BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf037p17 (1382 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001074566.1| Oryza sativa (japonica cultivar-group) Os11g... 196 2e-46 gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 196 2e-46 gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 196 2e-46 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 196 2e-46 gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone ... 113 2e-21 >ref|NM_001074566.1| Oryza sativa (japonica cultivar-group) Os11g0539500 (Os11g0539500) mRNA, complete cds Length = 1128 Score = 196 bits (99), Expect = 2e-46 Identities = 201/235 (85%) Strand = Plus / Plus Query: 78 aggacatgctcggagctttcgccctactctataaccacgccttcagctatatcaagccga 137 |||||||| ||||||| ||||| || ||||| |||||| |||||||| |||||||| | Sbjct: 44 aggacatggtcggagccttcgcgctgctctaccaccacgtgttcagctacatcaagccca 103 Query: 138 tggcgctcaagtgcgccgtggatctcggcatccccgacgccatcaacctccgtggtggtg 197 |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || || | Sbjct: 104 tggcgctcaagtgcgccgtggagctcggcatccccgacgcgatccaccgccgcggcggcg 163 Query: 198 ccgccaccctcgccgacatcgccgccgacacggcggtacatgcgtccaagctccccgacc 257 |||||||||| ||| ||||||||||||| || | || || ||||||| ||| |||||| Sbjct: 164 ccgccaccctggccaacatcgccgccgataccggcgtgcacgcgtccagactcaccgacc 223 Query: 258 tccggtgcctgatgaaactgctcagcacgtcgggcatgttcggcgccaccaccgc 312 |||||||||| ||||| ||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 224 tccggtgcctcatgaagctgctcaccacctcgggcatgttcgccgccaccgccgc 278 Score = 188 bits (95), Expect = 4e-44 Identities = 211/249 (84%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 566 gagagccagctcctcatcgaggccgtccttagggaccatggcggcgtcttccacgggctg 625 ||||||||||| || |||||||||||||| |||||||| | |||||| |||| ||||||| Sbjct: 565 gagagccagctgctgatcgaggccgtcctcagggaccacgccggcgtgttccgcgggctg 624 Query: 626 agcacgctggttgacgtcggcggcggccacggcgcgatcgcaaaggccatcgcgagggtt 685 || ||||||| |||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 625 cgctcgctggtcgacgtcggcggcggccacggcgcggtcgccaaggccatcgccgcggcc 684 Query: 686 tttccgcagatcaagtgcaccgtgatggatctccctcacgtcgtaagcgacgcccccg-- 743 || ||| | |||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 685 ttcccggacatcaagtgcaccgtgatggacctcccccacgtcgtcgccgacgcccccgtc 744 Query: 744 -ccgctgatggcaacctgcagttcgtcggcggcaacatgttcgagtccattccaccagcg 802 ||| || ||||||||||| |||||| |||| |||||||| | ||||||||||||||| Sbjct: 745 tccgacgacggcaacctgcatctcgtcgccggcgacatgttccaatccattccaccagcg 804 Query: 803 gatgctgtt 811 || |||||| Sbjct: 805 gacgctgtt 813 >gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 196 bits (99), Expect = 2e-46 Identities = 201/235 (85%) Strand = Plus / Minus Query: 78 aggacatgctcggagctttcgccctactctataaccacgccttcagctatatcaagccga 137 |||||||| ||||||| ||||| || ||||| |||||| |||||||| |||||||| | Sbjct: 134352 aggacatggtcggagccttcgcgctgctctaccaccacgtgttcagctacatcaagccca 134293 Query: 138 tggcgctcaagtgcgccgtggatctcggcatccccgacgccatcaacctccgtggtggtg 197 |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || || | Sbjct: 134292 tggcgctcaagtgcgccgtggagctcggcatccccgacgcgatccaccgccgcggcggcg 134233 Query: 198 ccgccaccctcgccgacatcgccgccgacacggcggtacatgcgtccaagctccccgacc 257 |||||||||| ||| ||||||||||||| || | || || ||||||| ||| |||||| Sbjct: 134232 ccgccaccctggccaacatcgccgccgataccggcgtgcacgcgtccagactcaccgacc 134173 Query: 258 tccggtgcctgatgaaactgctcagcacgtcgggcatgttcggcgccaccaccgc 312 |||||||||| ||||| ||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 134172 tccggtgcctcatgaagctgctcaccacctcgggcatgttcgccgccaccgccgc 134118 Score = 188 bits (95), Expect = 4e-44 Identities = 211/249 (84%), Gaps = 3/249 (1%) Strand = Plus / Minus Query: 566 gagagccagctcctcatcgaggccgtccttagggaccatggcggcgtcttccacgggctg 625 ||||||||||| || |||||||||||||| |||||||| | |||||| |||| ||||||| Sbjct: 133831 gagagccagctgctgatcgaggccgtcctcagggaccacgccggcgtgttccgcgggctg 133772 Query: 626 agcacgctggttgacgtcggcggcggccacggcgcgatcgcaaaggccatcgcgagggtt 685 || ||||||| |||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 133771 cgctcgctggtcgacgtcggcggcggccacggcgcggtcgccaaggccatcgccgcggcc 133712 Query: 686 tttccgcagatcaagtgcaccgtgatggatctccctcacgtcgtaagcgacgcccccg-- 743 || ||| | |||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 133711 ttcccggacatcaagtgcaccgtgatggacctcccccacgtcgtcgccgacgcccccgtc 133652 Query: 744 -ccgctgatggcaacctgcagttcgtcggcggcaacatgttcgagtccattccaccagcg 802 ||| || ||||||||||| |||||| |||| |||||||| | ||||||||||||||| Sbjct: 133651 tccgacgacggcaacctgcatctcgtcgccggcgacatgttccaatccattccaccagcg 133592 Query: 803 gatgctgtt 811 || |||||| Sbjct: 133591 gacgctgtt 133583 >gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 196 bits (99), Expect = 2e-46 Identities = 201/235 (85%) Strand = Plus / Minus Query: 78 aggacatgctcggagctttcgccctactctataaccacgccttcagctatatcaagccga 137 |||||||| ||||||| ||||| || ||||| |||||| |||||||| |||||||| | Sbjct: 33972 aggacatggtcggagccttcgcgctgctctaccaccacgtgttcagctacatcaagccca 33913 Query: 138 tggcgctcaagtgcgccgtggatctcggcatccccgacgccatcaacctccgtggtggtg 197 |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || || | Sbjct: 33912 tggcgctcaagtgcgccgtggagctcggcatccccgacgcgatccaccgccgcggcggcg 33853 Query: 198 ccgccaccctcgccgacatcgccgccgacacggcggtacatgcgtccaagctccccgacc 257 |||||||||| ||| ||||||||||||| || | || || ||||||| ||| |||||| Sbjct: 33852 ccgccaccctggccaacatcgccgccgataccggcgtgcacgcgtccagactcaccgacc 33793 Query: 258 tccggtgcctgatgaaactgctcagcacgtcgggcatgttcggcgccaccaccgc 312 |||||||||| ||||| ||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 33792 tccggtgcctcatgaagctgctcaccacctcgggcatgttcgccgccaccgccgc 33738 Score = 188 bits (95), Expect = 4e-44 Identities = 211/249 (84%), Gaps = 3/249 (1%) Strand = Plus / Minus Query: 566 gagagccagctcctcatcgaggccgtccttagggaccatggcggcgtcttccacgggctg 625 ||||||||||| || |||||||||||||| |||||||| | |||||| |||| ||||||| Sbjct: 33451 gagagccagctgctgatcgaggccgtcctcagggaccacgccggcgtgttccgcgggctg 33392 Query: 626 agcacgctggttgacgtcggcggcggccacggcgcgatcgcaaaggccatcgcgagggtt 685 || ||||||| |||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 33391 cgctcgctggtcgacgtcggcggcggccacggcgcggtcgccaaggccatcgccgcggcc 33332 Query: 686 tttccgcagatcaagtgcaccgtgatggatctccctcacgtcgtaagcgacgcccccg-- 743 || ||| | |||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 33331 ttcccggacatcaagtgcaccgtgatggacctcccccacgtcgtcgccgacgcccccgtc 33272 Query: 744 -ccgctgatggcaacctgcagttcgtcggcggcaacatgttcgagtccattccaccagcg 802 ||| || ||||||||||| |||||| |||| |||||||| | ||||||||||||||| Sbjct: 33271 tccgacgacggcaacctgcatctcgtcgccggcgacatgttccaatccattccaccagcg 33212 Query: 803 gatgctgtt 811 || |||||| Sbjct: 33211 gacgctgtt 33203 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 196 bits (99), Expect = 2e-46 Identities = 201/235 (85%) Strand = Plus / Minus Query: 78 aggacatgctcggagctttcgccctactctataaccacgccttcagctatatcaagccga 137 |||||||| ||||||| ||||| || ||||| |||||| |||||||| |||||||| | Sbjct: 19031154 aggacatggtcggagccttcgcgctgctctaccaccacgtgttcagctacatcaagccca 19031095 Query: 138 tggcgctcaagtgcgccgtggatctcggcatccccgacgccatcaacctccgtggtggtg 197 |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| || || | Sbjct: 19031094 tggcgctcaagtgcgccgtggagctcggcatccccgacgcgatccaccgccgcggcggcg 19031035 Query: 198 ccgccaccctcgccgacatcgccgccgacacggcggtacatgcgtccaagctccccgacc 257 |||||||||| ||| ||||||||||||| || | || || ||||||| ||| |||||| Sbjct: 19031034 ccgccaccctggccaacatcgccgccgataccggcgtgcacgcgtccagactcaccgacc 19030975 Query: 258 tccggtgcctgatgaaactgctcagcacgtcgggcatgttcggcgccaccaccgc 312 |||||||||| ||||| ||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 19030974 tccggtgcctcatgaagctgctcaccacctcgggcatgttcgccgccaccgccgc 19030920 Score = 188 bits (95), Expect = 4e-44 Identities = 211/249 (84%), Gaps = 3/249 (1%) Strand = Plus / Minus Query: 566 gagagccagctcctcatcgaggccgtccttagggaccatggcggcgtcttccacgggctg 625 ||||||||||| || |||||||||||||| |||||||| | |||||| |||| ||||||| Sbjct: 19030633 gagagccagctgctgatcgaggccgtcctcagggaccacgccggcgtgttccgcgggctg 19030574 Query: 626 agcacgctggttgacgtcggcggcggccacggcgcgatcgcaaaggccatcgcgagggtt 685 || ||||||| |||||||||||||||||||||||| |||| ||||||||||| || Sbjct: 19030573 cgctcgctggtcgacgtcggcggcggccacggcgcggtcgccaaggccatcgccgcggcc 19030514 Query: 686 tttccgcagatcaagtgcaccgtgatggatctccctcacgtcgtaagcgacgcccccg-- 743 || ||| | |||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 19030513 ttcccggacatcaagtgcaccgtgatggacctcccccacgtcgtcgccgacgcccccgtc 19030454 Query: 744 -ccgctgatggcaacctgcagttcgtcggcggcaacatgttcgagtccattccaccagcg 802 ||| || ||||||||||| |||||| |||| |||||||| | ||||||||||||||| Sbjct: 19030453 tccgacgacggcaacctgcatctcgtcgccggcgacatgttccaatccattccaccagcg 19030394 Query: 803 gatgctgtt 811 || |||||| Sbjct: 19030393 gacgctgtt 19030385 >gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete sequence Length = 128256 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Minus Query: 135 cgatggcgctcaagtgcgccgtggatctcggcatccccgacgccatcaacctccgtggtg 194 |||||||||||||||||||||| ||||| |||||||||||||| |||||| ||| || | Sbjct: 82699 cgatggcgctcaagtgcgccgtcgatctaggcatccccgacgctgtcaaccgccgcggcg 82640 Query: 195 gtgccgccaccctcgccgacatcgccgccgacacggcggtacatgcgtccaagctccccg 254 | || |||||| ||||||||||||| ||||||| | || ||| | ||||| || ||| Sbjct: 82639 gcgctgccaccgtcgccgacatcgcgaccgacaccggcgtgcatccagccaaggtcgccg 82580 Query: 255 acctccggtgcctgatgaaactgctcagcacgtcgggcatg 295 |||||||| || ||||| | |||||||||||| |||||||| Sbjct: 82579 acctccggcgcatgatggagctgctcagcacgacgggcatg 82539