BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf036e18 (1473 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome... 511 e-141 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 511 e-141 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-20 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-20 dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-20 >gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 511 bits (258), Expect = e-141 Identities = 390/434 (89%) Strand = Plus / Minus Query: 503 tgagcgcggaggagaagttcgcggcgggggaagtggtggcggggctgcggacggtggaga 562 ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 86948 tgagcgcggaggagaagttcgcggcgggggaggtggtggcggcgctgcggactgtggaga 86889 Query: 563 gggagatggaggccgcggcgagggcggtgccggcgggggtcgtggccggggtggtcgcgg 622 ||||||||||||| ||||||||||||||||||| | |||||||||||||| || |||| Sbjct: 86888 gggagatggaggcggcggcgagggcggtgccggtcgccgtcgtggccggggtcgtggcgg 86829 Query: 623 cggtgcgggagccggcgacggcgaggctggcggcgaaggttctgcttgttgtgctgctgg 682 ||||||||||||||| |||||||||||| ||||||||||| ||| | || |||||||||| Sbjct: 86828 cggtgcgggagccggagacggcgaggctcgcggcgaaggtgctgttggtcgtgctgctgg 86769 Query: 683 aggaggggaacagagagacggcggtcgagttgggcgcggcgtccgcggccgtggaggcag 742 | || |||||||| ||| |||| |||||| ||||||||||| |||||||||||||| | Sbjct: 86768 aagaagggaacagggaggcggccgtcgaggccggcgcggcgtcggcggccgtggaggcgg 86709 Query: 743 tggcggcgtcggggccggcgggggccacggcggagcgcgcgctggcagcgctggagctgc 802 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 86708 tggcggcgtccgggccggcgggggccacggcggagcgcgcgctggcggcgctggagctcc 86649 Query: 803 tgtgcacggccgcgggcggcgccgtggctgtgcggagggagccattggcggcgccggtgc 862 | ||||| ||||| |||||||||| ||| |||||||||||||| |||| ||||| |||| Sbjct: 86648 tctgcaccgccgccggcggcgccgcggccgtgcggagggagcccctggccgcgcccgtgc 86589 Query: 863 tggcgcgggccgtggaggggatggccggccgcgggcgggagtgcgccgtcggcgtcctgg 922 ||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||||||| Sbjct: 86588 tggcgcgcgccgtggagggcatggccggccgcggacgcgagtgcgccatcggcgtcctgg 86529 Query: 923 ccgccatctacggc 936 | |||||||||||| Sbjct: 86528 cggccatctacggc 86515 Score = 222 bits (112), Expect = 3e-54 Identities = 142/152 (93%) Strand = Plus / Minus Query: 967 ccgccgccgccggaagtcgtcaaggccgtcgtagcagcgatgcagggggagtgcagcgcg 1026 |||||||||||||| || || ||||| || || || |||||||||||||||||||||||| Sbjct: 86478 ccgccgccgccggaggtggtgaaggcggtggtggcggcgatgcagggggagtgcagcgcg 86419 Query: 1027 cggggacggcgcaagggcgcgcagctgctgcgcgcgctgcaggagggaggccgcctcggg 1086 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86418 cgggggcggcgcaagggcgcgcagctgctgcgcgcgctgcaggagggcggccgcctcggc 86359 Query: 1087 ctcgcgtgggacggcgtcggcgagccctgaca 1118 |||||||||||||||||||||||||||||||| Sbjct: 86358 ctcgcgtgggacggcgtcggcgagccctgaca 86327 Score = 151 bits (76), Expect = 1e-32 Identities = 121/136 (88%) Strand = Plus / Minus Query: 352 gcggccgtgcagacgaatgtcggcccgtcgtcgtcttcctcgtcctcgtcgtcctcggcg 411 ||||| ||||||| || ||||| ||||||||||| || ||||| || ||||| |||||| Sbjct: 87117 gcggcggtgcagaggagcgtcgggccgtcgtcgtcctcgtcgtcgtcctcgtcttcggcg 87058 Query: 412 tcgcagagtttcacgcagtggaggctgccggtgcatcacccaccgcaggcgtcggcgtcg 471 |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||| Sbjct: 87057 tcgcagagcttcacgcagtggaggctgccggtgcatcacccgccgcaagcgtcggggtcg 86998 Query: 472 gcggggggaggaggag 487 ||||| |||||||||| Sbjct: 86997 gcgggaggaggaggag 86982 Score = 139 bits (70), Expect = 4e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 142 ggcgggggcagcgcggcgaagctcaaggcgtcgccgcgggcgctcttctcctgcggcatt 201 ||||| ||| ||||||||| ||||||| |||| || ||||||||||||| ||||| || Sbjct: 87381 ggcggcggcggcgcggcgaggctcaagccgtccccaagggcgctcttctcgtgcgggatc 87322 Query: 202 ttcagcacctgcacgcacccggcgctcagccccaccgccactcccaacaacaatgtggtg 261 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 87321 ttcagcacctgcacgcacccggcgctcagcccgacggccacgcccaacaacaatgtcgtg 87262 Query: 262 gcgggg 267 |||||| Sbjct: 87261 gcgggg 87256 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 511 bits (258), Expect = e-141 Identities = 390/434 (89%) Strand = Plus / Minus Query: 503 tgagcgcggaggagaagttcgcggcgggggaagtggtggcggggctgcggacggtggaga 562 ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 27619672 tgagcgcggaggagaagttcgcggcgggggaggtggtggcggcgctgcggactgtggaga 27619613 Query: 563 gggagatggaggccgcggcgagggcggtgccggcgggggtcgtggccggggtggtcgcgg 622 ||||||||||||| ||||||||||||||||||| | |||||||||||||| || |||| Sbjct: 27619612 gggagatggaggcggcggcgagggcggtgccggtcgccgtcgtggccggggtcgtggcgg 27619553 Query: 623 cggtgcgggagccggcgacggcgaggctggcggcgaaggttctgcttgttgtgctgctgg 682 ||||||||||||||| |||||||||||| ||||||||||| ||| | || |||||||||| Sbjct: 27619552 cggtgcgggagccggagacggcgaggctcgcggcgaaggtgctgttggtcgtgctgctgg 27619493 Query: 683 aggaggggaacagagagacggcggtcgagttgggcgcggcgtccgcggccgtggaggcag 742 | || |||||||| ||| |||| |||||| ||||||||||| |||||||||||||| | Sbjct: 27619492 aagaagggaacagggaggcggccgtcgaggccggcgcggcgtcggcggccgtggaggcgg 27619433 Query: 743 tggcggcgtcggggccggcgggggccacggcggagcgcgcgctggcagcgctggagctgc 802 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 27619432 tggcggcgtccgggccggcgggggccacggcggagcgcgcgctggcggcgctggagctcc 27619373 Query: 803 tgtgcacggccgcgggcggcgccgtggctgtgcggagggagccattggcggcgccggtgc 862 | ||||| ||||| |||||||||| ||| |||||||||||||| |||| ||||| |||| Sbjct: 27619372 tctgcaccgccgccggcggcgccgcggccgtgcggagggagcccctggccgcgcccgtgc 27619313 Query: 863 tggcgcgggccgtggaggggatggccggccgcgggcgggagtgcgccgtcggcgtcctgg 922 ||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||||||| Sbjct: 27619312 tggcgcgcgccgtggagggcatggccggccgcggacgcgagtgcgccatcggcgtcctgg 27619253 Query: 923 ccgccatctacggc 936 | |||||||||||| Sbjct: 27619252 cggccatctacggc 27619239 Score = 222 bits (112), Expect = 3e-54 Identities = 142/152 (93%) Strand = Plus / Minus Query: 967 ccgccgccgccggaagtcgtcaaggccgtcgtagcagcgatgcagggggagtgcagcgcg 1026 |||||||||||||| || || ||||| || || || |||||||||||||||||||||||| Sbjct: 27619202 ccgccgccgccggaggtggtgaaggcggtggtggcggcgatgcagggggagtgcagcgcg 27619143 Query: 1027 cggggacggcgcaagggcgcgcagctgctgcgcgcgctgcaggagggaggccgcctcggg 1086 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27619142 cgggggcggcgcaagggcgcgcagctgctgcgcgcgctgcaggagggcggccgcctcggc 27619083 Query: 1087 ctcgcgtgggacggcgtcggcgagccctgaca 1118 |||||||||||||||||||||||||||||||| Sbjct: 27619082 ctcgcgtgggacggcgtcggcgagccctgaca 27619051 Score = 151 bits (76), Expect = 1e-32 Identities = 121/136 (88%) Strand = Plus / Minus Query: 352 gcggccgtgcagacgaatgtcggcccgtcgtcgtcttcctcgtcctcgtcgtcctcggcg 411 ||||| ||||||| || ||||| ||||||||||| || ||||| || ||||| |||||| Sbjct: 27619841 gcggcggtgcagaggagcgtcgggccgtcgtcgtcctcgtcgtcgtcctcgtcttcggcg 27619782 Query: 412 tcgcagagtttcacgcagtggaggctgccggtgcatcacccaccgcaggcgtcggcgtcg 471 |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||| Sbjct: 27619781 tcgcagagcttcacgcagtggaggctgccggtgcatcacccgccgcaagcgtcggggtcg 27619722 Query: 472 gcggggggaggaggag 487 ||||| |||||||||| Sbjct: 27619721 gcgggaggaggaggag 27619706 Score = 139 bits (70), Expect = 4e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 142 ggcgggggcagcgcggcgaagctcaaggcgtcgccgcgggcgctcttctcctgcggcatt 201 ||||| ||| ||||||||| ||||||| |||| || ||||||||||||| ||||| || Sbjct: 27620105 ggcggcggcggcgcggcgaggctcaagccgtccccaagggcgctcttctcgtgcgggatc 27620046 Query: 202 ttcagcacctgcacgcacccggcgctcagccccaccgccactcccaacaacaatgtggtg 261 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||| Sbjct: 27620045 ttcagcacctgcacgcacccggcgctcagcccgacggccacgcccaacaacaatgtcgtg 27619986 Query: 262 gcgggg 267 |||||| Sbjct: 27619985 gcgggg 27619980 Score = 91.7 bits (46), Expect = 8e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 152 gcgcggcgaagctcaaggcgtcgccgcgggcgctcttctcctgcggcattttcagcacct 211 ||||||| | ||||||| |||||| ||||||||||||||| ||||| || |||||||||| Sbjct: 16600556 gcgcggcaaggctcaagccgtcgctgcgggcgctcttctcatgcgggatcttcagcacct 16600615 Query: 212 gcacgcacccggcgctcagccccaccgccactcccaacaacaatgt 257 | || ||||| || |||||||| || || || |||||||||||||| Sbjct: 16600616 gaacacacccagcactcagcccgacggcgacgcccaacaacaatgt 16600661 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 109 bits (55), Expect = 3e-20 Identities = 151/183 (82%) Strand = Plus / Plus Query: 513 ggagaagttcgcggcgggggaagtggtggcggggctgcggacggtggagagggagatgga 572 |||||||||| |||||||||| |||||||||| || ||||| ||||||||||||||||| Sbjct: 21029628 ggagaagttctcggcgggggaggtggtggcggcgcaacggacagtggagagggagatgga 21029687 Query: 573 ggccgcggcgagggcggtgccggcgggggtcgtggccggggtggtcgcggcggtgcggga 632 ||| || ||||||||| | ||| | |||||||| ||||| || ||||| |||| ||| Sbjct: 21029688 ggcggcagcgagggcgataccgatcgttgtcgtggctggggttgtggcggctgtgccgga 21029747 Query: 633 gccggcgacggcgaggctggcggcgaaggttctgcttgttgtgctgctggaggaggggaa 692 |||||| || |||| || ||||||||| | |||| || |||||||||| ||| ||||| Sbjct: 21029748 gccggcaacaacgagacttgcggcgaagttgttgctggtcgtgctgctggtggaagggaa 21029807 Query: 693 cag 695 ||| Sbjct: 21029808 cag 21029810 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 109 bits (55), Expect = 3e-20 Identities = 67/71 (94%) Strand = Plus / Minus Query: 503 tgagcgcggaggagaagttcgcggcgggggaagtggtggcggggctgcggacggtggaga 562 ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 23286962 tgagcgcggaggagaagttcgcggcgggggaggtggtggcggcgctgcggatggtggaga 23286903 Query: 563 gggagatggag 573 ||| ||||||| Sbjct: 23286902 gggggatggag 23286892 Score = 83.8 bits (42), Expect = 2e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 152 gcgcggcgaagctcaaggcgtcgccgcgggcgctcttctcctgcggcattttcagcacct 211 ||||||||| ||||||| |||||| ||||||||||||||| ||||| || |||||| ||| Sbjct: 350825 gcgcggcgaggctcaagccgtcgctgcgggcgctcttctcatgcgggatcttcagcgcct 350766 Query: 212 gcacgcacccggcgctcagccccaccgccactcccaacaacaatgt 257 ||||||| | || |||||||| || | || |||||||||||||| Sbjct: 350765 gcacgcatctagcactcagcccgacggtgacgcccaacaacaatgt 350720 >dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0457B11 Length = 144015 Score = 109 bits (55), Expect = 3e-20 Identities = 67/71 (94%) Strand = Plus / Minus Query: 503 tgagcgcggaggagaagttcgcggcgggggaagtggtggcggggctgcggacggtggaga 562 ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 5935 tgagcgcggaggagaagttcgcggcgggggaggtggtggcggcgctgcggatggtggaga 5876 Query: 563 gggagatggag 573 ||| ||||||| Sbjct: 5875 gggggatggag 5865