BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf035a16 (999 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g... 293 7e-76 gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 293 7e-76 gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 293 7e-76 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 293 7e-76 emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:... 214 5e-52 >ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g0651800 (Os03g0651800) mRNA, complete cds Length = 669 Score = 293 bits (148), Expect = 7e-76 Identities = 357/426 (83%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 350 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 409 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 240 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 299 Query: 410 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 469 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 300 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 359 Query: 470 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcacaacggccaacaggctctt 529 | | ||||| ||||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 360 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 419 Query: 530 cgcccgcaccgtccacaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 589 | ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 420 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 479 Query: 590 gaagaacagctgcgccaactcggccgccgtcgccatcgcagcgttcagcagccagacgca 649 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 480 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 536 Query: 650 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 709 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 537 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 596 Query: 710 gattgcccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttccc 769 | | ||| || |||||||| ||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 597 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 656 Query: 770 acccaa 775 ||||| Sbjct: 657 gcccaa 662 Score = 210 bits (106), Expect = 8e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 105 ttcctggcgctcgccgccccctcgctggccggcgatcccgagatgctccaggacatctgc 164 |||||||||||||||||| |||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 37 ttcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgc 96 Query: 165 gtcgccgattacaaatccctccagggcccattgcggctgaacgggttcccgtgcaagagg 224 |||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 97 gtcgccgattacaagtccctccgaggcccgctgcggctgaacgggatcccgtgcaagagg 156 Query: 225 ccggagaacgtgacggtgaacgacttcttcttcgacgggctgacga 270 | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 157 ctggagaacgtgacggcgaacgacttcttcttcgacgggctgacga 202 >gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 293 bits (148), Expect = 7e-76 Identities = 357/426 (83%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 350 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 409 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 146677 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 146736 Query: 410 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 469 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 146737 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 146796 Query: 470 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcacaacggccaacaggctctt 529 | | ||||| ||||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 146797 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 146856 Query: 530 cgcccgcaccgtccacaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 589 | ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 146857 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 146916 Query: 590 gaagaacagctgcgccaactcggccgccgtcgccatcgcagcgttcagcagccagacgca 649 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 146917 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 146973 Query: 650 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 709 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 146974 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 147033 Query: 710 gattgcccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttccc 769 | | ||| || |||||||| ||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 147034 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 147093 Query: 770 acccaa 775 ||||| Sbjct: 147094 gcccaa 147099 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 196 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 255 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 146565 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 146624 Query: 256 tcgacgggctgacga 270 ||||||||||||||| Sbjct: 146625 tcgacgggctgacga 146639 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 105 ttcctggcgctcgccgccccctcgctggccggcgatcccgagatgctccaggacatctgc 164 |||||||||||||||||| |||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 145774 ttcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgc 145833 Query: 165 gtcgccgattacaaatccctcc 186 |||||||||||||| ||||||| Sbjct: 145834 gtcgccgattacaagtccctcc 145855 >gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 293 bits (148), Expect = 7e-76 Identities = 357/426 (83%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 350 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 409 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 62039 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 62098 Query: 410 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 469 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 62099 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 62158 Query: 470 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcacaacggccaacaggctctt 529 | | ||||| ||||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 62159 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 62218 Query: 530 cgcccgcaccgtccacaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 589 | ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 62219 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 62278 Query: 590 gaagaacagctgcgccaactcggccgccgtcgccatcgcagcgttcagcagccagacgca 649 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 62279 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 62335 Query: 650 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 709 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 62336 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 62395 Query: 710 gattgcccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttccc 769 | | ||| || |||||||| ||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 62396 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 62455 Query: 770 acccaa 775 ||||| Sbjct: 62456 gcccaa 62461 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 196 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 255 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 61927 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 61986 Query: 256 tcgacgggctgacga 270 ||||||||||||||| Sbjct: 61987 tcgacgggctgacga 62001 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 105 ttcctggcgctcgccgccccctcgctggccggcgatcccgagatgctccaggacatctgc 164 |||||||||||||||||| |||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 61136 ttcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgc 61195 Query: 165 gtcgccgattacaaatccctcc 186 |||||||||||||| ||||||| Sbjct: 61196 gtcgccgattacaagtccctcc 61217 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 293 bits (148), Expect = 7e-76 Identities = 357/426 (83%), Gaps = 3/426 (0%) Strand = Plus / Plus Query: 350 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 409 |||||||||| |||||| | ||| |||||||| || || |||| |||||||||||||| Sbjct: 25121549 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 25121608 Query: 410 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 469 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 25121609 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 25121668 Query: 470 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcacaacggccaacaggctctt 529 | | ||||| ||||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 25121669 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 25121728 Query: 530 cgcccgcaccgtccacaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 589 | ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 25121729 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 25121788 Query: 590 gaagaacagctgcgccaactcggccgccgtcgccatcgcagcgttcagcagccagacgca 649 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 25121789 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 25121845 Query: 650 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 709 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 25121846 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 25121905 Query: 710 gattgcccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttccc 769 | | ||| || |||||||| ||||| ||||| | ||||| |||||||||||||||||||| Sbjct: 25121906 gctggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttccc 25121965 Query: 770 acccaa 775 ||||| Sbjct: 25121966 gcccaa 25121971 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 196 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 255 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 25121437 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 25121496 Query: 256 tcgacgggctgacga 270 ||||||||||||||| Sbjct: 25121497 tcgacgggctgacga 25121511 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 105 ttcctggcgctcgccgccccctcgctggccggcgatcccgagatgctccaggacatctgc 164 |||||||||||||||||| |||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 25120646 ttcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgc 25120705 Query: 165 gtcgccgattacaaatccctcc 186 |||||||||||||| ||||||| Sbjct: 25120706 gtcgccgattacaagtccctcc 25120727 >emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007O02, full insert sequence Length = 1034 Score = 214 bits (108), Expect = 5e-52 Identities = 213/248 (85%) Strand = Plus / Plus Query: 350 gacggcggcggacgtggacaagctcccggggctcaataccctgggtgtgtccatggcgcg 409 |||||||||| |||||| | || |||||||| || || |||| |||||||||||||| Sbjct: 498 gacggcggcgagcgtggagagcctgccggggctgaacacgatgggggtgtccatggcgcg 557 Query: 410 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 469 |||||||||||||| ||||||||||||| |||||||| ||||| || || || ||||| Sbjct: 558 tatcgactacgcgccatgggggctgaacccaccgcacacgcacccccgtgccaccgagat 617 Query: 470 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcacaacggccaacaggctctt 529 | ||||||| |||||||||| |||||||||||||||||||| || ||||||| |||||| Sbjct: 618 catcttcgtcgtcgagggctctctcgacgtcggcttcgtcaccaccgccaacaagctctt 677 Query: 530 cgcccgcaccgtccacaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 589 | ||||||||||| |||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 678 cacccgcaccgtctgcaagggggaggtgttcgtcttcccgcgggggctcgtccacttcca 737 Query: 590 gaagaaca 597 |||||||| Sbjct: 738 gaagaaca 745 Score = 111 bits (56), Expect = 6e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 196 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 255 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 386 tgcggctgaacgggttcccgtgcaagaggatagagaacgtgacggcgaacgacttcttct 445 Query: 256 tcgacgggctga 267 |||||||||||| Sbjct: 446 tcgacgggctga 457 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 109 tggcgctcgccgccccctcgctggccggcgatcccgagatgctccaggacatctgcgtcg 168 |||||||||||||| |||| || |||||||| || || |||||||||||| ||||||||| Sbjct: 179 tggcgctcgccgccacctccctcgccggcgacccggacatgctccaggacgtctgcgtcg 238 Query: 169 ccgattacaaatccctc 185 |||| ||||| |||||| Sbjct: 239 ccgactacaagtccctc 255