BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf036j16 (968 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK242975.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 293 7e-76 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 194 5e-46 dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 194 5e-46 dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 194 5e-46 gb|AY110089.1| Zea mays CL25474_1 mRNA sequence 101 5e-18 >dbj|AK242975.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090092I02, full insert sequence Length = 1835 Score = 293 bits (148), Expect = 7e-76 Identities = 268/308 (87%) Strand = Plus / Plus Query: 311 gccgccctcttcgctatgccgtcctcggcgccggcttcgcgggtctctccgtcgcgtgga 370 |||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 182 gccgccctctccgctacgccgtcctcggcgccgggttcgcggggctctccgtcgcttggc 241 Query: 371 acctcctcaagcatagcccgaaggattcccgcgtgtccgtggacatgtatgacgagaacg 430 ||||||||||| ||||||| |||| |||||||||| ||| ||||| || ||||||| || Sbjct: 242 acctcctcaagtatagccccaagggttcccgcgtgcgcgtcgacatctacgacgagagcg 301 Query: 431 gggtcgggggaggcgcttcgggagtttccggagggcttctccatccatactcacccaaag 490 | |||| || ||||| ||||| |||||||| ||||||||||| || |||||||| |||| Sbjct: 302 gcatcggcggtggcgcatcgggcgtttccggggggcttctccacccgtactcacctaaag 361 Query: 491 tgaagcttctctggaggggtgctgaattctggaaagagtgtatggatctcctgcataggg 550 |||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | | | Sbjct: 362 tgaagcttctatggaagggtgctgaattctggaaagagtgtatggatctgctgcgttgcg 421 Query: 551 tggagcaagcgaatggaaccactggatcagatataactagtcaagatgagacccttatct 610 |||||||||||||||| || |||| ||||| | |||| ||||||||||||||||||| Sbjct: 422 cggagcaagcgaatggagccgctggggcagatggagctagccaagatgagacccttatct 481 Query: 611 ggagaagg 618 |||||||| Sbjct: 482 ggagaagg 489 Score = 266 bits (134), Expect = 2e-67 Identities = 215/242 (88%) Strand = Plus / Plus Query: 714 aggggaattctacgaccacctacaactgagaaggctgcagacatattgctggagaatgct 773 ||||||||| |||| || ||||||| ||||| |||| ||||||||||||||||||||| Sbjct: 487 aggggaattatacggccgcctacaagcgagaaaactgctgacatattgctggagaatgct 546 Query: 774 cagagttgcctccagagttgcagccttcaagttcttgattcggatgctgcacaacgtctg 833 ||||||| ||||||||||||||||||||||||||||||||| || | ||||| ||||| Sbjct: 547 cagagttccctccagagttgcagccttcaagttcttgattcagacgaggcacagtgtctg 606 Query: 834 gtccctgggttatgtgttccgtttaaccttgcagtttatatgccactagcactgaacatc 893 |||||||||||||||||||||| ||| |||||||||| |||||| |||| ||||||||| Sbjct: 607 atccctgggttatgtgttccgttgaactttgcagtttacatgccattagcgctgaacatc 666 Query: 894 aaccctaagaaatatttacaggcattattctttgcatgccaaaatctggctgacgaagca 953 ||||||||||||||||||||||| || ||||| |||||||||||| || |||| |||||| Sbjct: 667 aaccctaagaaatatttacaggctttgttcttcgcatgccaaaatatgtctgatgaagca 726 Query: 954 tc 955 || Sbjct: 727 tc 728 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 194 bits (98), Expect = 5e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 766 agaatgctcagagttgcctccagagttgcagccttcaagttcttgattcggatgctgcac 825 ||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||| Sbjct: 4031662 agaatgctcagagttccctccagagttgcagccttcaagttcttgattcagacgaggcac 4031721 Query: 826 aacgtctggtccctgggttatgtgttccgtttaaccttgcagtttatatgccactagcac 885 | ||||| |||||||||||||||||||||| ||| |||||||||| |||||| |||| | Sbjct: 4031722 agtgtctgatccctgggttatgtgttccgttgaactttgcagtttacatgccattagcgc 4031781 Query: 886 tgaacatcaaccctaagaaatatttacagg 915 |||||||||||||||||||||||||||||| Sbjct: 4031782 tgaacatcaaccctaagaaatatttacagg 4031811 Score = 155 bits (78), Expect = 4e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 489 agtgaagcttctctggaggggtgctgaattctggaaagagtgtatggatctcctgcatag 548 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | | Sbjct: 4031263 agtgaagcttctatggaagggtgctgaattctggaaagagtgtatggatctgctgcgttg 4031322 Query: 549 ggtggagcaagcgaatggaaccactggatcagatataactagtcaagatgagacccttat 608 | |||||||||||||||| || |||| ||||| | |||| ||||||||||||||||| Sbjct: 4031323 cgcggagcaagcgaatggagccgctggggcagatggagctagccaagatgagacccttat 4031382 Query: 609 ctggagaaggcaatccgtttttctttgtag 638 |||||||||||||| | || |||||||||| Sbjct: 4031383 ctggagaaggcaattccttgttctttgtag 4031412 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 311 gccgccctcttcgctatgccgtcctcggcgccggcttcgcgggtctctccgtcgcgtgga 370 |||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 4030842 gccgccctctccgctacgccgtcctcggcgccgggttcgcggggctctccgtcgcttggc 4030901 Query: 371 acctcctcaag 381 ||||||||||| Sbjct: 4030902 acctcctcaag 4030912 >dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 194 bits (98), Expect = 5e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 766 agaatgctcagagttgcctccagagttgcagccttcaagttcttgattcggatgctgcac 825 ||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||| Sbjct: 75317 agaatgctcagagttccctccagagttgcagccttcaagttcttgattcagacgaggcac 75376 Query: 826 aacgtctggtccctgggttatgtgttccgtttaaccttgcagtttatatgccactagcac 885 | ||||| |||||||||||||||||||||| ||| |||||||||| |||||| |||| | Sbjct: 75377 agtgtctgatccctgggttatgtgttccgttgaactttgcagtttacatgccattagcgc 75436 Query: 886 tgaacatcaaccctaagaaatatttacagg 915 |||||||||||||||||||||||||||||| Sbjct: 75437 tgaacatcaaccctaagaaatatttacagg 75466 Score = 155 bits (78), Expect = 4e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 489 agtgaagcttctctggaggggtgctgaattctggaaagagtgtatggatctcctgcatag 548 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | | Sbjct: 74918 agtgaagcttctatggaagggtgctgaattctggaaagagtgtatggatctgctgcgttg 74977 Query: 549 ggtggagcaagcgaatggaaccactggatcagatataactagtcaagatgagacccttat 608 | |||||||||||||||| || |||| ||||| | |||| ||||||||||||||||| Sbjct: 74978 cgcggagcaagcgaatggagccgctggggcagatggagctagccaagatgagacccttat 75037 Query: 609 ctggagaaggcaatccgtttttctttgtag 638 |||||||||||||| | || |||||||||| Sbjct: 75038 ctggagaaggcaattccttgttctttgtag 75067 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 311 gccgccctcttcgctatgccgtcctcggcgccggcttcgcgggtctctccgtcgcgtgga 370 |||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 74497 gccgccctctccgctacgccgtcctcggcgccgggttcgcggggctctccgtcgcttggc 74556 Query: 371 acctcctcaag 381 ||||||||||| Sbjct: 74557 acctcctcaag 74567 >dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 194 bits (98), Expect = 5e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 766 agaatgctcagagttgcctccagagttgcagccttcaagttcttgattcggatgctgcac 825 ||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||| Sbjct: 137538 agaatgctcagagttccctccagagttgcagccttcaagttcttgattcagacgaggcac 137597 Query: 826 aacgtctggtccctgggttatgtgttccgtttaaccttgcagtttatatgccactagcac 885 | ||||| |||||||||||||||||||||| ||| |||||||||| |||||| |||| | Sbjct: 137598 agtgtctgatccctgggttatgtgttccgttgaactttgcagtttacatgccattagcgc 137657 Query: 886 tgaacatcaaccctaagaaatatttacagg 915 |||||||||||||||||||||||||||||| Sbjct: 137658 tgaacatcaaccctaagaaatatttacagg 137687 Score = 155 bits (78), Expect = 4e-34 Identities = 132/150 (88%) Strand = Plus / Plus Query: 489 agtgaagcttctctggaggggtgctgaattctggaaagagtgtatggatctcctgcatag 548 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | | Sbjct: 137139 agtgaagcttctatggaagggtgctgaattctggaaagagtgtatggatctgctgcgttg 137198 Query: 549 ggtggagcaagcgaatggaaccactggatcagatataactagtcaagatgagacccttat 608 | |||||||||||||||| || |||| ||||| | |||| ||||||||||||||||| Sbjct: 137199 cgcggagcaagcgaatggagccgctggggcagatggagctagccaagatgagacccttat 137258 Query: 609 ctggagaaggcaatccgtttttctttgtag 638 |||||||||||||| | || |||||||||| Sbjct: 137259 ctggagaaggcaattccttgttctttgtag 137288 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 311 gccgccctcttcgctatgccgtcctcggcgccggcttcgcgggtctctccgtcgcgtgga 370 |||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 136718 gccgccctctccgctacgccgtcctcggcgccgggttcgcggggctctccgtcgcttggc 136777 Query: 371 acctcctcaag 381 ||||||||||| Sbjct: 136778 acctcctcaag 136788 >gb|AY110089.1| Zea mays CL25474_1 mRNA sequence Length = 1414 Score = 101 bits (51), Expect = 5e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 866 agtttatatgccactagcactgaacatcaaccctaagaaatatttacaggcattattctt 925 |||||| |||||||| ||||||||||||||||||||||||||| | |||||| | |||| Sbjct: 1299 agtttacatgccactggcactgaacatcaaccctaagaaatatctgcaggcactgttctc 1240 Query: 926 tgcatgccaaaatctggctgacgaagc 952 |||||||||||||||||| || ||||| Sbjct: 1239 tgcatgccaaaatctggcagatgaagc 1213