BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf038f01 (924 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ244364.1| Zea mays clone 5557 mRNA sequence 272 2e-69 gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 260 9e-66 gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 260 9e-66 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 260 9e-66 gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome... 260 9e-66 >gb|DQ244364.1| Zea mays clone 5557 mRNA sequence Length = 824 Score = 272 bits (137), Expect = 2e-69 Identities = 176/189 (93%) Strand = Plus / Plus Query: 424 tacgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcgcggag 483 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| Sbjct: 310 tacgagaagcacgaggcgaagaaggaccccgagcacgcgcacaggcacaagatcacggag 369 Query: 484 gagatcgcggcgacggcggccgtgggcgccggcgggtacgccctccacgagcaccacgag 543 ||| |||| || |||||||||| ||||||||||| |||| ||||||||||||||||| Sbjct: 370 gaggtcgctgccgcggcggccgtcggcgccggcggctacgtattccacgagcaccacgag 429 Query: 544 aagaagaaggaccacaaggacgcccaggaggccagcggcgagaagaagcaccaccacctc 603 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 430 aagaagaaggaccacaaggacgccgaggaggccagcggcgagaagaagcaccaccacctc 489 Query: 604 ttcggctga 612 ||||||||| Sbjct: 490 ttcggctga 498 Score = 99.6 bits (50), Expect = 2e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 200 cgagtacgagaggcaccagaagggggagaagcagcacaagcacaaggagcacctcggcga 259 ||||||||||||| || |||||| ||||||| |||||||||||||| ||||||||||||| Sbjct: 216 cgagtacgagaggtacaagaaggaggagaaggagcacaagcacaagcagcacctcggcga 275 Query: 260 gatgggcaccgtcgccgccggcgccttcgc 289 | ||| || ||||||||||||||||||| Sbjct: 276 ggccggcgccatcgccgccggcgccttcgc 305 >gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 260 bits (131), Expect = 9e-66 Identities = 178/193 (92%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 422 agtacgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcgcgg 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 55606 agtatgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcacgg 55665 Query: 482 aggagatcgcggcgacggcggccgtgggcgccggcgggtacgccctccacgagcaccacg 541 ||||||||||||| |||||||| || ||||||||||| |||||| ||||||||||||||| Sbjct: 55666 aggagatcgcggccacggcggcggtcggcgccggcggctacgccttccacgagcaccacg 55725 Query: 542 agaagaagaaggaccacaaggacgcccaggaggccagcggcgagaagaagcaccaccacc 601 |||||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||||| Sbjct: 55726 agaagaagaaggaccacaagagcgccgaggagtccaccggcgagaagaag---caccacc 55782 Query: 602 tcttcggctgatc 614 ||||||||||||| Sbjct: 55783 tcttcggctgatc 55795 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 199 acgagtacgagaggcaccagaagggggagaagcagcacaagcacaaggagcacctcggcg 258 |||||||||||||| || |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 55394 acgagtacgagaggtacaagaaggaggagaagcagcacaagcacaagcagcacctcggcg 55453 Query: 259 agatgggcaccgtcgccgccggcgccttcgc 289 || ||| || ||||||||||||||||||| Sbjct: 55454 aggccggcgccctcgccgccggcgccttcgc 55484 >gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 260 bits (131), Expect = 9e-66 Identities = 178/193 (92%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 422 agtacgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcgcgg 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 154907 agtatgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcacgg 154966 Query: 482 aggagatcgcggcgacggcggccgtgggcgccggcgggtacgccctccacgagcaccacg 541 ||||||||||||| |||||||| || ||||||||||| |||||| ||||||||||||||| Sbjct: 154967 aggagatcgcggccacggcggcggtcggcgccggcggctacgccttccacgagcaccacg 155026 Query: 542 agaagaagaaggaccacaaggacgcccaggaggccagcggcgagaagaagcaccaccacc 601 |||||||||||||||||||| |||| ||||| ||| ||||||||||||| ||||||| Sbjct: 155027 agaagaagaaggaccacaagagcgccgaggagtccaccggcgagaagaag---caccacc 155083 Query: 602 tcttcggctgatc 614 ||||||||||||| Sbjct: 155084 tcttcggctgatc 155096 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 199 acgagtacgagaggcaccagaagggggagaagcagcacaagcacaaggagcacctcggcg 258 |||||||||||||| || |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 154695 acgagtacgagaggtacaagaaggaggagaagcagcacaagcacaagcagcacctcggcg 154754 Query: 259 agatgggcaccgtcgccgccggcgccttcgc 289 || ||| || ||||||||||||||||||| Sbjct: 154755 aggccggcgccctcgccgccggcgccttcgc 154785 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 260 bits (131), Expect = 9e-66 Identities = 178/193 (92%), Gaps = 3/193 (1%) Strand = Plus / Minus Query: 422 agtacgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcgcgg 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3259379 agtatgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcacgg 3259320 Query: 482 aggagatcgcggcgacggcggccgtgggcgccggcgggtacgccctccacgagcaccacg 541 ||||||||||||| |||||||| || ||||||||||| |||||| ||||||||||||||| Sbjct: 3259319 aggagatcgcggccacggcggcggtcggcgccggcggctacgccttccacgagcaccacg 3259260 Query: 542 agaagaagaaggaccacaaggacgcccaggaggccagcggcgagaagaagcaccaccacc 601 |||||||||||||||||||| |||| ||||| ||| |||||||||||||||| |||| Sbjct: 3259259 agaagaagaaggaccacaagagcgccgaggagtccaccggcgagaagaagcac---cacc 3259203 Query: 602 tcttcggctgatc 614 ||||||||||||| Sbjct: 3259202 tcttcggctgatc 3259190 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 199 acgagtacgagaggcaccagaagggggagaagcagcacaagcacaaggagcacctcggcg 258 |||||||||||||| || |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 3259591 acgagtacgagaggtacaagaaggaggagaagcagcacaagcacaagcagcacctcggcg 3259532 Query: 259 agatgggcaccgtcgccgccggcgccttcgc 289 || ||| || ||||||||||||||||||| Sbjct: 3259531 aggccggcgccctcgccgccggcgccttcgc 3259501 >gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 260 bits (131), Expect = 9e-66 Identities = 178/193 (92%), Gaps = 3/193 (1%) Strand = Plus / Minus Query: 422 agtacgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcgcgg 481 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 13593 agtatgagaagcacgaggcgaagaaggacccggagaacgcgcacaggcacaagatcacgg 13534 Query: 482 aggagatcgcggcgacggcggccgtgggcgccggcgggtacgccctccacgagcaccacg 541 ||||||||||||| |||||||| || ||||||||||| |||||| ||||||||||||||| Sbjct: 13533 aggagatcgcggccacggcggcggtcggcgccggcggctacgccttccacgagcaccacg 13474 Query: 542 agaagaagaaggaccacaaggacgcccaggaggccagcggcgagaagaagcaccaccacc 601 |||||||||||||||||||| |||| ||||| ||| |||||||||||||||| |||| Sbjct: 13473 agaagaagaaggaccacaagagcgccgaggagtccaccggcgagaagaagcac---cacc 13417 Query: 602 tcttcggctgatc 614 ||||||||||||| Sbjct: 13416 tcttcggctgatc 13404 Score = 105 bits (53), Expect = 3e-19 Identities = 81/91 (89%) Strand = Plus / Minus Query: 199 acgagtacgagaggcaccagaagggggagaagcagcacaagcacaaggagcacctcggcg 258 |||||||||||||| || |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 13805 acgagtacgagaggtacaagaaggaggagaagcagcacaagcacaagcagcacctcggcg 13746 Query: 259 agatgggcaccgtcgccgccggcgccttcgc 289 || ||| || | ||||||||||||||||| Sbjct: 13745 aggccggcgccctygccgccggcgccttcgc 13715