BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf034p18 (1315 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001053934.1| Oryza sativa (japonica cultivar-group) Os02g... 541 e-150 gb|AY082959.1| Hordeum vulgare clone HVSMEb0009K09 CONSTANS-like... 379 e-101 gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) g... 353 1e-93 dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 2e-92 emb|CR855209.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 343 1e-90 >ref|NM_001053934.1| Oryza sativa (japonica cultivar-group) Os02g0610500 (Os02g0610500) mRNA, complete cds Length = 1388 Score = 541 bits (273), Expect = e-150 Identities = 439/493 (89%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 501 aggaggatgcggatgatgacgggagcaacgaggctgaggcggcctcgtggcttctccccg 560 |||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 526 aggaggatgcggatgatgaccggagcaacgaggccgaggcggcgtcgtggcttctccccg 585 Query: 561 aacccgac---aagggccacgaggacagcgccgcagcag---acgcgttcttcgccgact 614 | |||||| || |||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 586 agcccgacgacaatagccacgaggatagcgccgcagccgccgacgcgttcttcgccgaca 645 Query: 615 cggacgcgtacctcggcctcgatctggacttcgcccgctccatggacggaatcaaggcca 674 | | ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||| Sbjct: 646 ccggcgcgtacctcggcgtcgacctggacttcgcccggtccatggacggaatcaaggcca 705 Query: 675 tcggggtgctggccgcccagcccgagctcgacctcgccgccggcaatctcttctaccccg 734 ||||||| | || ||| | ||||||||| |||||| ||||||||| || |||||||||| Sbjct: 706 tcggggtaccggtcgcgccgcccgagctggacctcaccgccggcagccttttctaccccg 765 Query: 735 aacactccatgaaccacagtgtgtcgtcgtcggaggtggcggtggtgccggacgcgttgt 794 ||||||||||| |||||| |||||||||||||||| ||| | || ||||||||| ||| Sbjct: 766 aacactccatggcccacagcttgtcgtcgtcggaggtcgcgatcgtaccggacgcgctgt 825 Query: 795 cggcgggcgcagcgccggctccgtccttggcggtggtggcgagcaaggggaaggagaggg 854 |||||||| | ||| || | || ||| ||||||||||||||||||||||||||||| Sbjct: 826 cggcgggctcggcggcgccgcccatggtggtggtggtggcgagcaaggggaaggagaggg 885 Query: 855 aggcgcggctgatgcggtaccgggagaagcgcaagaaccggcggttcgacaagaccatcc 914 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 886 aggcgcggctgatgcggtacagggagaagcgcaagaaccggcggttcgacaagaccatcc 945 Query: 915 gctacgcgtcccgcaaggcgtacgccgagacgcggccgcgcatcaagggccggttcacca 974 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 946 ggtacgcgtcccgcaaggcgtacgccgagacgcggccgcgcatcaagggccggttcgcca 1005 Query: 975 agcgcaccaccga 987 |||||||| |||| Sbjct: 1006 agcgcaccgccga 1018 Score = 341 bits (172), Expect = 4e-90 Identities = 280/316 (88%) Strand = Plus / Plus Query: 146 tgggggctgggcgcgcggccgtgcgacacgtgcggcgtggacgcggcgcggctctactgc 205 |||||| |||| ||||| |||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 174 tgggggttggggacgcgggcgtgcgactcgtgcggcggggaggcggcgcggctctactgc 233 Query: 206 cgcgctgacggtgcgttcctctgccccggatgcgacgcgcgcacgcacggcgcggggtcc 265 ||||| ||||| |||||||| ||| || | ||||||||||| |||||||||| ||||| Sbjct: 234 cgcgcggacggggcgttcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcg 293 Query: 266 cgccacgcgcgcgtctggctctgcgaggtctgcgagcacgcgcccgccgccgtcacctgc 325 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 294 cgccacgcgcgggtgtggctgtgcgaggtgtgcgagcacgcgcccgccgccgtcacgtgc 353 Query: 326 cgcgccgacgccgccgctctctgcgccgcctgcgacgccgacatccactccgccaacccg 385 || || |||||||| || || ||||||||||||||||||||||||||||| || |||||| Sbjct: 354 cgggcggacgccgcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccg 413 Query: 386 ctcgcgcgccggcacgagcgactccccgtagcgccattcttgggcgcgctcgccgacgcg 445 ||||||||| |||||||||| |||||||| ||||| ||||| ||| |||||||||||||| Sbjct: 414 ctcgcgcgcaggcacgagcgcctccccgtcgcgcccttcttcggcccgctcgccgacgcg 473 Query: 446 ccccagcccttcccct 461 || ||||||||||||| Sbjct: 474 ccgcagcccttcccct 489 >gb|AY082959.1| Hordeum vulgare clone HVSMEb0009K09 CONSTANS-like protein CO5 (CO5) mRNA, partial cds Length = 539 Score = 379 bits (191), Expect = e-101 Identities = 321/364 (88%), Gaps = 9/364 (2%) Strand = Plus / Plus Query: 728 taccccgaacactccatgaaccacagtgtgtcgtcgtcggaggtggcggtggtgccggac 787 ||||| |||||||||||||||||||| |||| |||| ||||| |||||||| |||||| Sbjct: 1 taccctgaacactccatgaaccacagcatgtcaacgtccgaggtagcggtggttccggac 60 Query: 788 gcgttgtcggcgggcg------cagcgccggctccgtccttggcggtggtggcgagcaag 841 ||| |||| || |||| | ||||| || ||||| |||||||||| ||||||||| Sbjct: 61 gcgctgtcagccggcggggccccggcgccagcgccgtcggtggcggtggtagcgagcaag 120 Query: 842 gggaaggagagggaggcgcggctgatgcggtaccgggagaagcgcaagaaccggcggttc 901 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gggaaggagcgggaggcccggctgatgcggtaccgggagaagcgcaagaaccggcggttc 180 Query: 902 gacaagaccatccgctacgcgtcccgcaaggcgtacgccgagacgcggccgcgcatcaag 961 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagaagaccatccgctacgcgtcccgcaaggcgtacgccgagacgcggccgcgcatcaag 240 Query: 962 ggccggttcaccaagcgcaccaccgaggacgacgcgctgctggagcacgacagggcgtgc 1021 ||||||||| ||||||||||| ||||||||||||| ||||||||| ||| || ||| | Sbjct: 241 ggccggttcgccaagcgcaccgccgaggacgacgc---gctggagcaggacgggccgttc 297 Query: 1022 tcgccggcgatgtcggcgctcgtggcgtcggacggcgactacggcgtcgtgccgtcgttc 1081 ||||| ||| |||||||| | |||| |||||||| |||||||||||||||||||||||| Sbjct: 298 tcgcccgcgtcgtcggcgcacctggcatcggacggtgactacggcgtcgtgccgtcgttc 357 Query: 1082 tgag 1085 |||| Sbjct: 358 tgag 361 >gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) gene, complete cds Length = 1060 Score = 353 bits (178), Expect = 1e-93 Identities = 243/264 (92%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 822 tggcggtggtggcgagcaaggggaaggagagggaggcgcggctgatgcggtaccgggaga 881 |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 790 tggcggtggtagcgagcaaggggaaggagcgggaggcccggctgatgcggtaccgggaga 849 Query: 882 agcgcaagaaccggcggttcgacaagaccatccgctacgcgtcccgcaaggcgtacgccg 941 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 850 agcgcaagaaccggcggttccagaagaccatccgctacgcgtcccgcaaggcgtacgccg 909 Query: 942 agacgcggccgcgcatcaagggccggttcaccaagcgcaccaccgaggacgacgcgctgc 1001 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || Sbjct: 910 agacgcggccgcgcatcaagggccggttcgccaagcgcaccgccgaggacgacgc---gc 966 Query: 1002 tggagcacgacagggcgtgctcgccggcgatgtcggcgctcgtggcgtcggacggcgact 1061 ||||||| ||| || ||| |||||| ||| |||||||| | |||| |||||||| |||| Sbjct: 967 tggagcaggacgggccgttctcgcccgcgtcgtcggcgcacctggcatcggacggtgact 1026 Query: 1062 acggcgtcgtgccgtcgttctgag 1085 |||||||||||||||||||||||| Sbjct: 1027 acggcgtcgtgccgtcgttctgag 1050 Score = 327 bits (165), Expect = 7e-86 Identities = 287/327 (87%), Gaps = 3/327 (0%) Strand = Plus / Plus Query: 137 gcggggtgctgggggctgggcgcgcggccgtgcgacacgtgcggcgtggacgcggcgcgg 196 ||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||| Sbjct: 58 gcggggttctgggggctggccggccggccgtgcgacacgtgcgccgtggacgcggcgcgg 117 Query: 197 ctctactgccgcgctgacggtgcgttcctctgccccggatgcgacgcgcgcacgcacggc 256 ||||||||||| ||||| || | ||||||| |||| |||||||||||| |||||||| Sbjct: 118 ctctactgccggttggacggcgcctacctctgcgccgggtgcgacgcgcgcgcgcacggc 177 Query: 257 gcggggtcccgccacgcgcgcgtctggctctgcgaggtctgcgagcacgcgcccgccgcc 316 || || || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 gccggctcgcgccacgcgcgcgtctggctctgcgaggtctgcgagcacgcgcccgccgcg 237 Query: 317 gtcacctgccgcgccgacgccgccgctctctgcgccgcctgcgacgccgacatccactcc 376 ||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||| Sbjct: 238 gtcacctgccgcgccgacgccgctgcgctctgcgccacgtgcgacgccgacatccactcc 297 Query: 377 gccaacccgctcgcgcgccggcacgagcgactccccgtagcgccattcttgggcgcgctc 436 |||||||||||||| |||| ||| | |||||| |||| ||||| ||||||||| Sbjct: 298 gccaacccgctcgccagccgccacctccttctcccc---acgcctttcttcggcgcgctc 354 Query: 437 gccgacgcgccccagcccttcccctcc 463 |||||| | ||||||||| |||||||| Sbjct: 355 gccgacccaccccagcccgtcccctcc 381 Score = 222 bits (112), Expect = 3e-54 Identities = 218/254 (85%), Gaps = 12/254 (4%) Strand = Plus / Plus Query: 500 caggaggatgcggatgatgacgggagcaacgaggctgaggcggcctcgtggcttctcccc 559 |||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 403 caggaggacgcggaagacgacgggagcaacgaggccgaggcggcctcgtggcttcttccc 462 Query: 560 gaacccgacaagggccacgaggacagcgccgcagcagacgcgttcttcgccgactcggac 619 || || | | | ||| ||||||||||||||| | |||||||||||||||||||| Sbjct: 463 gagcctggcgacagccccgaggacagcgccgc------cacgttcttcgccgactcggac 516 Query: 620 gcgtacctcggcctcgatctggacttcgcccgctccatggacggaatcaaggccatcggg 679 ||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||| Sbjct: 517 gcgtacctc------gatctggacttcgtccggtccatggacgggatcaaggccatcggg 570 Query: 680 gtgctggccgcccagcccgagctcgacctcgccgccggcaatctcttctaccccgaacac 739 |||| || ||||| |||||||||||||||||| ||||| |||||||||||| |||||| Sbjct: 571 gtgccggtcgccccttccgagctcgacctcgccggcggcactctcttctaccctgaacac 630 Query: 740 tccatgaaccacag 753 |||||||||||||| Sbjct: 631 tccatgaaccacag 644 >dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O11, full insert sequence Length = 1396 Score = 349 bits (176), Expect = 2e-92 Identities = 290/328 (88%) Strand = Plus / Plus Query: 126 cggtggcgggcgcggggtgctgggggctgggcgcgcggccgtgcgacacgtgcggcgtgg 185 |||||||||| | || || ||||||||||| ||| || |||||||| ||||||||| || Sbjct: 149 cggtggcgggaggggcgtactgggggctggcggcgagggcgtgcgacgcgtgcggcgggg 208 Query: 186 acgcggcgcggctctactgccgcgctgacggtgcgttcctctgccccggatgcgacgcgc 245 | ||||||||||| | ||||||||| |||| |||||||||||| |||| |||||||||| Sbjct: 209 aggcggcgcggctgttctgccgcgccgacgcggcgttcctctgcgccgggtgcgacgcgc 268 Query: 246 gcacgcacggcgcggggtcccgccacgcgcgcgtctggctctgcgaggtctgcgagcacg 305 | ||||||| | ||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct: 269 gggcgcacgggcccgggtcgcgccacgcgcgggtgtggctctgcgaggtctgcgagcacg 328 Query: 306 cgcccgccgccgtcacctgccgcgccgacgccgccgctctctgcgccgcctgcgacgccg 365 ||||||| || ||||| ||| | |||||||||||||| |||||||||||||||||||||| Sbjct: 329 cgcccgcggcggtcacgtgcagggccgacgccgccgcgctctgcgccgcctgcgacgccg 388 Query: 366 acatccactccgccaacccgctcgcgcgccggcacgagcgactccccgtagcgccattct 425 ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 389 acatccactccgccaacccgctcgcgcgccgccacgagcggctccccgtcgcgcccttct 448 Query: 426 tgggcgcgctcgccgacgcgccccagcc 453 | ||||||||||||||||||||| |||| Sbjct: 449 tcggcgcgctcgccgacgcgcccaagcc 476 Score = 212 bits (107), Expect = 3e-51 Identities = 143/155 (92%) Strand = Plus / Plus Query: 829 ggtggcgagcaaggggaaggagagggaggcgcggctgatgcggtaccgggagaagcgcaa 888 ||||| ||||| |||| |||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 819 ggtggtgagcagggggcgggagcgggaggcgcggctgatgcggtacagggagaagcgcaa 878 Query: 889 gaaccggcggttcgacaagaccatccgctacgcgtcccgcaaggcgtacgccgagacgcg 948 || |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 879 gagccggcggttcgagaagaccatccggtacgcgtcccgcaaggcgtacgcggagacgcg 938 Query: 949 gccgcgcatcaagggccggttcaccaagcgcacca 983 |||||||||||||||||| ||| |||||||||||| Sbjct: 939 gccgcgcatcaagggccgcttcgccaagcgcacca 973 Score = 127 bits (64), Expect = 1e-25 Identities = 136/160 (85%) Strand = Plus / Plus Query: 631 cctcgatctggacttcgcccgctccatggacggaatcaaggccatcggggtgctggccgc 690 |||||| || |||||||| ||||||||||||| |||||||||||||| || | | || Sbjct: 633 cctcgacctcgacttcgcgcgctccatggacgacatcaaggccatcggcgtccagaacgg 692 Query: 691 ccagcccgagctcgacctcgccgccggcaatctcttctaccccgaacactccatgaacca 750 | ||||||||||||| || ||| |||||| ||||||||| |||| |||||||||||||| Sbjct: 693 tccgcccgagctcgacatcaccggcggcaagctcttctactccgaccactccatgaacca 752 Query: 751 cagtgtgtcgtcgtcggaggtggcggtggtgccggacgcg 790 ||| || || || ||||||| ||||||||||||||||||| Sbjct: 753 cagcgtatcatcctcggaggcggcggtggtgccggacgcg 792 >emb|CR855209.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0092E01, complete sequence Length = 86215 Score = 343 bits (173), Expect = 1e-90 Identities = 275/309 (88%) Strand = Plus / Plus Query: 145 ctgggggctgggcgcgcggccgtgcgacacgtgcggcgtggacgcggcgcggctctactg 204 ||||||||||| ||| || |||||||| ||||||||| ||| ||||||||||| | ||| Sbjct: 59096 ctgggggctggcggcgagggcgtgcgacgcgtgcggcggggaggcggcgcggctgttctg 59155 Query: 205 ccgcgctgacggtgcgttcctctgccccggatgcgacgcgcgcacgcacggcgcggggtc 264 |||||| |||| |||||||||||| |||| ||||||||||| ||||||| | ||||| Sbjct: 59156 ccgcgccgacgcggcgttcctctgcgccgggtgcgacgcgcgggcgcacgggcccgggtc 59215 Query: 265 ccgccacgcgcgcgtctggctctgcgaggtctgcgagcacgcgcccgccgccgtcacctg 324 ||||||||||| || |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 59216 gcgccacgcgcgggtgtggctctgcgaggtctgcgagcacgcgcccgcggcggtcacgtg 59275 Query: 325 ccgcgccgacgccgccgctctctgcgccgcctgcgacgccgacatccactccgccaaccc 384 | | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 59276 cagggccgacgccgccgcgctctgcgccgcctgcgacgccgacatccactccgccaaccc 59335 Query: 385 gctcgcgcgccggcacgagcgactccccgtagcgccattcttgggcgcgctcgccgacgc 444 |||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 59336 gctcgcgcgccgccacgagcggctccccgtcgcgcccttcttcggcgcgctcgccgacgc 59395 Query: 445 gccccagcc 453 |||| |||| Sbjct: 59396 gcccaagcc 59404 Score = 212 bits (107), Expect = 3e-51 Identities = 143/155 (92%) Strand = Plus / Plus Query: 829 ggtggcgagcaaggggaaggagagggaggcgcggctgatgcggtaccgggagaagcgcaa 888 ||||| ||||| |||| |||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 59841 ggtggtgagcagggggcgggagcgggaggcgcggctgatgcggtacagggagaagcgcaa 59900 Query: 889 gaaccggcggttcgacaagaccatccgctacgcgtcccgcaaggcgtacgccgagacgcg 948 || |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 59901 gagccggcggttcgagaagaccatccggtacgcgtcccgcaaggcgtacgcggagacgcg 59960 Query: 949 gccgcgcatcaagggccggttcaccaagcgcacca 983 |||||||||||||||||| ||| |||||||||||| Sbjct: 59961 gccgcgcatcaagggccgcttcgccaagcgcacca 59995