BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf036o24 (911 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF050674.1|AF050674 Oryza sativa ribosomal protein L27 precur... 611 e-171 emb|CT830118.1| Oryza sativa (indica cultivar-group) cDNA clone:... 603 e-169 ref|NM_001051779.1| Oryza sativa (japonica cultivar-group) Os01g... 603 e-169 dbj|AK061690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 603 e-169 gb|DQ244351.1| Zea mays clone 5351 mRNA sequence 500 e-138 >gb|AF050674.1|AF050674 Oryza sativa ribosomal protein L27 precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 727 Score = 611 bits (308), Expect = e-171 Identities = 413/448 (92%) Strand = Plus / Plus Query: 178 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 237 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 223 Query: 238 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 297 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 224 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 283 Query: 298 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 343 Query: 358 gaatgggcaaggatcacacgctcttttctttgattgatggacttgtcaagtttgagaaat 417 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 344 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 403 Query: 418 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 477 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 404 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 463 Query: 478 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacacaagaaggcaa 537 |||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||| Sbjct: 464 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 523 Query: 538 gagcagagggaactgttgaactgcaattgatattggcagctgcagatgaaaattctgagg 597 |||||||||||| |||||| |||||||| | ||||||||||||||||||| | |||||| Sbjct: 524 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 583 Query: 598 tcaatgcagactgctgataagttttctg 625 |||||||||||||||||||||||||||| Sbjct: 584 tcaatgcagactgctgataagttttctg 611 Score = 99.6 bits (50), Expect = 2e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 56 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 115 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 15 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 74 Query: 116 cc 117 || Sbjct: 75 cc 76 >emb|CT830118.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039B08, full insert sequence Length = 708 Score = 603 bits (304), Expect = e-169 Identities = 412/448 (91%) Strand = Plus / Plus Query: 178 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 237 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 165 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 224 Query: 238 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 297 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 225 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 284 Query: 298 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 344 Query: 358 gaatgggcaaggatcacacgctcttttctttgattgatggacttgtcaagtttgagaaat 417 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 345 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 404 Query: 418 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 477 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 405 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 464 Query: 478 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacacaagaaggcaa 537 |||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||| Sbjct: 465 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 524 Query: 538 gagcagagggaactgttgaactgcaattgatattggcagctgcagatgaaaattctgagg 597 |||||||||||| |||||| |||||||| | ||||||||||||||||||| | |||||| Sbjct: 525 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 584 Query: 598 tcaatgcagactgctgataagttttctg 625 ||||||||||||||||||||||| |||| Sbjct: 585 tcaatgcagactgctgataagttctctg 612 Score = 95.6 bits (48), Expect = 3e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 56 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 115 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 16 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 75 >ref|NM_001051779.1| Oryza sativa (japonica cultivar-group) Os01g0924000 (Os01g0924000) mRNA, complete cds Length = 744 Score = 603 bits (304), Expect = e-169 Identities = 412/448 (91%) Strand = Plus / Plus Query: 178 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 237 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 201 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 260 Query: 238 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 297 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 261 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 320 Query: 298 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 380 Query: 358 gaatgggcaaggatcacacgctcttttctttgattgatggacttgtcaagtttgagaaat 417 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 381 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 440 Query: 418 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 477 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 441 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 500 Query: 478 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacacaagaaggcaa 537 |||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||| Sbjct: 501 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 560 Query: 538 gagcagagggaactgttgaactgcaattgatattggcagctgcagatgaaaattctgagg 597 |||||||||||| |||||| |||||||| | ||||||||||||||||||| | |||||| Sbjct: 561 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 620 Query: 598 tcaatgcagactgctgataagttttctg 625 ||||||||||||||||||||||| |||| Sbjct: 621 tcaatgcagactgctgataagttctctg 648 Score = 99.6 bits (50), Expect = 2e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 56 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 115 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 52 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 111 Query: 116 cc 117 || Sbjct: 112 cc 113 >dbj|AK061690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B10, full insert sequence Length = 744 Score = 603 bits (304), Expect = e-169 Identities = 412/448 (91%) Strand = Plus / Plus Query: 178 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 237 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 201 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 260 Query: 238 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 297 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 261 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 320 Query: 298 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 380 Query: 358 gaatgggcaaggatcacacgctcttttctttgattgatggacttgtcaagtttgagaaat 417 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 381 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 440 Query: 418 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 477 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 441 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 500 Query: 478 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacacaagaaggcaa 537 |||||||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||| Sbjct: 501 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 560 Query: 538 gagcagagggaactgttgaactgcaattgatattggcagctgcagatgaaaattctgagg 597 |||||||||||| |||||| |||||||| | ||||||||||||||||||| | |||||| Sbjct: 561 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 620 Query: 598 tcaatgcagactgctgataagttttctg 625 ||||||||||||||||||||||| |||| Sbjct: 621 tcaatgcagactgctgataagttctctg 648 Score = 99.6 bits (50), Expect = 2e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 56 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 115 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 52 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 111 Query: 116 cc 117 || Sbjct: 112 cc 113 >gb|DQ244351.1| Zea mays clone 5351 mRNA sequence Length = 763 Score = 500 bits (252), Expect = e-138 Identities = 417/472 (88%) Strand = Plus / Plus Query: 172 tgccgctgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagca 231 ||||| ||||||||||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 206 tgccggtgccggcgcggcggctcaccatccagatggcgcacaagaagggggccgggagca 265 Query: 232 ccaagaatgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagc 291 ||||||| || | ||||||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 266 ccaagaacggccgcgactccaagggacagcgcctcggggtcaagatatacggcgaccagc 325 Query: 292 tcgccaagcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaata 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 tcgccaagcccggggccatcatcatccgccagcgcggcaccagggtctatcctggaaata 385 Query: 352 atgttggaatgggcaaggatcacacgctcttttctttgattgatggacttgtcaagtttg 411 | ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| Sbjct: 386 acgttggaatgggcaaggatcacacactcttttctttgatagatggactcgtcaagtttg 445 Query: 412 agaaatatggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgaga 471 |||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||||| | Sbjct: 446 agaagtatgggccggacaagaaaaaggttagtgtttacccatatgagaaggagcctgaaa 505 Query: 472 acccgaacagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacacaaga 531 |||| |||||||||||||||||||| |||||||||||||| |||| |||||||| |||| Sbjct: 506 acccaaacagttacagagcaaggaagagagagtacttccgcatgcggcgtgaacggaaga 565 Query: 532 aggcaagagcagagggaactgttgaactgcaattgatattggcagctgcagatgaaaatt 591 |||| ||||| ||||| | | ||| | || ||| || | || |||| |||||||| | Sbjct: 566 aggcgagagcggagggcgccgctgagcctcagttggtactagctgctgttgatgaaaact 625 Query: 592 ctgaggtcaatgcagactgctgataagttttctgtattgtacttctcttttt 643 ||||||||| || |||||||||||||||| |||| | || |||||||||| Sbjct: 626 ctgaggtcagcgcggactgctgataagtttcctgtgtggtgtttctcttttt 677