BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf036g16 (1703 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051573.1| Oryza sativa (japonica cultivar-group) Os01g... 662 0.0 dbj|AK102902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 648 0.0 ref|NM_001062103.1| Oryza sativa (japonica cultivar-group) Os05g... 615 e-172 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 341 6e-90 dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 341 6e-90 >ref|NM_001051573.1| Oryza sativa (japonica cultivar-group) Os01g0888300 (Os01g0888300) mRNA, complete cds Length = 1621 Score = 662 bits (334), Expect = 0.0 Identities = 445/482 (92%) Strand = Plus / Plus Query: 367 gaggacgacctggtgatgccggggttccggttccacccgacggaggaggagctcatcgag 426 ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct: 282 gaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgag 341 Query: 427 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 401 Query: 487 gacctctaccgctacgacccctgggacctcccagcaatggccgcgattggggagaaggag 546 |||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 402 gacctctaccgctacgacccctgggagctccccgcaatggcggcgataggggagaaggag 461 Query: 547 tggttcttctatgtgccgagggaccgcaagtaccggaacggggaccggccgaaccgggtg 606 ||||||||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 462 tggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtg 521 Query: 607 accgcgtcggggtactggaaggcgacgggtgccgaccggatgatccgtgcggagaaccac 666 || |||||||||||||||||||||||||| ||||||||||||||||| || |||||| || Sbjct: 522 acggcgtcggggtactggaaggcgacgggggccgaccggatgatccgagccgagaacaac 581 Query: 667 cggccgatagggcttaagaagacgctcgtcttctactccggcaaggcgcccaagggcgtc 726 || || || ||||| ||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 582 cgccccatcgggctcaagaagacgcttgtcttctactccggcaaggcccccaagggcgtc 641 Query: 727 cgcagaagctggatcatgaacgagtaccgcctcccgaccgcagacaccgaccgctaccac 786 ||||| |||||||||||||||||||| ||||| || |||| |||||||||||||||||| Sbjct: 642 cgcagcagctggatcatgaacgagtatcgccttccccccgccgacaccgaccgctaccac 701 Query: 787 aagaccgaaatctctctctgccgcgtctacaagcgctccggcatcgacgacggccacggc 846 ||||| |||||||| || |||||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 702 aagactgaaatctcactatgccgcgtgtacaagcgcaccggcatcgacgacggccatggc 761 Query: 847 ca 848 || Sbjct: 762 ca 763 Score = 139 bits (70), Expect = 4e-29 Identities = 120/136 (88%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 1133 attgtaccagcagtacaccaagaacacgaacg---ccttcacctccacgtactcgctcct 1189 |||||||||||||||| |||||||||||| || ||||| |||||||||||||||| || Sbjct: 1097 attgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgct 1156 Query: 1190 caacctggtgaacgcggcctccatgggcagctccgccgcggcctttgacgagttgagcac 1249 |||||| || |||||||| |||||||||||||||||||| ||| |||| ||| ||||| | Sbjct: 1157 caacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctc 1216 Query: 1250 actggtgggccacggc 1265 ||||||||||||||| Sbjct: 1217 gctggtgggccacggc 1232 >dbj|AK102902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113D13, full insert sequence Length = 1631 Score = 648 bits (327), Expect = 0.0 Identities = 445/483 (92%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 367 gaggacgacctggtgatgccggggttccggttccacccgacggaggaggagctcatcgag 426 ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct: 291 gaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgag 350 Query: 427 ttctacc-tccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcct 485 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ttctaccctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcct 410 Query: 486 cgacctctaccgctacgacccctgggacctcccagcaatggccgcgattggggagaagga 545 ||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 411 cgacctctaccgctacgacccctgggagctccccgcaatggcggcgataggggagaagga 470 Query: 546 gtggttcttctatgtgccgagggaccgcaagtaccggaacggggaccggccgaaccgggt 605 |||||||||||| ||||| ||||| | |||||| ||||||||||||||||||||||||| Sbjct: 471 gtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggt 530 Query: 606 gaccgcgtcggggtactggaaggcgacgggtgccgaccggatgatccgtgcggagaacca 665 ||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||| | Sbjct: 531 gacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgagccgagaacaa 590 Query: 666 ccggccgatagggcttaagaagacgctcgtcttctactccggcaaggcgcccaagggcgt 725 ||| || || ||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 591 ccgccccatcgggctcaagaagacgcttgtcttctactccggcaaggcccccaagggcgt 650 Query: 726 ccgcagaagctggatcatgaacgagtaccgcctcccgaccgcagacaccgaccgctacca 785 |||||| |||||||||||||||||||| ||||| || |||| ||||||||||||||||| Sbjct: 651 ccgcagcagctggatcatgaacgagtatcgccttccccccgccgacaccgaccgctacca 710 Query: 786 caagaccgaaatctctctctgccgcgtctacaagcgctccggcatcgacgacggccacgg 845 |||||| |||||||| || |||||||| ||||||||| ||||||||||||||||||| || Sbjct: 711 caagactgaaatctcactatgccgcgtgtacaagcgcaccggcatcgacgacggccatgg 770 Query: 846 cca 848 ||| Sbjct: 771 cca 773 Score = 139 bits (70), Expect = 4e-29 Identities = 120/136 (88%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 1133 attgtaccagcagtacaccaagaacacgaacg---ccttcacctccacgtactcgctcct 1189 |||||||||||||||| |||||||||||| || ||||| |||||||||||||||| || Sbjct: 1107 attgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgct 1166 Query: 1190 caacctggtgaacgcggcctccatgggcagctccgccgcggcctttgacgagttgagcac 1249 |||||| || |||||||| |||||||||||||||||||| ||| |||| ||| ||||| | Sbjct: 1167 caacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctc 1226 Query: 1250 actggtgggccacggc 1265 ||||||||||||||| Sbjct: 1227 gctggtgggccacggc 1242 >ref|NM_001062103.1| Oryza sativa (japonica cultivar-group) Os05g0418800 (Os05g0418800) mRNA, complete cds Length = 1254 Score = 615 bits (310), Expect = e-172 Identities = 453/501 (90%), Gaps = 6/501 (1%) Strand = Plus / Plus Query: 354 cggcgacgctcacgaggacgacctggtgatgccggggttccggttccacccgacggagga 413 ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 cggcgactcgcacgagaacgacctggtgatgccggggttccggttccacccgacggagga 155 Query: 414 ggagctcatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagct 473 |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 156 ggagctgatcgagttctacctccggcggaaggtggagggccggcggttcaacgtcgagct 215 Query: 474 catcaccttcctcgacctctaccgctacgacccctgggacctcccagcaatggccgcgat 533 |||||||||||||||||||||||||| |||||| ||||| ||||| |||||||| | ||| Sbjct: 216 catcaccttcctcgacctctaccgcttcgacccatgggagctccccgcaatggcggtgat 275 Query: 534 tggggagaaggagtggttcttctatgtgccgagggaccgcaagtaccggaacggggaccg 593 ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| Sbjct: 276 aggggagaaggagtggttcttctacgtgccgcgggaccgcaagtaccggaacggcgaccg 335 Query: 594 gccgaaccgggtgaccgcgtcggggtactggaaggcgacgggtgccgaccggatgatccg 653 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 336 gccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccg 395 Query: 654 tgcggagaaccaccggccgatagggcttaagaagacgctcgtcttctactccggcaaggc 713 | |||||| ||| || || || || |||||||||||||||||||||||||||||||| Sbjct: 396 cggcgagaacagccgccccatcggcctcaagaagacgctcgtcttctactccggcaaggc 455 Query: 714 gcccaagggcgtccgcagaagctggatcatgaacgagtaccgcctc------ccgaccgc 767 ||||||||||||||||| ||||||||||||||||||||||||||| || |||| Sbjct: 456 ccccaagggcgtccgcagcagctggatcatgaacgagtaccgcctccccccgcccgccgc 515 Query: 768 agacaccgaccgctaccacaagaccgaaatctctctctgccgcgtctacaagcgctccgg 827 |||| |||| | || | ||||| | || ||||| |||||||||||||||||||||||||| Sbjct: 516 agacgccgatctcttctacaagtctgagatctcgctctgccgcgtctacaagcgctccgg 575 Query: 828 catcgacgacggccacggcca 848 ||||||||||||||||||||| Sbjct: 576 catcgacgacggccacggcca 596 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 341 bits (172), Expect = 6e-90 Identities = 247/272 (90%) Strand = Plus / Plus Query: 518 cagcaatggccgcgattggggagaaggagtggttcttctatgtgccgagggaccgcaagt 577 |||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| | |||| Sbjct: 38605451 cagcaatggcggcgataggggagaaggagtggttcttctacgtgcctcgggacaggaagt 38605510 Query: 578 accggaacggggaccggccgaaccgggtgaccgcgtcggggtactggaaggcgacgggtg 637 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 38605511 acaggaacggggaccggccgaaccgggtgacggcgtcggggtactggaaggcgacggggg 38605570 Query: 638 ccgaccggatgatccgtgcggagaaccaccggccgatagggcttaagaagacgctcgtct 697 |||||||||||||||| || |||||| |||| || || ||||| ||||||||||| |||| Sbjct: 38605571 ccgaccggatgatccgagccgagaacaaccgccccatcgggctcaagaagacgcttgtct 38605630 Query: 698 tctactccggcaaggcgcccaagggcgtccgcagaagctggatcatgaacgagtaccgcc 757 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 38605631 tctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtatcgcc 38605690 Query: 758 tcccgaccgcagacaccgaccgctaccacaag 789 | || |||| ||||||||||||||||||||| Sbjct: 38605691 ttccccccgccgacaccgaccgctaccacaag 38605722 Score = 262 bits (132), Expect = 4e-66 Identities = 147/152 (96%) Strand = Plus / Plus Query: 367 gaggacgacctggtgatgccggggttccggttccacccgacggaggaggagctcatcgag 426 ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct: 38605211 gaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgag 38605270 Query: 427 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38605271 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 38605330 Query: 487 gacctctaccgctacgacccctgggacctccc 518 |||||||||||||||||||||||||| ||||| Sbjct: 38605331 gacctctaccgctacgacccctgggagctccc 38605362 Score = 139 bits (70), Expect = 4e-29 Identities = 120/136 (88%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 1133 attgtaccagcagtacaccaagaacacgaacg---ccttcacctccacgtactcgctcct 1189 |||||||||||||||| |||||||||||| || ||||| |||||||||||||||| || Sbjct: 38606605 attgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgct 38606664 Query: 1190 caacctggtgaacgcggcctccatgggcagctccgccgcggcctttgacgagttgagcac 1249 |||||| || |||||||| |||||||||||||||||||| ||| |||| ||| ||||| | Sbjct: 38606665 caacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctc 38606724 Query: 1250 actggtgggccacggc 1265 ||||||||||||||| Sbjct: 38606725 gctggtgggccacggc 38606740 >dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 341 bits (172), Expect = 6e-90 Identities = 247/272 (90%) Strand = Plus / Plus Query: 518 cagcaatggccgcgattggggagaaggagtggttcttctatgtgccgagggaccgcaagt 577 |||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| | |||| Sbjct: 126132 cagcaatggcggcgataggggagaaggagtggttcttctacgtgcctcgggacaggaagt 126191 Query: 578 accggaacggggaccggccgaaccgggtgaccgcgtcggggtactggaaggcgacgggtg 637 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 126192 acaggaacggggaccggccgaaccgggtgacggcgtcggggtactggaaggcgacggggg 126251 Query: 638 ccgaccggatgatccgtgcggagaaccaccggccgatagggcttaagaagacgctcgtct 697 |||||||||||||||| || |||||| |||| || || ||||| ||||||||||| |||| Sbjct: 126252 ccgaccggatgatccgagccgagaacaaccgccccatcgggctcaagaagacgcttgtct 126311 Query: 698 tctactccggcaaggcgcccaagggcgtccgcagaagctggatcatgaacgagtaccgcc 757 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 126312 tctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtatcgcc 126371 Query: 758 tcccgaccgcagacaccgaccgctaccacaag 789 | || |||| ||||||||||||||||||||| Sbjct: 126372 ttccccccgccgacaccgaccgctaccacaag 126403 Score = 262 bits (132), Expect = 4e-66 Identities = 147/152 (96%) Strand = Plus / Plus Query: 367 gaggacgacctggtgatgccggggttccggttccacccgacggaggaggagctcatcgag 426 ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct: 125892 gaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgag 125951 Query: 427 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125952 ttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctc 126011 Query: 487 gacctctaccgctacgacccctgggacctccc 518 |||||||||||||||||||||||||| ||||| Sbjct: 126012 gacctctaccgctacgacccctgggagctccc 126043 Score = 139 bits (70), Expect = 4e-29 Identities = 120/136 (88%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 1133 attgtaccagcagtacaccaagaacacgaacg---ccttcacctccacgtactcgctcct 1189 |||||||||||||||| |||||||||||| || ||||| |||||||||||||||| || Sbjct: 127286 attgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgct 127345 Query: 1190 caacctggtgaacgcggcctccatgggcagctccgccgcggcctttgacgagttgagcac 1249 |||||| || |||||||| |||||||||||||||||||| ||| |||| ||| ||||| | Sbjct: 127346 caacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctc 127405 Query: 1250 actggtgggccacggc 1265 ||||||||||||||| Sbjct: 127406 gctggtgggccacggc 127421