BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf037f17 (1009 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK063879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 777 0.0 ref|NM_001063553.1| Oryza sativa (japonica cultivar-group) Os06g... 747 0.0 dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 747 0.0 gb|DQ019627.1| Triticum aestivum pre-mRNA processing factor mRNA... 482 e-132 gb|AY104860.1| Zea mays PCO131393 mRNA sequence 424 e-115 >dbj|AK063879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F06, full insert sequence Length = 894 Score = 777 bits (392), Expect = 0.0 Identities = 635/712 (89%), Gaps = 3/712 (0%) Strand = Plus / Plus Query: 153 cgatggcgcgcctgtacgtcggcaacttggatccccgtgtgacggcccgggagctcgagg 212 ||||||| ||| |||||||||| ||| |||||||||| |||||||| ||||||||||||| Sbjct: 141 cgatggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgagg 200 Query: 213 acgagttccgcgtgtttggggttcttcggagtgtatgggttgcacgaaagccacctggtt 272 ||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||| |||| Sbjct: 201 acgagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtt 260 Query: 273 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatctagatg 332 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 261 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatg 320 Query: 333 gcaagaatgggtggagagttgagctatctcgtaatgctagcagcagtcgcggtggccgtg 392 |||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 321 gcaagaatggatggagagttgagctgtctcgtaatgcaagcagtggtcgtggtggccgtg 380 Query: 393 ataaacatggtgggtctgagatgaagtgctatgaatgtggtgagactgggcactttgctc 452 || | ||||| | ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 381 atcgatatggtagctctgagagcaagtgttatgaatgtggtgagactgggcactttgctc 440 Query: 453 gtgaatgccgtttgaggattggtgctgggggtctaggcagtggaaggcgtcgcagcagga 512 ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 441 gtgaatgccgtttgaggattggttccgggggtctaggcagtggaaggcgtcgtagcagga 500 Query: 513 gccgcagccgcagccggagtcccagataccgtaggagtccaagctatggtagaagaagtt 572 |||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 501 gccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagtt 560 Query: 573 acagccctcaagagcgctctccaaggcgtcgtagcgtgtcaccagctcgtggacgcagct 632 |||||||| || ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 561 acagccctgcagggcgctctccaaggcgtcgtagtgtgtcaccggctcgtgcacgcagct 620 Query: 633 atagcaggtcaccataatataactgtgcccggaatgaacctcccccctatcacaatgggt 692 |||||||||||||| |||| ||| ||| ||| ||||| |||| ||||| | || || | Sbjct: 621 atagcaggtcaccacaatacaaccgtggccgtgatgaatctcctgcctatgataacggat 680 Query: 693 accgccgtagcaggagctagagctaaacctgatgtctgaagagtgctgttacagatattg 752 | ||||| ||||| || ||||||| |||||||||||| |||| |||||||||| || || Sbjct: 681 atcgccgcagcagaagttagagctgaacctgatgtctaaagactgctgttacaaatgtta 740 Query: 753 ctatgtgggttgtcagctatgaacaatgtcctatttgaaagatcgtcgtcgactgcttga 812 || ||||||||||||||||||||||||| |||| | ||| ||| || || ||| || || Sbjct: 741 ctttgtgggttgtcagctatgaacaatgccctactccaaatatcatcatcaact-ctgga 799 Query: 813 ctttggttaaggttctcataactttatctgccttattatgc-ttgtgtttga 863 ||||| |||||||||||||||| |||||| ||||||||||| |||||||||| Sbjct: 800 ctttgattaaggttctcataac-ttatctaccttattatgctttgtgtttga 850 >ref|NM_001063553.1| Oryza sativa (japonica cultivar-group) Os06g0187900 (Os06g0187900) mRNA, complete cds Length = 1424 Score = 747 bits (377), Expect = 0.0 Identities = 569/633 (89%) Strand = Plus / Plus Query: 153 cgatggcgcgcctgtacgtcggcaacttggatccccgtgtgacggcccgggagctcgagg 212 ||||||| ||| |||||||||| ||| |||||||||| |||||||| ||||||||||||| Sbjct: 127 cgatggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgagg 186 Query: 213 acgagttccgcgtgtttggggttcttcggagtgtatgggttgcacgaaagccacctggtt 272 ||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||| |||| Sbjct: 187 acgagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtt 246 Query: 273 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatctagatg 332 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 247 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatg 306 Query: 333 gcaagaatgggtggagagttgagctatctcgtaatgctagcagcagtcgcggtggccgtg 392 |||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 307 gcaagaatggatggagagttgagctgtctcgtaatgcaagcagtggtcgtggtggccgtg 366 Query: 393 ataaacatggtgggtctgagatgaagtgctatgaatgtggtgagactgggcactttgctc 452 || | ||||| | ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 367 atcgatatggtagctctgagagcaagtgttatgaatgtggtgagactgggcactttgctc 426 Query: 453 gtgaatgccgtttgaggattggtgctgggggtctaggcagtggaaggcgtcgcagcagga 512 ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 427 gtgaatgccgtttgaggattggttccgggggtctaggcagtggaaggcgtcgtagcagga 486 Query: 513 gccgcagccgcagccggagtcccagataccgtaggagtccaagctatggtagaagaagtt 572 |||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 487 gccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagtt 546 Query: 573 acagccctcaagagcgctctccaaggcgtcgtagcgtgtcaccagctcgtggacgcagct 632 |||||||| || ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 547 acagccctgcagggcgctctccaaggcgtcgtagtgtgtcaccggctcgtgcacgcagct 606 Query: 633 atagcaggtcaccataatataactgtgcccggaatgaacctcccccctatcacaatgggt 692 |||||||||||||| |||| ||| ||| ||| ||||| |||| ||||| | || || | Sbjct: 607 atagcaggtcaccacaatacaaccgtggccgtgatgaatctcctgcctatgataacggat 666 Query: 693 accgccgtagcaggagctagagctaaacctgatgtctgaagagtgctgttacagatattg 752 | ||||| ||||| || ||||||| |||||||||||| |||| |||||||||| || || Sbjct: 667 atcgccgcagcagaagttagagctgaacctgatgtctaaagactgctgttacaaatgtta 726 Query: 753 ctatgtgggttgtcagctatgaacaatgtccta 785 || ||||||||||||||||||||||||| |||| Sbjct: 727 ctttgtgggttgtcagctatgaacaatgcccta 759 >dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N11, full insert sequence Length = 1425 Score = 747 bits (377), Expect = 0.0 Identities = 569/633 (89%) Strand = Plus / Plus Query: 153 cgatggcgcgcctgtacgtcggcaacttggatccccgtgtgacggcccgggagctcgagg 212 ||||||| ||| |||||||||| ||| |||||||||| |||||||| ||||||||||||| Sbjct: 128 cgatggcccgcgtgtacgtcggaaacctggatccccgcgtgacggcgcgggagctcgagg 187 Query: 213 acgagttccgcgtgtttggggttcttcggagtgtatgggttgcacgaaagccacctggtt 272 ||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||| |||| Sbjct: 188 acgagttccgcgtctttggagttcttcggagtgtatgggtcgcaagaaagccaccaggtt 247 Query: 273 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatctagatg 332 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 248 ttgcattcattgattttgatgacaggagggatgctcaggatgcaattcgtgatatagatg 307 Query: 333 gcaagaatgggtggagagttgagctatctcgtaatgctagcagcagtcgcggtggccgtg 392 |||||||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||| Sbjct: 308 gcaagaatggatggagagttgagctgtctcgtaatgcaagcagtggtcgtggtggccgtg 367 Query: 393 ataaacatggtgggtctgagatgaagtgctatgaatgtggtgagactgggcactttgctc 452 || | ||||| | ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 368 atcgatatggtagctctgagagcaagtgttatgaatgtggtgagactgggcactttgctc 427 Query: 453 gtgaatgccgtttgaggattggtgctgggggtctaggcagtggaaggcgtcgcagcagga 512 ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 428 gtgaatgccgtttgaggattggttccgggggtctaggcagtggaaggcgtcgtagcagga 487 Query: 513 gccgcagccgcagccggagtcccagataccgtaggagtccaagctatggtagaagaagtt 572 |||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 488 gccgcagccgcagccgaagtcccaggtaccgcaggagtccaagctatggcagaagaagtt 547 Query: 573 acagccctcaagagcgctctccaaggcgtcgtagcgtgtcaccagctcgtggacgcagct 632 |||||||| || ||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct: 548 acagccctgcagggcgctctccaaggcgtcgtagtgtgtcaccggctcgtgcacgcagct 607 Query: 633 atagcaggtcaccataatataactgtgcccggaatgaacctcccccctatcacaatgggt 692 |||||||||||||| |||| ||| ||| ||| ||||| |||| ||||| | || || | Sbjct: 608 atagcaggtcaccacaatacaaccgtggccgtgatgaatctcctgcctatgataacggat 667 Query: 693 accgccgtagcaggagctagagctaaacctgatgtctgaagagtgctgttacagatattg 752 | ||||| ||||| || ||||||| |||||||||||| |||| |||||||||| || || Sbjct: 668 atcgccgcagcagaagttagagctgaacctgatgtctaaagactgctgttacaaatgtta 727 Query: 753 ctatgtgggttgtcagctatgaacaatgtccta 785 || ||||||||||||||||||||||||| |||| Sbjct: 728 ctttgtgggttgtcagctatgaacaatgcccta 760 >gb|DQ019627.1| Triticum aestivum pre-mRNA processing factor mRNA, complete cds Length = 780 Score = 482 bits (243), Expect = e-132 Identities = 457/530 (86%), Gaps = 15/530 (2%) Strand = Plus / Plus Query: 107 cgtcgcgtccctggagacagaccgcagaaggtagggtggtcggctacgatggcgcgcctg 166 ||||||||||||| || ||||||| |||||| |||| |||| ||| ||||||||||| || Sbjct: 53 cgtcgcgtccctgcaggcagaccggagaaggcaggggggtccgctgcgatggcgcgcgtg 112 Query: 167 tacgtcggcaacttggatccccgtgtgacggcccgggagctcgaggacgagttccgcgtg 226 |||||||| | | |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 113 tacgtcgggagcctggaccctgctgtgacggcccgggagctcgaggacgagttccgcgtg 172 Query: 227 tttggggttcttcggagtgtatgggttgcacgaaagccacctggttttgcattcattgat 286 || |||||||| |||||||||||||||||| | |||||||||||||||||||| ||||| Sbjct: 173 ttcggggttctccggagtgtatgggttgcaaggaagccacctggttttgcatttgttgat 232 Query: 287 tttgatgacaggagggatgctcaggatgcaattcgtgatctagatggcaagaatgggtgg 346 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| Sbjct: 233 tttgatgacaggagggatgctcaggatgcaattaaagatttagatggcaagaatggttgg 292 Query: 347 agagttgagctatctcgtaatgctagcagcagtcgcggtggccgtgataaacatggtggg 406 ||||||||| | ||||||||||| ||||| | || ||||| |||||| | |||||| Sbjct: 293 agagttgagttgtctcgtaatgccagcagtggccgtggtggtcgtgatcgatctggtgga 352 Query: 407 tctgagatgaagtgctatgaatgtggtgagactgggcactttgctcgtgaatgccgtttg 466 |||||||||||||| ||||| ||||||||| |||| |||||||| |||||||||||| || Sbjct: 353 tctgagatgaagtgttatgagtgtggtgagtctggtcactttgcccgtgaatgccgtctg 412 Query: 467 aggattggtgctgggggtctaggcagtggaaggcgtcgcagcagg------agccgcagc 520 ||||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 413 aggattggttctgggggcctaggcagtggaaggcgtcgcagcaggagtcgaagccgtagc 472 Query: 521 cgcagccggagtcccagataccgtaggagtccaagctatggtagaagaagttacagccct 580 ||||| ||||| || |||||||| ||||||||||||||| | |||||||| |||||| Sbjct: 473 cgcagtcggagccctagataccgcaggagtccaagctatagcagaagaagctacagc--- 529 Query: 581 caagagcgctctccaaggcgtcgtagcgtgtcaccagctcgtggacgcag 630 |||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 530 ------cgctctccaaggcgtcgtagtgtgtcaccggctcgtgggcgcag 573 >gb|AY104860.1| Zea mays PCO131393 mRNA sequence Length = 1093 Score = 424 bits (214), Expect = e-115 Identities = 415/482 (86%) Strand = Plus / Plus Query: 165 tgtacgtcggcaacttggatccccgtgtgacggcccgggagctcgaggacgagttccgcg 224 ||||| |||||||| |||||||||| ||||| || |||||||| ||||||||||||||| Sbjct: 188 tgtacatcggcaacctggatccccgggtgaccgctcgggagctggaggacgagttccgca 247 Query: 225 tgtttggggttcttcggagtgtatgggttgcacgaaagccacctggttttgcattcattg 284 ||| ||||||||||| ||||| |||||||| || || |||||||| ||||| || |||| Sbjct: 248 cgttcggggttcttcgcagtgtctgggttgctcggaaaccacctggctttgcgtttattg 307 Query: 285 attttgatgacaggagggatgctcaggatgcaattcgtgatctagatggcaagaatgggt 344 |||||||||| | |||||| || |||||||||| ||||| ||||||||||||||||| | Sbjct: 308 attttgatgataagagggacgcagaggatgcaatccgtgacctagatggcaagaatggat 367 Query: 345 ggagagttgagctatctcgtaatgctagcagcagtcgcggtggccgtgataaacatggtg 404 ||||||||||| ||||||||||||| ||| | |||| || || ||||| ||||||| Sbjct: 368 ggagagttgagttatctcgtaatgccagcggtggtcgtggaggtcgtgaccggcatggtg 427 Query: 405 ggtctgagatgaagtgctatgaatgtggtgagactgggcactttgctcgtgaatgccgtt 464 |||||||| ||||| || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 428 ggtctgagtccaagtgttacgagtgtggtgagactggccactttgctcgtgagtgccgtt 487 Query: 465 tgaggattggtgctgggggtctaggcagtggaaggcgtcgcagcaggagccgcagccgca 524 ||||||||||| |||| ||||||||||| |||||||| || ||| | ||||| ||||||| Sbjct: 488 tgaggattggttctggaggtctaggcagcggaaggcgccgaagccgtagccgtagccgca 547 Query: 525 gccggagtcccagataccgtaggagtccaagctatggtagaagaagttacagccctcaag 584 | || ||||||||||| || |||||||||| || |||||||| |||||||| ||| || Sbjct: 548 gtcgcagtcccagatatcgccggagtccaagttacggtagaaggagttacagtcctgcag 607 Query: 585 agcgctctccaaggcgtcgtagcgtgtcaccagctcgtggacgcagctatagcaggtcac 644 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 608 cacgctctccaaggcgtcgtagcgtctcaccagctcgtggacgcagctatagcaggtcac 667 Query: 645 ca 646 || Sbjct: 668 ca 669 Score = 81.8 bits (41), Expect = 5e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 969 ctgcactgcttaaacgactcggccgactacggctttcagtt 1009 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 ctgcactgcttaaacgactcggccgactacggctttcagtt 886