BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf035m18 (1146 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 369 2e-98 emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 369 2e-98 emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 369 2e-98 ref|NM_001072882.1| Oryza sativa (japonica cultivar-group) Os12g... 196 1e-46 gb|AY105123.1| Zea mays PCO091259 mRNA sequence 133 2e-27 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 369 bits (186), Expect = 2e-98 Identities = 463/546 (84%), Gaps = 17/546 (3%) Strand = Plus / Plus Query: 446 cagttcaacaggagatgtttgagcgggaaataggccgtcttagatcattgttccagcagc 505 |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| | Sbjct: 4857928 cagttcaacaggagatgtttgaacgggaaattggccgtctcagatcattgtttcagcaac 4857987 Query: 506 agca---gcagcagcagataccgcagcagcaagctcctgcccacagccgtagtaacagca 562 |||| ||||||||| ||||| |||||||| | |||| ||||||| ||||||||||||| Sbjct: 4857988 agcaacagcagcagcacataccacagcagcagggtcctacccacagtcgtagtaacagca 4858047 Query: 563 gagacatcgatccacaattcgcaaacatgtctctgaaaaacaatgattccaactcagggc 622 ||||| ||||| | ||||| |||||||||||||| ||| || ||| |||||||||||| Sbjct: 4858048 gagacctcgattcgcaatttgcaaacatgtctctaaaacacggcgatcccaactcagggc 4858107 Query: 623 gtgatgctgtccctggccttcgcatttaatattctttttttgtagcttttgattctgcga 682 |||||||||| || |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 4858108 gtgatgctgttccaggccttcgcatttaggattcttttcccccagcttatgattctgtga 4858167 Query: 683 gtttcacatagctt-gctaccc----cctgccactattttgtggtcattagttggcatca 737 |||||||||||||| |||| || | | |||||| |||||||||||||||| |||||| Sbjct: 4858168 gtttcacatagcttcgctatccctgtcataccacta-tttgtggtcattagtt-gcatca 4858225 Query: 738 agaggggagcagcagcggtgaatctggaatcacatcccatggtgaataaagccggaaagg 797 |||||||||||| || |||| |||||||||||||| ||| |||||| ||| ||||||| Sbjct: 4858226 ggaggggagcagcgacgatgaacctggaatcacatccaatgatgaatagagctggaaagg 4858285 Query: 798 -gtgctaactatggatcagttctttatttctttcggaatgtgcacctgacggtcatcctc 856 | |||||||||||| || ||||||| ||| ||||||||||||||||||||||||| Sbjct: 4858286 cttagtaactatggatccaatccttatttcattctgaatgtgcacctgacggtcatcctc 4858345 Query: 857 agctcatatccattg--ttgatactcgaccagtcggaggtgtttagggtctattcgcagg 914 | ||||||||||||| ||||| || |||||||||||||||||||||||||||| |||| Sbjct: 4858346 atctcatatccattgttttgatgctagaccagtcggaggtgtttagggtctatttgcagc 4858405 Query: 915 ttgatgcttttcttgtatccttgtatcagtttgaacgctaaggttctaattcattcctta 974 |||| |||||||||| |||| | |||||||||| ||||||||||||||||| || Sbjct: 4858406 ttgaagcttttcttgcttcctag--tcagtttgaa--acaaggttctaattcattcattc 4858461 Query: 975 agtctt 980 |||||| Sbjct: 4858462 agtctt 4858467 >emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 369 bits (186), Expect = 2e-98 Identities = 463/546 (84%), Gaps = 17/546 (3%) Strand = Plus / Minus Query: 446 cagttcaacaggagatgtttgagcgggaaataggccgtcttagatcattgttccagcagc 505 |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| | Sbjct: 80494 cagttcaacaggagatgtttgaacgggaaattggccgtctcagatcattgtttcagcaac 80435 Query: 506 agcagcagcagcag---ataccgcagcagcaagctcctgcccacagccgtagtaacagca 562 |||| ||||||||| ||||| |||||||| | |||| ||||||| ||||||||||||| Sbjct: 80434 agcaacagcagcagcacataccacagcagcagggtcctacccacagtcgtagtaacagca 80375 Query: 563 gagacatcgatccacaattcgcaaacatgtctctgaaaaacaatgattccaactcagggc 622 ||||| ||||| | ||||| |||||||||||||| ||| || ||| |||||||||||| Sbjct: 80374 gagacctcgattcgcaatttgcaaacatgtctctaaaacacggcgatcccaactcagggc 80315 Query: 623 gtgatgctgtccctggccttcgcatttaatattctttttttgtagcttttgattctgcga 682 |||||||||| || |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 80314 gtgatgctgttccaggccttcgcatttaggattcttttcccccagcttatgattctgtga 80255 Query: 683 gtttcacatagctt-gctaccc----cctgccactattttgtggtcattagttggcatca 737 |||||||||||||| |||| || | | |||||| |||||||||||||||| |||||| Sbjct: 80254 gtttcacatagcttcgctatccctgtcataccacta-tttgtggtcattagtt-gcatca 80197 Query: 738 agaggggagcagcagcggtgaatctggaatcacatcccatggtgaataaagccggaaagg 797 |||||||||||| || |||| |||||||||||||| ||| |||||| ||| ||||||| Sbjct: 80196 ggaggggagcagcgacgatgaacctggaatcacatccaatgatgaatagagctggaaagg 80137 Query: 798 -gtgctaactatggatcagttctttatttctttcggaatgtgcacctgacggtcatcctc 856 | |||||||||||| || ||||||| ||| ||||||||||||||||||||||||| Sbjct: 80136 cttagtaactatggatccaatccttatttcattctgaatgtgcacctgacggtcatcctc 80077 Query: 857 agctcatatccattg--ttgatactcgaccagtcggaggtgtttagggtctattcgcagg 914 | ||||||||||||| ||||| || |||||||||||||||||||||||||||| |||| Sbjct: 80076 atctcatatccattgttttgatgctagaccagtcggaggtgtttagggtctatttgcagc 80017 Query: 915 ttgatgcttttcttgtatccttgtatcagtttgaacgctaaggttctaattcattcctta 974 |||| |||||||||| |||| | |||||||||| ||||||||||||||||| || Sbjct: 80016 ttgaagcttttcttgcttcctag--tcagtttgaa--acaaggttctaattcattcattc 79961 Query: 975 agtctt 980 |||||| Sbjct: 79960 agtctt 79955 >emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 369 bits (186), Expect = 2e-98 Identities = 463/546 (84%), Gaps = 17/546 (3%) Strand = Plus / Minus Query: 446 cagttcaacaggagatgtttgagcgggaaataggccgtcttagatcattgttccagcagc 505 |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| | Sbjct: 102031 cagttcaacaggagatgtttgaacgggaaattggccgtctcagatcattgtttcagcaac 101972 Query: 506 agcagcagcagcag---ataccgcagcagcaagctcctgcccacagccgtagtaacagca 562 |||| ||||||||| ||||| |||||||| | |||| ||||||| ||||||||||||| Sbjct: 101971 agcaacagcagcagcacataccacagcagcagggtcctacccacagtcgtagtaacagca 101912 Query: 563 gagacatcgatccacaattcgcaaacatgtctctgaaaaacaatgattccaactcagggc 622 ||||| ||||| | ||||| |||||||||||||| ||| || ||| |||||||||||| Sbjct: 101911 gagacctcgattcgcaatttgcaaacatgtctctaaaacacggcgatcccaactcagggc 101852 Query: 623 gtgatgctgtccctggccttcgcatttaatattctttttttgtagcttttgattctgcga 682 |||||||||| || |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 101851 gtgatgctgttccaggccttcgcatttaggattcttttcccccagcttatgattctgtga 101792 Query: 683 gtttcacatagctt-gctaccc----cctgccactattttgtggtcattagttggcatca 737 |||||||||||||| |||| || | | |||||| |||||||||||||||| |||||| Sbjct: 101791 gtttcacatagcttcgctatccctgtcataccacta-tttgtggtcattagtt-gcatca 101734 Query: 738 agaggggagcagcagcggtgaatctggaatcacatcccatggtgaataaagccggaaagg 797 |||||||||||| || |||| |||||||||||||| ||| |||||| ||| ||||||| Sbjct: 101733 ggaggggagcagcgacgatgaacctggaatcacatccaatgatgaatagagctggaaagg 101674 Query: 798 -gtgctaactatggatcagttctttatttctttcggaatgtgcacctgacggtcatcctc 856 | |||||||||||| || ||||||| ||| ||||||||||||||||||||||||| Sbjct: 101673 cttagtaactatggatccaatccttatttcattctgaatgtgcacctgacggtcatcctc 101614 Query: 857 agctcatatccattg--ttgatactcgaccagtcggaggtgtttagggtctattcgcagg 914 | ||||||||||||| ||||| || |||||||||||||||||||||||||||| |||| Sbjct: 101613 atctcatatccattgttttgatgctagaccagtcggaggtgtttagggtctatttgcagc 101554 Query: 915 ttgatgcttttcttgtatccttgtatcagtttgaacgctaaggttctaattcattcctta 974 |||| |||||||||| |||| | |||||||||| ||||||||||||||||| || Sbjct: 101553 ttgaagcttttcttgcttcctag--tcagtttgaa--acaaggttctaattcattcattc 101498 Query: 975 agtctt 980 |||||| Sbjct: 101497 agtctt 101492 >ref|NM_001072882.1| Oryza sativa (japonica cultivar-group) Os12g0194600 (Os12g0194600) mRNA, complete cds Length = 453 Score = 196 bits (99), Expect = 1e-46 Identities = 179/205 (87%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 449 ttcaacaggagatgtttgagcgggaaataggccgtcttagatcattgttccagcagcagc 508 ||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 248 ttcaacaggagatgtttgaacgggaaattggccgtctcagatcattgtttcagcaacagc 307 Query: 509 a---gcagcagcagataccgcagcagcaagctcctgcccacagccgtagtaacagcagag 565 | ||||||||| ||||| |||||||| | |||| ||||||| |||||||||||||||| Sbjct: 308 aacagcagcagcacataccacagcagcagggtcctacccacagtcgtagtaacagcagag 367 Query: 566 acatcgatccacaattcgcaaacatgtctctgaaaaacaatgattccaactcagggcgtg 625 || ||||| | ||||| |||||||||||||| ||| || ||| ||||||||||||||| Sbjct: 368 acctcgattcgcaatttgcaaacatgtctctaaaacacggcgatcccaactcagggcgtg 427 Query: 626 atgctgtccctggccttcgcattta 650 ||||||| || |||||||||||||| Sbjct: 428 atgctgttccaggccttcgcattta 452 >gb|AY105123.1| Zea mays PCO091259 mRNA sequence Length = 921 Score = 133 bits (67), Expect = 2e-27 Identities = 168/201 (83%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 454 caggagatgtttgagcgggaaataggccgtcttagatcattgttccagcagcagcagcag 513 ||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||| ||| Sbjct: 497 caggagatgtttgagagggaaattggccgccttagaacattgttccagcagcagcaacag 556 Query: 514 cagcaga---taccgcagcagcaagctcctgcccacagccgtagtaacagcagagacatc 570 || || | ||||||||||| |||||| |||| ||||| |||||||| |||||| | Sbjct: 557 caacaacatgtgccgcagcagcaggctcctacccatagccgcagtaacagtagagacctg 616 Query: 571 gatccacaattcgcaaacatgtctctgaaaaacaatgattccaactcagggcgtgatgct 630 ||| | ||||| |||||| ||||||||||| ||| |||| ||| |||||||| || ||| Sbjct: 617 gattcgcaatttgcaaacctgtctctgaaacacagtgatcccagttcagggcgcgacgct 676 Query: 631 gtccctggccttcgcatttaa 651 || ||||||| ||||||||| Sbjct: 677 atctctggcctccgcatttaa 697