BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf037m16 (1574 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058471.1| Oryza sativa (japonica cultivar-group) Os03g... 488 e-134 dbj|AK069107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-134 gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 313 1e-81 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 313 1e-81 gb|AY109737.1| Zea mays CL17547_1 mRNA sequence 196 2e-46 >ref|NM_001058471.1| Oryza sativa (japonica cultivar-group) Os03g0854200 (Os03g0854200) mRNA, complete cds Length = 1147 Score = 488 bits (246), Expect = e-134 Identities = 321/346 (92%) Strand = Plus / Plus Query: 60 gaggatggaggggagccgcgcggacgggcggaacccgaaccagctccggccattctcctg 119 ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 61 gaggatggaggagagccgcgcggacgggcggaacccgaaccagctccgccccttctcctg 120 Query: 120 cacccgcaaccccctcgaccgcgcccacggctcggcgcgctgggctcaaggcgacaccat 179 ||| |||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 121 cacacgcaaccctctcgaccgcgcccatggctccgcgcggtgggctcagggggacaccat 180 Query: 180 cgtgctggccgccgtgtacgggcccaagccggggaccaggaagggggagaaccccgagaa 239 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 181 cgtgctcgccgccgtgtacgggccaaagccgggaaccaggaagggggagaatcccgagaa 240 Query: 240 ggcctccatcgaggtcgtctggaagcccatgaccggccagatcgggaagcaagaaaagga 299 ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 241 ggcatccattgaggtcgtctggaagcccatgaccggccagattgggaagcaagagaagga 300 Query: 300 gtatgagatgacactcaagaggactttgcagagcatctgcttgctcactgtccatccaaa 359 |||||||||||| ||||||||||| ||||||||||| ||| |||||||||| |||||||| Sbjct: 301 gtatgagatgacgctcaagaggacattgcagagcatttgcctgctcactgttcatccaaa 360 Query: 360 caccaccacctctgtcatacttcaggttgtgggcgatgatggttct 405 |||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 361 caccaccacctctgtcattcttcaggttgtgggcaatgatggttct 406 Score = 408 bits (206), Expect = e-110 Identities = 323/362 (89%) Strand = Plus / Plus Query: 915 cttcttccgtgtgcaattaatgcttcctgcgctgcccttgtatttgctggaatccctttg 974 |||||||| |||||||||||||||| |||||| |||||||| |||||||| ||||| ||| Sbjct: 407 cttcttccatgtgcaattaatgcttgctgcgcagcccttgtttttgctggcatccccttg 466 Query: 975 aaacatcttgctgttgcaattggctgcggggtgttggaggatggtgcggtgattttggac 1034 ||||||||||| ||||||||||| || || || |||||||||||| |||||||||||| Sbjct: 467 aaacatcttgcagttgcaattggttgtggagtactggaggatggtgaagtgattttggac 526 Query: 1035 acaagcaaggcagaagagcagcaattgaaatcctttgctcatttggtgtttcccaattca 1094 |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 527 acaaacaaagcagaagagcagcaattgaaatcatttgctcatttggtgttccccaattca 586 Query: 1095 cgcaagtctgttgattcaaaagaatcaaaccagaaagatgagcactctgagcgaggattg 1154 |||||||||| | |||||||||| ||||||||||||| ||| | |||||| |||||||| Sbjct: 587 cgcaagtctgctagttcaaaagaaccaaaccagaaagaggaggattctgagagaggattg 646 Query: 1155 ataacttccatcacccatggggtgatgtccgaggacgattatttcaactgtatagagagg 1214 ||||||||||| |||||||| |||||||||||||| |||||||||| ||| ||||||||| Sbjct: 647 ataacttccattacccatggagtgatgtccgaggaagattatttcagctgcatagagagg 706 Query: 1215 ggtcttgctgcgtcctcgcgaatctcagattttatgaggacatccttgcagaagcaggca 1274 || |||||||| || || || ||||| ||||||||||||||| | ||||||||||||||| Sbjct: 707 ggccttgctgcatcgtcacggatctcggattttatgaggacaacattgcagaagcaggca 766 Query: 1275 cc 1276 || Sbjct: 767 cc 768 >dbj|AK069107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009H04, full insert sequence Length = 1151 Score = 488 bits (246), Expect = e-134 Identities = 321/346 (92%) Strand = Plus / Plus Query: 60 gaggatggaggggagccgcgcggacgggcggaacccgaaccagctccggccattctcctg 119 ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 63 gaggatggaggagagccgcgcggacgggcggaacccgaaccagctccgccccttctcctg 122 Query: 120 cacccgcaaccccctcgaccgcgcccacggctcggcgcgctgggctcaaggcgacaccat 179 ||| |||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 123 cacacgcaaccctctcgaccgcgcccatggctccgcgcggtgggctcagggggacaccat 182 Query: 180 cgtgctggccgccgtgtacgggcccaagccggggaccaggaagggggagaaccccgagaa 239 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 183 cgtgctcgccgccgtgtacgggccaaagccgggaaccaggaagggggagaatcccgagaa 242 Query: 240 ggcctccatcgaggtcgtctggaagcccatgaccggccagatcgggaagcaagaaaagga 299 ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 243 ggcatccattgaggtcgtctggaagcccatgaccggccagattgggaagcaagagaagga 302 Query: 300 gtatgagatgacactcaagaggactttgcagagcatctgcttgctcactgtccatccaaa 359 |||||||||||| ||||||||||| ||||||||||| ||| |||||||||| |||||||| Sbjct: 303 gtatgagatgacgctcaagaggacattgcagagcatttgcctgctcactgttcatccaaa 362 Query: 360 caccaccacctctgtcatacttcaggttgtgggcgatgatggttct 405 |||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 363 caccaccacctctgtcattcttcaggttgtgggcaatgatggttct 408 Score = 408 bits (206), Expect = e-110 Identities = 323/362 (89%) Strand = Plus / Plus Query: 915 cttcttccgtgtgcaattaatgcttcctgcgctgcccttgtatttgctggaatccctttg 974 |||||||| |||||||||||||||| |||||| |||||||| |||||||| ||||| ||| Sbjct: 409 cttcttccatgtgcaattaatgcttgctgcgcagcccttgtttttgctggcatccccttg 468 Query: 975 aaacatcttgctgttgcaattggctgcggggtgttggaggatggtgcggtgattttggac 1034 ||||||||||| ||||||||||| || || || |||||||||||| |||||||||||| Sbjct: 469 aaacatcttgcagttgcaattggttgtggagtactggaggatggtgaagtgattttggac 528 Query: 1035 acaagcaaggcagaagagcagcaattgaaatcctttgctcatttggtgtttcccaattca 1094 |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 529 acaaacaaagcagaagagcagcaattgaaatcatttgctcatttggtgttccccaattca 588 Query: 1095 cgcaagtctgttgattcaaaagaatcaaaccagaaagatgagcactctgagcgaggattg 1154 |||||||||| | |||||||||| ||||||||||||| ||| | |||||| |||||||| Sbjct: 589 cgcaagtctgctagttcaaaagaaccaaaccagaaagaggaggattctgagagaggattg 648 Query: 1155 ataacttccatcacccatggggtgatgtccgaggacgattatttcaactgtatagagagg 1214 ||||||||||| |||||||| |||||||||||||| |||||||||| ||| ||||||||| Sbjct: 649 ataacttccattacccatggagtgatgtccgaggaagattatttcagctgcatagagagg 708 Query: 1215 ggtcttgctgcgtcctcgcgaatctcagattttatgaggacatccttgcagaagcaggca 1274 || |||||||| || || || ||||| ||||||||||||||| | ||||||||||||||| Sbjct: 709 ggccttgctgcatcgtcacggatctcggattttatgaggacaacattgcagaagcaggca 768 Query: 1275 cc 1276 || Sbjct: 769 cc 770 >gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 313 bits (158), Expect = 1e-81 Identities = 206/222 (92%) Strand = Plus / Minus Query: 60 gaggatggaggggagccgcgcggacgggcggaacccgaaccagctccggccattctcctg 119 ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 76220 gaggatggaggagagccgcgcggacgggcggaacccgaaccagctccgccccttctcctg 76161 Query: 120 cacccgcaaccccctcgaccgcgcccacggctcggcgcgctgggctcaaggcgacaccat 179 ||| |||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 76160 cacacgcaaccctctcgaccgcgcccatggctccgcgcggtgggctcagggggacaccat 76101 Query: 180 cgtgctggccgccgtgtacgggcccaagccggggaccaggaagggggagaaccccgagaa 239 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 76100 cgtgctcgccgccgtgtacgggccaaagccgggaaccaggaagggggagaatcccgagaa 76041 Query: 240 ggcctccatcgaggtcgtctggaagcccatgaccggccagat 281 ||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 76040 ggcatccattgaggtcgtctggaagcccatgaccggccagat 75999 Score = 170 bits (86), Expect = 1e-38 Identities = 122/134 (91%) Strand = Plus / Minus Query: 1052 gcagcaattgaaatcctttgctcatttggtgtttcccaattcacgcaagtctgttgattc 1111 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| Sbjct: 74430 gcagcaattgaaatcatttgctcatttggtgttccccaattcacgcaagtctgctagttc 74371 Query: 1112 aaaagaatcaaaccagaaagatgagcactctgagcgaggattgataacttccatcaccca 1171 ||||||| ||||||||||||| ||| | |||||| ||||||||||||||||||| ||||| Sbjct: 74370 aaaagaaccaaaccagaaagaggaggattctgagagaggattgataacttccattaccca 74311 Query: 1172 tggggtgatgtccg 1185 ||| |||||||||| Sbjct: 74310 tggagtgatgtccg 74297 Score = 151 bits (76), Expect = 1e-32 Identities = 97/104 (93%) Strand = Plus / Minus Query: 283 gggaagcaagaaaaggagtatgagatgacactcaagaggactttgcagagcatctgcttg 342 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct: 75903 gggaagcaagagaaggagtatgagatgacgctcaagaggacattgcagagcatttgcctg 75844 Query: 343 ctcactgtccatccaaacaccaccacctctgtcatacttcaggt 386 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 75843 ctcactgttcatccaaacaccaccacctctgtcattcttcaggt 75800 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 898 tccttgacaatgcctagcttcttccgtgtgcaattaatgcttcctgcgctgcccttgtat 957 |||||||| | | |||||||||||| |||||||||||||||| |||||| |||||||| | Sbjct: 74973 tccttgactaagtctagcttcttccatgtgcaattaatgcttgctgcgcagcccttgttt 74914 Query: 958 ttgctggaatccctttgaaacatcttgc 985 ||||||| ||||| |||||||||||||| Sbjct: 74913 ttgctggcatccccttgaaacatcttgc 74886 Score = 95.6 bits (48), Expect = 5e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 1185 gaggacgattatttcaactgtatagagaggggtcttgctgcgtcctcgcgaatctcagat 1244 ||||| |||||||||| ||| ||||||||||| |||||||| || || || ||||| ||| Sbjct: 74189 gaggaagattatttcagctgcatagagaggggccttgctgcatcgtcacggatctcggat 74130 Query: 1245 tttatgaggacatccttgcagaagcaggcacc 1276 |||||||||||| | ||||||||||||||||| Sbjct: 74129 tttatgaggacaacattgcagaagcaggcacc 74098 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 313 bits (158), Expect = 1e-81 Identities = 206/222 (92%) Strand = Plus / Minus Query: 60 gaggatggaggggagccgcgcggacgggcggaacccgaaccagctccggccattctcctg 119 ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 35768515 gaggatggaggagagccgcgcggacgggcggaacccgaaccagctccgccccttctcctg 35768456 Query: 120 cacccgcaaccccctcgaccgcgcccacggctcggcgcgctgggctcaaggcgacaccat 179 ||| |||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 35768455 cacacgcaaccctctcgaccgcgcccatggctccgcgcggtgggctcagggggacaccat 35768396 Query: 180 cgtgctggccgccgtgtacgggcccaagccggggaccaggaagggggagaaccccgagaa 239 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 35768395 cgtgctcgccgccgtgtacgggccaaagccgggaaccaggaagggggagaatcccgagaa 35768336 Query: 240 ggcctccatcgaggtcgtctggaagcccatgaccggccagat 281 ||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 35768335 ggcatccattgaggtcgtctggaagcccatgaccggccagat 35768294 Score = 170 bits (86), Expect = 1e-38 Identities = 122/134 (91%) Strand = Plus / Minus Query: 1052 gcagcaattgaaatcctttgctcatttggtgtttcccaattcacgcaagtctgttgattc 1111 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| Sbjct: 35766725 gcagcaattgaaatcatttgctcatttggtgttccccaattcacgcaagtctgctagttc 35766666 Query: 1112 aaaagaatcaaaccagaaagatgagcactctgagcgaggattgataacttccatcaccca 1171 ||||||| ||||||||||||| ||| | |||||| ||||||||||||||||||| ||||| Sbjct: 35766665 aaaagaaccaaaccagaaagaggaggattctgagagaggattgataacttccattaccca 35766606 Query: 1172 tggggtgatgtccg 1185 ||| |||||||||| Sbjct: 35766605 tggagtgatgtccg 35766592 Score = 151 bits (76), Expect = 1e-32 Identities = 97/104 (93%) Strand = Plus / Minus Query: 283 gggaagcaagaaaaggagtatgagatgacactcaagaggactttgcagagcatctgcttg 342 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct: 35768198 gggaagcaagagaaggagtatgagatgacgctcaagaggacattgcagagcatttgcctg 35768139 Query: 343 ctcactgtccatccaaacaccaccacctctgtcatacttcaggt 386 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 35768138 ctcactgttcatccaaacaccaccacctctgtcattcttcaggt 35768095 Score = 103 bits (52), Expect = 2e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 898 tccttgacaatgcctagcttcttccgtgtgcaattaatgcttcctgcgctgcccttgtat 957 |||||||| | | |||||||||||| |||||||||||||||| |||||| |||||||| | Sbjct: 35767268 tccttgactaagtctagcttcttccatgtgcaattaatgcttgctgcgcagcccttgttt 35767209 Query: 958 ttgctggaatccctttgaaacatcttgc 985 ||||||| ||||| |||||||||||||| Sbjct: 35767208 ttgctggcatccccttgaaacatcttgc 35767181 Score = 95.6 bits (48), Expect = 5e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 1185 gaggacgattatttcaactgtatagagaggggtcttgctgcgtcctcgcgaatctcagat 1244 ||||| |||||||||| ||| ||||||||||| |||||||| || || || ||||| ||| Sbjct: 35766484 gaggaagattatttcagctgcatagagaggggccttgctgcatcgtcacggatctcggat 35766425 Query: 1245 tttatgaggacatccttgcagaagcaggcacc 1276 |||||||||||| | ||||||||||||||||| Sbjct: 35766424 tttatgaggacaacattgcagaagcaggcacc 35766393 >gb|AY109737.1| Zea mays CL17547_1 mRNA sequence Length = 1133 Score = 196 bits (99), Expect = 2e-46 Identities = 150/167 (89%) Strand = Plus / Minus Query: 77 gcgcggacgggcggaacccgaaccagctccggccattctcctgcacccgcaaccccctcg 136 ||||||| |||||||| ||||||||||||||||| ||| |||||||| | ||||| ||| Sbjct: 1063 gcgcggatgggcggaatccgaaccagctccggccgttcacctgcaccgggaacccgctcc 1004 Query: 137 accgcgcccacggctcggcgcgctgggctcaaggcgacaccatcgtgctggccgccgtgt 196 |||||||||||||||| ||||| ||||| || ||||||||| ||||||||||||| |||| Sbjct: 1003 accgcgcccacggctccgcgcggtgggcgcagggcgacaccgtcgtgctggccgctgtgt 944 Query: 197 acgggcccaagccggggaccaggaagggggagaaccccgagaaggcc 243 |||||||||||||||| ||| ||||||| |||||||||||||||||| Sbjct: 943 acgggcccaagccgggaacccggaagggcgagaaccccgagaaggcc 897 Score = 182 bits (92), Expect = 3e-42 Identities = 125/136 (91%) Strand = Plus / Minus Query: 270 gaccggccagatcgggaagcaagaaaaggagtatgagatgacactcaagaggactttgca 329 ||||||||||||||| | |||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 870 gaccggccagatcggaaggcaagaaagggaatatgagatgacactcaagaggacgttgca 811 Query: 330 gagcatctgcttgctcactgtccatccaaacaccaccacctctgtcatacttcaggttgt 389 |||||||||||||||||| || ||||| |||||||||||||||||| | ||||||||||| Sbjct: 810 gagcatctgcttgctcacagttcatcctaacaccaccacctctgtcgtgcttcaggttgt 751 Query: 390 gggcgatgatggttct 405 ||| |||||||||||| Sbjct: 750 gggtgatgatggttct 735 Score = 149 bits (75), Expect = 4e-32 Identities = 267/331 (80%) Strand = Plus / Minus Query: 924 tgtgcaattaatgcttcctgcgctgcccttgtatttgctggaatccctttgaaacatctt 983 ||||||||||||||||| || ||||| |||| |||||||||||||||| ||||||||||| Sbjct: 725 tgtgcaattaatgcttcttgtgctgctcttgcatttgctggaatccctatgaaacatctt 666 Query: 984 gctgttgcaattggctgcggggtgttggaggatggtgcggtgattttggacacaagcaag 1043 ||||| || ||| |||| || ||| |||| |||||| ||| || || ||||| |||| Sbjct: 665 gctgtcgcgattagctgtggagtgatggacaatggtgtggttatcttagacactagcaga 606 Query: 1044 gcagaagagcagcaattgaaatcctttgctcatttggtgtttcccaattcacgcaagtct 1103 ||||||||||||||| | || |||||||| |||||||||| || || |||||||| Sbjct: 605 gcagaagagcagcaagctaggtcgtttgctcacctggtgtttccgaactcgcgcaagtca 546 Query: 1104 gttgattcaaaagaatcaaaccagaaagatgagcactctgagcgaggattgataacttcc 1163 || || || || || | | ||| ||||||| | || ||||||||||||||||||| | Sbjct: 545 gtcgaatcgaaggacccgacacagcgagatgaggagtccgagcgaggattgataacttgc 486 Query: 1164 atcacccatggggtgatgtccgaggacgattatttcaactgtatagagaggggtcttgct 1223 ||||| ||||| | ||||| ||||| || ||||||||||| |||||||||||| | Sbjct: 485 atcacgcatggagcaatgtctgaggatgactatttcaactgcatagagaggggtgtcatg 426 Query: 1224 gcgtcctcgcgaatctcagattttatgagga 1254 ||||||||| | ||||| ||||| ||||||| Sbjct: 425 gcgtcctcgaggatctcggatttcatgagga 395