||| || || ||||| |||||||||| Sbjct: 158 tcaggactgggtcacctaagaagcatgaactgaagtccaaacagaagcttgagaagaagc 217 Query: 309 tcagcttctacacaaaagtgaaagatgcagttacctccctaagtgctaaaaagactatca 368 ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 218 tcagcttctacacaaaagtgaaagatgcagtaacctccctaaatgctacaaagactatct 277 Query: 369 gtaagaaaacgaaacagaggagccgtcagaagaaattgaaagcatatgatctctcagcgc 428 | |||||| | |||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 278 gcaagaaatctaaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgc 337 Query: 429 tcactgagttccttccagaaacggctgcctcgaagcagcagacggaagcaaagctgaact 488 || ||||||||||||| ||||| | |||||| || | ||| || |||||||| ||||||| Sbjct: 338 tctctgagttccttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaact 397 Query: 489 gcaaatcgaagcaggatctagtgcaacgggaggctgctcaactgaacgctgtattgaaca 548 ||||||||||||| | | ||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 398 gcaaatcgaagcaagctttagtgcaacgggaggctgcccaactgaatgctgtgctgacca 457 Query: 549 atcctcagttccagatcgatccattcgctgcaattcaccagcacctcgtatccacgcagc 608 |||| ||||||||| |||| || || || || || || |||||||| | || || |||| Sbjct: 458 atccgcagttccagctcgacccgtttgcggcgatccatcagcacctgttgtcaacacagc 517 Query: 609 caccttcagccttgaaggacaatgactccgcgaagcacgggaagaaatctaaggacaaga 668 |||| || || ||||| | | ||||| ||||| |||||| | |||||||||||| Sbjct: 518 caccctctgcgagaaaggagagcaattccgccaagcaggggaaggaccctaaggacaaga 577 Query: 669 aaag---gaagaagaagaagaacgcttcgtcgacctctcaatcaatggatatctgata 723 |||| ||| ||||||||||| ||||| ||| |||| | |||||||||||||||| Sbjct: 578 aaagaaagaacaagaagaagaatgcttcatcggcctccgaggcaatggatatctgata 635 >emb|CT830971.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN019A12, full insert sequence Length = 987 Score = 303 bits (153), Expect = 7e-79 Identities = 278/319 (87%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 252 tcaggactgggtca---aggaagcatgagctgaagtctaagcaaaagctcgagaagaagc 308 |||||||||||||| | ||||||||| |||||||| || || ||||| |||||||||| Sbjct: 213 tcaggactgggtcacctaagaagcatgaactgaagtccaaacagaagcttgagaagaagc 272 Query: 309 tcagcttctacacaaaagtgaaagatgcagttacctccctaagtgctaaaaagactatca 368 ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||| Sbjct: 273 tcagcttctacacaaaagtgaaagatgcagtaacctccctaaatgctacaaagaatatct 332 Query: 369 gtaagaaaacgaaacagaggagccgtcagaagaaattgaaagcatatgatctctcagcgc 428 | |||||| | |||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 333 gcaagaaatctaaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgc 392 Query: 429 tcactgagttccttccagaaacggctgcctcgaagcagcagacggaagcaaagctgaact 488 || ||||||||||||| ||||| | |||||| || | ||| || |||||||| ||||||| Sbjct: 393 tctctgagttccttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaact 452 Query: 489 gcaaatcgaagcaggatctagtgcaacgggaggctgctcaactgaacgctgtattgaaca 548 ||||||||||||| | | ||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 453 gcaaatcgaagcaagctttagtgcaacgggaggctgcccaactgaatgctgtgctgacca 512 Query: 549 atcctcagttccagatcga 567 |||| ||||||||| |||| Sbjct: 513 atccgcagttccagctcga 531 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 131 bits (66), Expect = 6e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 380 aaacagaggagccgtcagaagaaattgaaagcatatgatctctcagcgctcactgagttc 439 |||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 8000290 aaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgctctctgagttc 8000231 Query: 440 cttccagaaacggctgcctcgaagcagcagacggaagcaaagctgaactgcaaatcgaag 499 ||||| ||||| | |||||| || | ||| || |||||||| |||||||||||||||||| Sbjct: 8000230 cttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaactgcaaatcgaag 8000171 Query: 500 ca 501 || Sbjct: 8000170 ca 8000169 >emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151117 Score = 131 bits (66), Expect = 6e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 380 aaacagaggagccgtcagaagaaattgaaagcatatgatctctcagcgctcactgagttc 439 |||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 143388 aaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgctctctgagttc 143447 Query: 440 cttccagaaacggctgcctcgaagcagcagacggaagcaaagctgaactgcaaatcgaag 499 ||||| ||||| | |||||| || | ||| || |||||||| |||||||||||||||||| Sbjct: 143448 cttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaactgcaaatcgaag 143507 Query: 500 ca 501 || Sbjct: 143508 ca 143509