BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf035f10 (1236 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070346.1| Oryza sativa (japonica cultivar-group) Os09g... 333 1e-87 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 gb|BT017647.1| Zea mays clone EL01N0439C07.c mRNA sequence 139 3e-29 >ref|NM_001070346.1| Oryza sativa (japonica cultivar-group) Os09g0540900 (Os09g0540900) mRNA, complete cds Length = 1725 Score = 333 bits (168), Expect = 1e-87 Identities = 403/481 (83%), Gaps = 9/481 (1%) Strand = Plus / Plus Query: 94 aacctctggaacaataatggccgaaatggtagtggcagtagcaatggctttggcggtcgt 153 |||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||||| Sbjct: 880 aacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgt 939 Query: 154 ggcggtc---ggaatcaccgtgaccatgggagagggggtagtttcacccctaggaactat 210 || |||| |||||| || ||||||| |||||||||||||||| ||||||||||||| Sbjct: 940 ggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactac 999 Query: 211 cctcgactgtcaccagtgccgcaccagcagcagcagccgggcatctaccagcccgggcct 270 || || | | || |||| | |||||| || ||||| ||||| |||||||| || ||| Sbjct: 1000 ccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggacct 1059 Query: 271 tttcaccgacctccgccacc------ccctgcccatttcatgatgccacagccttttgtg 324 |||| ||||| ||||| || ||||| |||||| ||| ||||||||||||||||| Sbjct: 1060 tttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtg 1119 Query: 325 ccatatgctccgccctttgcttaccctggtgatgtgcaagcctatcctttctacctcaca 384 ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||| ||| || Sbjct: 1120 ccatatgttccgcactttgcataccctgctgatgtgcaaggctatcctttctatctccca 1179 Query: 385 ccagtggagcagttccagaacatgcatcttgtccggcagccaacgcagcctttatgggtt 444 || |||||||||||||||||||||| |||||||||| | || |||||| ||||||||| Sbjct: 1180 cctatggagcagttccagaacatgcaccttgtccggccacaaatgcagccattatgggtt 1239 Query: 445 caccaagatcagcaaaatctccaagagaatattcagctgcagatggagttctattttagc 504 | ||| ||||| || ||||| |||||| |||| | |||||| || |||||||||||| Sbjct: 1240 ccccaggatcaacagaatcttcaagaggatatccgcacgcagatagaattctattttagc 1299 Query: 505 actaataatctgtgccacgacacatacttaaggagacatatgaatgatcaaggatgggta 564 ||||||||||||||||| ||||||| ||| |||||||| ||| ||||||| ||||||||| Sbjct: 1300 actaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatgggta 1359 Query: 565 c 565 | Sbjct: 1360 c 1360 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 165 bits (83), Expect = 5e-37 Identities = 225/272 (82%), Gaps = 9/272 (3%) Strand = Plus / Minus Query: 94 aacctctggaacaataatggccgaaatggtagtggcagtagcaatggctttggcggtcgt 153 |||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||||| Sbjct: 21001834 aacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgt 21001775 Query: 154 ggcggt---cggaatcaccgtgaccatgggagagggggtagtttcacccctaggaactat 210 || ||| ||||||| || ||||||| |||||||||||||||| ||||||||||||| Sbjct: 21001774 ggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactac 21001715 Query: 211 cctcgactgtcaccagtgccgcaccagcagcagcagccgggcatctaccagcccgggcct 270 || || | | || |||| | |||||| || ||||| ||||| |||||||| || ||| Sbjct: 21001714 ccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggacct 21001655 Query: 271 tttcaccga------cctccgccaccccctgcccatttcatgatgccacagccttttgtg 324 |||| ||| || ||||| ||||||| |||||| ||| ||||||||||||||||| Sbjct: 21001654 tttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtg 21001595 Query: 325 ccatatgctccgccctttgcttaccctggtga 356 ||||||| ||||| |||||| ||||||||||| Sbjct: 21001594 ccatatgttccgcactttgcataccctggtga 21001563 Score = 157 bits (79), Expect = 1e-34 Identities = 228/269 (84%), Gaps = 9/269 (3%) Strand = Plus / Minus Query: 972 atcatggatgtacagcgggtcatcttcagagtcggaagattttgtttgtttaggtcagac 1031 ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||||| Sbjct: 20998865 atcatggttgtacagtgggtcat-ttcggagtaagaagattttgtttgtttaggtcagac 20998807 Query: 1032 atgatggttgcacgtaaaggcatattaaaggcattg--agggggcaagcacaccaataat 1089 || ||| ||| || ||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 20998806 ttgttggctgctcggaaaggcatattaaaggcattgcaagggggcaaatacaccaaaaat 20998747 Query: 1090 aggaaataaattccggaagtataaatcctttttttttgtctgtatagtttt-gtctga-a 1147 |||||| || |||| ||| ||||||||||||||| |||||||||||||| ||| || | Sbjct: 20998746 aggaaacaatttccagaa-tataaatccttttttg--gtctgtatagtttttgtcggata 20998690 Query: 1148 aataaattatcggtgccttttcattatg-gatgatgccctgttgactgctgtggatgtta 1206 || ||| ||||||||||||||| || || | |||||| || |||| |||||||||| Sbjct: 20998689 aagaaacggtcggtgccttttcatcataagacggtgccctctttactgttgtggatgttc 20998630 Query: 1207 tctggggtttattttgggattaccccgtc 1235 ||||||||||||||||||||||||||| Sbjct: 20998629 ggtggggtttattttgggattaccccgtc 20998601 Score = 109 bits (55), Expect = 3e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 354 tgatgtgcaagcctatcctttctacctcacaccagtggagcagttccagaacatgcatct 413 ||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||| || Sbjct: 21001487 tgatgtgcaaggctatcctttctatctcccacctatggagcagttccagaacatgcacct 21001428 Query: 414 tgtccggcagccaacgcagcctttatgggttcaccaagatcagcaaaatctccaagagaa 473 |||||||| | || |||||| |||||||||| ||| ||||| || ||||| |||||| | Sbjct: 21001427 tgtccggccacaaatgcagccattatgggttccccaggatcaacagaatcttcaagagga 21001368 Query: 474 tat 476 ||| Sbjct: 21001367 tat 21001365 Score = 83.8 bits (42), Expect = 2e-12 Identities = 72/82 (87%) Strand = Plus / Minus Query: 594 gatgaggagatttacagacttggtagataccaattatatactagatgctattcgaggctc 653 |||||||||||||||| |||||||||| ||||| ||||||||||||||| |||| ||||| Sbjct: 20999342 gatgaggagatttacaaacttggtagacaccaactatatactagatgctgttcgtggctc 20999283 Query: 654 tgagatattggaagtacaggtt 675 ||| || | ||||| |||||| Sbjct: 20999282 agagctagtagaagtgcaggtt 20999261 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 501 tagcactaataatctgtgccacgacacatacttaaggagacatatgaatgatcaaggatg 560 ||||||||||||||||||||| ||||||| ||| |||||||| ||| ||||||| ||||| Sbjct: 21001257 tagcactaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatg 21001198 Query: 561 ggtac 565 ||||| Sbjct: 21001197 ggtac 21001193 >dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 165 bits (83), Expect = 5e-37 Identities = 225/272 (82%), Gaps = 9/272 (3%) Strand = Plus / Minus Query: 94 aacctctggaacaataatggccgaaatggtagtggcagtagcaatggctttggcggtcgt 153 |||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||||| Sbjct: 93923 aacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgt 93864 Query: 154 ggcggt---cggaatcaccgtgaccatgggagagggggtagtttcacccctaggaactat 210 || ||| ||||||| || ||||||| |||||||||||||||| ||||||||||||| Sbjct: 93863 ggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactac 93804 Query: 211 cctcgactgtcaccagtgccgcaccagcagcagcagccgggcatctaccagcccgggcct 270 || || | | || |||| | |||||| || ||||| ||||| |||||||| || ||| Sbjct: 93803 ccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggacct 93744 Query: 271 tttcaccga------cctccgccaccccctgcccatttcatgatgccacagccttttgtg 324 |||| ||| || ||||| ||||||| |||||| ||| ||||||||||||||||| Sbjct: 93743 tttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtg 93684 Query: 325 ccatatgctccgccctttgcttaccctggtga 356 ||||||| ||||| |||||| ||||||||||| Sbjct: 93683 ccatatgttccgcactttgcataccctggtga 93652 Score = 157 bits (79), Expect = 1e-34 Identities = 228/269 (84%), Gaps = 9/269 (3%) Strand = Plus / Minus Query: 972 atcatggatgtacagcgggtcatcttcagagtcggaagattttgtttgtttaggtcagac 1031 ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||||| Sbjct: 90954 atcatggttgtacagtgggtcat-ttcggagtaagaagattttgtttgtttaggtcagac 90896 Query: 1032 atgatggttgcacgtaaaggcatattaaaggcattg--agggggcaagcacaccaataat 1089 || ||| ||| || ||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 90895 ttgttggctgctcggaaaggcatattaaaggcattgcaagggggcaaatacaccaaaaat 90836 Query: 1090 aggaaataaattccggaagtataaatcctttttttttgtctgtatagtttt-gtctga-a 1147 |||||| || |||| ||| ||||||||||||||| |||||||||||||| ||| || | Sbjct: 90835 aggaaacaatttccagaa-tataaatccttttttg--gtctgtatagtttttgtcggata 90779 Query: 1148 aataaattatcggtgccttttcattatg-gatgatgccctgttgactgctgtggatgtta 1206 || ||| ||||||||||||||| || || | |||||| || |||| |||||||||| Sbjct: 90778 aagaaacggtcggtgccttttcatcataagacggtgccctctttactgttgtggatgttc 90719 Query: 1207 tctggggtttattttgggattaccccgtc 1235 ||||||||||||||||||||||||||| Sbjct: 90718 ggtggggtttattttgggattaccccgtc 90690 Score = 109 bits (55), Expect = 3e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 354 tgatgtgcaagcctatcctttctacctcacaccagtggagcagttccagaacatgcatct 413 ||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||| || Sbjct: 93576 tgatgtgcaaggctatcctttctatctcccacctatggagcagttccagaacatgcacct 93517 Query: 414 tgtccggcagccaacgcagcctttatgggttcaccaagatcagcaaaatctccaagagaa 473 |||||||| | || |||||| |||||||||| ||| ||||| || ||||| |||||| | Sbjct: 93516 tgtccggccacaaatgcagccattatgggttccccaggatcaacagaatcttcaagagga 93457 Query: 474 tat 476 ||| Sbjct: 93456 tat 93454 Score = 83.8 bits (42), Expect = 2e-12 Identities = 72/82 (87%) Strand = Plus / Minus Query: 594 gatgaggagatttacagacttggtagataccaattatatactagatgctattcgaggctc 653 |||||||||||||||| |||||||||| ||||| ||||||||||||||| |||| ||||| Sbjct: 91431 gatgaggagatttacaaacttggtagacaccaactatatactagatgctgttcgtggctc 91372 Query: 654 tgagatattggaagtacaggtt 675 ||| || | ||||| |||||| Sbjct: 91371 agagctagtagaagtgcaggtt 91350 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 501 tagcactaataatctgtgccacgacacatacttaaggagacatatgaatgatcaaggatg 560 ||||||||||||||||||||| ||||||| ||| |||||||| ||| ||||||| ||||| Sbjct: 93346 tagcactaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatg 93287 Query: 561 ggtac 565 ||||| Sbjct: 93286 ggtac 93282 >dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 165 bits (83), Expect = 5e-37 Identities = 225/272 (82%), Gaps = 9/272 (3%) Strand = Plus / Minus Query: 94 aacctctggaacaataatggccgaaatggtagtggcagtagcaatggctttggcggtcgt 153 |||||||||||||| ||||||||||||||| |||||||||||||||| |||| |||||| Sbjct: 23134 aacctctggaacaacaatggccgaaatggtggtggcagtagcaatggttttgttggtcgt 23075 Query: 154 ggcggt---cggaatcaccgtgaccatgggagagggggtagtttcacccctaggaactat 210 || ||| ||||||| || ||||||| |||||||||||||||| ||||||||||||| Sbjct: 23074 ggtggtcaccggaatcgtcgcgaccatgagagagggggtagtttctcccctaggaactac 23015 Query: 211 cctcgactgtcaccagtgccgcaccagcagcagcagccgggcatctaccagcccgggcct 270 || || | | || |||| | |||||| || ||||| ||||| |||||||| || ||| Sbjct: 23014 ccccggcacacgcccatgccaccccagcaacaacagccaggcatataccagcctggacct 22955 Query: 271 tttcaccga------cctccgccaccccctgcccatttcatgatgccacagccttttgtg 324 |||| ||| || ||||| ||||||| |||||| ||| ||||||||||||||||| Sbjct: 22954 tttccacgaccaccgccgccgccgccccctggccattttatggtgccacagccttttgtg 22895 Query: 325 ccatatgctccgccctttgcttaccctggtga 356 ||||||| ||||| |||||| ||||||||||| Sbjct: 22894 ccatatgttccgcactttgcataccctggtga 22863 Score = 157 bits (79), Expect = 1e-34 Identities = 228/269 (84%), Gaps = 9/269 (3%) Strand = Plus / Minus Query: 972 atcatggatgtacagcgggtcatcttcagagtcggaagattttgtttgtttaggtcagac 1031 ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||||| Sbjct: 20165 atcatggttgtacagtgggtcat-ttcggagtaagaagattttgtttgtttaggtcagac 20107 Query: 1032 atgatggttgcacgtaaaggcatattaaaggcattg--agggggcaagcacaccaataat 1089 || ||| ||| || ||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 20106 ttgttggctgctcggaaaggcatattaaaggcattgcaagggggcaaatacaccaaaaat 20047 Query: 1090 aggaaataaattccggaagtataaatcctttttttttgtctgtatagtttt-gtctga-a 1147 |||||| || |||| ||| ||||||||||||||| |||||||||||||| ||| || | Sbjct: 20046 aggaaacaatttccagaa-tataaatccttttttg--gtctgtatagtttttgtcggata 19990 Query: 1148 aataaattatcggtgccttttcattatg-gatgatgccctgttgactgctgtggatgtta 1206 || ||| ||||||||||||||| || || | |||||| || |||| |||||||||| Sbjct: 19989 aagaaacggtcggtgccttttcatcataagacggtgccctctttactgttgtggatgttc 19930 Query: 1207 tctggggtttattttgggattaccccgtc 1235 ||||||||||||||||||||||||||| Sbjct: 19929 ggtggggtttattttgggattaccccgtc 19901 Score = 109 bits (55), Expect = 3e-20 Identities = 106/123 (86%) Strand = Plus / Minus Query: 354 tgatgtgcaagcctatcctttctacctcacaccagtggagcagttccagaacatgcatct 413 ||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||| || Sbjct: 22787 tgatgtgcaaggctatcctttctatctcccacctatggagcagttccagaacatgcacct 22728 Query: 414 tgtccggcagccaacgcagcctttatgggttcaccaagatcagcaaaatctccaagagaa 473 |||||||| | || |||||| |||||||||| ||| ||||| || ||||| |||||| | Sbjct: 22727 tgtccggccacaaatgcagccattatgggttccccaggatcaacagaatcttcaagagga 22668 Query: 474 tat 476 ||| Sbjct: 22667 tat 22665 Score = 83.8 bits (42), Expect = 2e-12 Identities = 72/82 (87%) Strand = Plus / Minus Query: 594 gatgaggagatttacagacttggtagataccaattatatactagatgctattcgaggctc 653 |||||||||||||||| |||||||||| ||||| ||||||||||||||| |||| ||||| Sbjct: 20642 gatgaggagatttacaaacttggtagacaccaactatatactagatgctgttcgtggctc 20583 Query: 654 tgagatattggaagtacaggtt 675 ||| || | ||||| |||||| Sbjct: 20582 agagctagtagaagtgcaggtt 20561 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 501 tagcactaataatctgtgccacgacacatacttaaggagacatatgaatgatcaaggatg 560 ||||||||||||||||||||| ||||||| ||| |||||||| ||| ||||||| ||||| Sbjct: 22557 tagcactaataatctgtgccatgacacattcttgaggagacaaatggatgatcagggatg 22498 Query: 561 ggtac 565 ||||| Sbjct: 22497 ggtac 22493 >gb|BT017647.1| Zea mays clone EL01N0439C07.c mRNA sequence Length = 903 Score = 139 bits (70), Expect = 3e-29 Identities = 160/190 (84%) Strand = Plus / Plus Query: 484 cagatggagttctattttagcactaataatctgtgccacgacacatacttaaggagacat 543 ||||| ||||||||||||||||| |||||||| ||||| ||||||| ||| ||||||||| Sbjct: 285 cagatagagttctattttagcacaaataatctatgccatgacacattcttgaggagacat 344 Query: 544 atgaatgatcaaggatgggtacctatcgacctaattgctcaattcaaccggatgaggaga 603 ||||| ||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 345 atgaacaatcaaggatgggtacctattgacctaatcttagggttcaaccggatgagggcg 404 Query: 604 tttacagacttggtagataccaattatatactagatgctattcgaggctctgagatattg 663 ||||||| ||||| || ||||| || |||||||||||||| || || |||||| ||||| Sbjct: 405 tttacaggtttggtggacaccaactacatactagatgctatccgtggttctgagttattg 464 Query: 664 gaagtacagg 673 ||||| |||| Sbjct: 465 gaagtgcagg 474 Score = 101 bits (51), Expect = 7e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 235 cagcagcagcagccgggcatctaccagcccgggccttttcaccgacctccgccaccccct 294 |||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 36 cagcagcagcagcctggcatctaccagcctgggccctttcaccgaccaccaccaccggct 95 Query: 295 gcccatttcatgatgccacagcctttt 321 |||||||||||| ||||||||| |||| Sbjct: 96 gcccatttcatggtgccacagcatttt 122