BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf036f06 (1635 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048897.1| Oryza sativa (japonica cultivar-group) Os01g... 870 0.0 dbj|AK103702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 870 0.0 gb|AY109676.1| Zea mays CL11065_1 mRNA sequence 442 e-120 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 1e-53 dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic D... 220 1e-53 >ref|NM_001048897.1| Oryza sativa (japonica cultivar-group) Os01g0209400 (Os01g0209400) mRNA, complete cds Length = 1533 Score = 870 bits (439), Expect = 0.0 Identities = 589/639 (92%) Strand = Plus / Plus Query: 587 accagcagcgcaggaggaggaatggattcatcactcatggaaggagaagaacaaacgaga 646 |||||||||| ||||||||||||||| | ||| ||| |||||||| || | ||||||| Sbjct: 541 accagcagcgtcggaggaggaatggatacctcagtcaaggaaggaggaggatgaacgaga 600 Query: 647 gggcaaggcgtgcagacagggaggacagcattcgtcgaaccgtttatgtctctgatatcg 706 | ||||||| |||||||||||| ||||||||||| ||||| |||||||| |||||||| | Sbjct: 601 gagcaaggcatgcagacagggaagacagcattcggcgaactgtttatgtttctgatattg 660 Query: 707 atcatactgtgacagaggagagacttgctgatatctttgctacttgcgggcaagttgtcg 766 | ||||||||||| |||||||||||||||||||| ||||||| || |||||||| || | Sbjct: 661 accatactgtgacggaggagagacttgctgatatatttgctaactgtgggcaagtcgttg 720 Query: 767 attgcagaatctgtggtgatccccactctgttctgaggtttgcattcatcgagttctctg 826 | |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||| Sbjct: 721 actgcagaatctgtggtgatccacactcagttctaaggtttgcattcattgagtttgctg 780 Query: 827 atgaagagggcgcaagagctgcacttaatcttggtggcacaatgcttggtttttaccctg 886 ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 781 atgaagagggcgcaagaactgcacttaaccttggtggcacaatgcttggtttctaccctg 840 Query: 887 ttagagtcttaccttcaaagacagctatcttacctgtgaatccaaagtttcttcctagga 946 |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 841 ttagagtcttaccttcaaagacagctatattgcctgtgaatccaaagttccttcctagga 900 Query: 947 cggaggatgagaaggaaatggtcatacgaactatttattgtacaaatatagataagaagg 1006 |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 901 cggaggatgagaaggaaatggtcataagaactgtttattgtacaaacatagataagaagg 960 Query: 1007 ttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggtctctcgtttga 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 ttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggtctctcgtttga 1020 Query: 1067 gacttctaggcgacaatgtacattctacaaggattgcttttgttgagtttgtccatgctg 1126 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1021 gacttctaggggataatgtacattctacaaggattgcttttgttgagtttgtccatgccg 1080 Query: 1127 agggtgctatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcaggg 1186 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 agtgtgccatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcaggg 1140 Query: 1187 tgagcccgtctaagacagcggtaaagccacgtataaatc 1225 ||||||| ||||||||| |||| ||||||||| |||||| Sbjct: 1141 tgagcccttctaagacaccggtgaagccacgtttaaatc 1179 Score = 220 bits (111), Expect = 1e-53 Identities = 182/205 (88%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 373 gcgaaggaggcggagtgccagacgggcgtgcagaagctggtggacctgctgtccaagcta 432 |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 336 gcgaaggaggcggaataccagaagggcgtgcagaagctggtggacctgctgtccaagctg 395 Query: 433 aacccggccgccaaggagttcttcccctcctcggcggcg---tcgtcgctgtccaagaag 489 |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||| Sbjct: 396 aacccggctgccaaggagttcgtcccctcgtcggcggcggtctcgtcgccgtccaggaag 455 Query: 490 gcgctgtcagcggacgcgccagtgttcgactactactcgatcggaggagggagtgggggg 549 |||||||| ||||||||||| |||||||||||| ||||||||||||| ||| ||||| Sbjct: 456 gcgctgtcggcggacgcgccggtgttcgactacaactcgatcggaggctggaacgggggc 515 Query: 550 agcaaggactccggtgccgacgcct 574 ||||||| ||||| |||||||||| Sbjct: 516 ggcaaggaatccggcgccgacgcct 540 >dbj|AK103702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136L22, full insert sequence Length = 1542 Score = 870 bits (439), Expect = 0.0 Identities = 589/639 (92%) Strand = Plus / Plus Query: 587 accagcagcgcaggaggaggaatggattcatcactcatggaaggagaagaacaaacgaga 646 |||||||||| ||||||||||||||| | ||| ||| |||||||| || | ||||||| Sbjct: 550 accagcagcgtcggaggaggaatggatacctcagtcaaggaaggaggaggatgaacgaga 609 Query: 647 gggcaaggcgtgcagacagggaggacagcattcgtcgaaccgtttatgtctctgatatcg 706 | ||||||| |||||||||||| ||||||||||| ||||| |||||||| |||||||| | Sbjct: 610 gagcaaggcatgcagacagggaagacagcattcggcgaactgtttatgtttctgatattg 669 Query: 707 atcatactgtgacagaggagagacttgctgatatctttgctacttgcgggcaagttgtcg 766 | ||||||||||| |||||||||||||||||||| ||||||| || |||||||| || | Sbjct: 670 accatactgtgacggaggagagacttgctgatatatttgctaactgtgggcaagtcgttg 729 Query: 767 attgcagaatctgtggtgatccccactctgttctgaggtttgcattcatcgagttctctg 826 | |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||| Sbjct: 730 actgcagaatctgtggtgatccacactcagttctaaggtttgcattcattgagtttgctg 789 Query: 827 atgaagagggcgcaagagctgcacttaatcttggtggcacaatgcttggtttttaccctg 886 ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 790 atgaagagggcgcaagaactgcacttaaccttggtggcacaatgcttggtttctaccctg 849 Query: 887 ttagagtcttaccttcaaagacagctatcttacctgtgaatccaaagtttcttcctagga 946 |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 850 ttagagtcttaccttcaaagacagctatattgcctgtgaatccaaagttccttcctagga 909 Query: 947 cggaggatgagaaggaaatggtcatacgaactatttattgtacaaatatagataagaagg 1006 |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 910 cggaggatgagaaggaaatggtcataagaactgtttattgtacaaacatagataagaagg 969 Query: 1007 ttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggtctctcgtttga 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 ttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggtctctcgtttga 1029 Query: 1067 gacttctaggcgacaatgtacattctacaaggattgcttttgttgagtttgtccatgctg 1126 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1030 gacttctaggggataatgtacattctacaaggattgcttttgttgagtttgtccatgccg 1089 Query: 1127 agggtgctatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcaggg 1186 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 agtgtgccatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcaggg 1149 Query: 1187 tgagcccgtctaagacagcggtaaagccacgtataaatc 1225 ||||||| ||||||||| |||| ||||||||| |||||| Sbjct: 1150 tgagcccttctaagacaccggtgaagccacgtttaaatc 1188 Score = 220 bits (111), Expect = 1e-53 Identities = 182/205 (88%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 373 gcgaaggaggcggagtgccagacgggcgtgcagaagctggtggacctgctgtccaagcta 432 |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 345 gcgaaggaggcggaataccagaagggcgtgcagaagctggtggacctgctgtccaagctg 404 Query: 433 aacccggccgccaaggagttcttcccctcctcggcggcg---tcgtcgctgtccaagaag 489 |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||| Sbjct: 405 aacccggctgccaaggagttcgtcccctcgtcggcggcggtctcgtcgccgtccaggaag 464 Query: 490 gcgctgtcagcggacgcgccagtgttcgactactactcgatcggaggagggagtgggggg 549 |||||||| ||||||||||| |||||||||||| ||||||||||||| ||| ||||| Sbjct: 465 gcgctgtcggcggacgcgccggtgttcgactacaactcgatcggaggctggaacgggggc 524 Query: 550 agcaaggactccggtgccgacgcct 574 ||||||| ||||| |||||||||| Sbjct: 525 ggcaaggaatccggcgccgacgcct 549 >gb|AY109676.1| Zea mays CL11065_1 mRNA sequence Length = 1019 Score = 442 bits (223), Expect = e-120 Identities = 304/331 (91%) Strand = Plus / Minus Query: 872 ttggtttttaccctgttagagtcttaccttcaaagacagctatcttacctgtgaatccaa 931 ||||||| |||||||||||||| || || ||||||||||||||||||||||| ||||||| Sbjct: 696 ttggtttctaccctgttagagttttgccgtcaaagacagctatcttacctgttaatccaa 637 Query: 932 agtttcttcctaggacggaggatgagaaggaaatggtcatacgaactatttattgtacaa 991 |||||||||| |||||||| || ||||||||||||||||| |||||| | |||||||||| Sbjct: 636 agtttcttcccaggacggatgacgagaaggaaatggtcatgcgaactgtctattgtacaa 577 Query: 992 atatagataagaaggttactcaattagatgtaaagaatttctttgaagaactttgtggtg 1051 | |||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 576 acatagataagatggttactcagttagatgtaaagaaattctttgaagaactttgcggtg 517 Query: 1052 aggtctctcgtttgagacttctaggcgacaatgtacattctacaaggattgcttttgttg 1111 |||||||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 516 aggtctctcggttgaggcttctaggggataatgtacattccacaaggattgcttttgttg 457 Query: 1112 agtttgtccatgctgagggtgctatcatggctctgaattgcagtgggatgattttgggta 1171 | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | Sbjct: 456 aatttgtccatgctgagggtgccatcatggctctgaattgcagcgggatgattttgggaa 397 Query: 1172 cactgcctgtcagggtgagcccgtctaagac 1202 |||||||||||||||||||||| || ||||| Sbjct: 396 cactgcctgtcagggtgagcccttccaagac 366 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 220 bits (111), Expect = 1e-53 Identities = 182/205 (88%), Gaps = 3/205 (1%) Strand = Plus / Minus Query: 373 gcgaaggaggcggagtgccagacgggcgtgcagaagctggtggacctgctgtccaagcta 432 |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5938181 gcgaaggaggcggaataccagaagggcgtgcagaagctggtggacctgctgtccaagctg 5938122 Query: 433 aacccggccgccaaggagttcttcccctcctcggcggcg---tcgtcgctgtccaagaag 489 |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||| Sbjct: 5938121 aacccggctgccaaggagttcgtcccctcgtcggcggcggtctcgtcgccgtccaggaag 5938062 Query: 490 gcgctgtcagcggacgcgccagtgttcgactactactcgatcggaggagggagtgggggg 549 |||||||| ||||||||||| |||||||||||| ||||||||||||| ||| ||||| Sbjct: 5938061 gcgctgtcggcggacgcgccggtgttcgactacaactcgatcggaggctggaacgggggc 5938002 Query: 550 agcaaggactccggtgccgacgcct 574 ||||||| ||||| |||||||||| Sbjct: 5938001 ggcaaggaatccggcgccgacgcct 5937977 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Minus Query: 830 aagagggcgcaagagctgcacttaatcttggtggcacaatgcttggtttttaccctgtta 889 |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 5935999 aagagggcgcaagaactgcacttaaccttggtggcacaatgcttggtttctaccctgtta 5935940 Query: 890 gagtcttaccttcaaagacagctatcttacctgtgaatccaaagtttcttcctagg 945 ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 5935939 gagtcttaccttcaaagacagctatattgcctgtgaatccaaagttccttcctagg 5935884 Score = 127 bits (64), Expect = 2e-25 Identities = 70/72 (97%) Strand = Plus / Minus Query: 1052 aggtctctcgtttgagacttctaggcgacaatgtacattctacaaggattgcttttgttg 1111 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 5934355 aggtctctcgtttgagacttctaggggataatgtacattctacaaggattgcttttgttg 5934296 Query: 1112 agtttgtccatg 1123 |||||||||||| Sbjct: 5934295 agtttgtccatg 5934284 Score = 109 bits (55), Expect = 4e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 600 gaggaggaatggattcatcactcatggaaggagaagaacaaacgagagggcaaggcgtgc 659 |||||||||||||| | ||| ||| |||||||| || | |||||||| ||||||| ||| Sbjct: 5937134 gaggaggaatggatacctcagtcaaggaaggaggaggatgaacgagagagcaaggcatgc 5937075 Query: 660 agacagggaggacagcattcgtcgaaccgtttatgtctctgatatcgatcatactgtga 718 ||||||||| ||||||||||| ||||| |||||||| |||||||| || |||||||||| Sbjct: 5937074 agacagggaagacagcattcggcgaactgtttatgtttctgatattgaccatactgtga 5937016 Score = 103 bits (52), Expect = 2e-18 Identities = 55/56 (98%) Strand = Plus / Minus Query: 1130 gtgctatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcagg 1185 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5934118 gtgccatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcagg 5934063 Score = 103 bits (52), Expect = 2e-18 Identities = 52/52 (100%) Strand = Plus / Minus Query: 1004 aggttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggt 1055 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5935585 aggttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggt 5935534 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 945 gacggaggatgagaaggaaatggtcatacgaactatttattgtacaaatatagataagaa 1004 |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 5935781 gacggaggatgagaaggaaatggtcataagaactgtttattgtacaaacatagataagaa 5935722 Query: 1005 ggt 1007 ||| Sbjct: 5935721 ggt 5935719 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 769 tgcagaatctgtggtgatccccactctgttctgaggtttgcattcatcgagttctctgat 828 |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 5936145 tgcagaatctgtggtgatccacactcagttctaaggtttgcattcattgagtttgctgat 5936086 Query: 829 gaag 832 |||| Sbjct: 5936085 gaag 5936082 >dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 220 bits (111), Expect = 1e-53 Identities = 182/205 (88%), Gaps = 3/205 (1%) Strand = Plus / Minus Query: 373 gcgaaggaggcggagtgccagacgggcgtgcagaagctggtggacctgctgtccaagcta 432 |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141922 gcgaaggaggcggaataccagaagggcgtgcagaagctggtggacctgctgtccaagctg 141863 Query: 433 aacccggccgccaaggagttcttcccctcctcggcggcg---tcgtcgctgtccaagaag 489 |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||| Sbjct: 141862 aacccggctgccaaggagttcgtcccctcgtcggcggcggtctcgtcgccgtccaggaag 141803 Query: 490 gcgctgtcagcggacgcgccagtgttcgactactactcgatcggaggagggagtgggggg 549 |||||||| ||||||||||| |||||||||||| ||||||||||||| ||| ||||| Sbjct: 141802 gcgctgtcggcggacgcgccggtgttcgactacaactcgatcggaggctggaacgggggc 141743 Query: 550 agcaaggactccggtgccgacgcct 574 ||||||| ||||| |||||||||| Sbjct: 141742 ggcaaggaatccggcgccgacgcct 141718 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Minus Query: 830 aagagggcgcaagagctgcacttaatcttggtggcacaatgcttggtttttaccctgtta 889 |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 139740 aagagggcgcaagaactgcacttaaccttggtggcacaatgcttggtttctaccctgtta 139681 Query: 890 gagtcttaccttcaaagacagctatcttacctgtgaatccaaagtttcttcctagg 945 ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 139680 gagtcttaccttcaaagacagctatattgcctgtgaatccaaagttccttcctagg 139625 Score = 127 bits (64), Expect = 2e-25 Identities = 70/72 (97%) Strand = Plus / Minus Query: 1052 aggtctctcgtttgagacttctaggcgacaatgtacattctacaaggattgcttttgttg 1111 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 138096 aggtctctcgtttgagacttctaggggataatgtacattctacaaggattgcttttgttg 138037 Query: 1112 agtttgtccatg 1123 |||||||||||| Sbjct: 138036 agtttgtccatg 138025 Score = 109 bits (55), Expect = 4e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 600 gaggaggaatggattcatcactcatggaaggagaagaacaaacgagagggcaaggcgtgc 659 |||||||||||||| | ||| ||| |||||||| || | |||||||| ||||||| ||| Sbjct: 140875 gaggaggaatggatacctcagtcaaggaaggaggaggatgaacgagagagcaaggcatgc 140816 Query: 660 agacagggaggacagcattcgtcgaaccgtttatgtctctgatatcgatcatactgtga 718 ||||||||| ||||||||||| ||||| |||||||| |||||||| || |||||||||| Sbjct: 140815 agacagggaagacagcattcggcgaactgtttatgtttctgatattgaccatactgtga 140757 Score = 103 bits (52), Expect = 2e-18 Identities = 55/56 (98%) Strand = Plus / Minus Query: 1130 gtgctatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcagg 1185 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137859 gtgccatcatggctctgaattgcagtgggatgattttgggtacactgcctgtcagg 137804 Score = 103 bits (52), Expect = 2e-18 Identities = 52/52 (100%) Strand = Plus / Minus Query: 1004 aggttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggt 1055 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139326 aggttactcaattagatgtaaagaatttctttgaagaactttgtggtgaggt 139275 Score = 101 bits (51), Expect = 9e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 945 gacggaggatgagaaggaaatggtcatacgaactatttattgtacaaatatagataagaa 1004 |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139522 gacggaggatgagaaggaaatggtcataagaactgtttattgtacaaacatagataagaa 139463 Query: 1005 ggt 1007 ||| Sbjct: 139462 ggt 139460 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 769 tgcagaatctgtggtgatccccactctgttctgaggtttgcattcatcgagttctctgat 828 |||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 139886 tgcagaatctgtggtgatccacactcagttctaaggtttgcattcattgagtttgctgat 139827 Query: 829 gaag 832 |||| Sbjct: 139826 gaag 139823