BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf034n07 (895 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ185896.1| Sorghum bicolor putative mitochondrial Rieske pro... 345 2e-91 gb|AY105531.1| Zea mays PCO113958 mRNA sequence 329 1e-86 emb|CT830885.1| Oryza sativa (indica cultivar-group) cDNA clone:... 297 4e-77 ref|NM_001053510.1| Oryza sativa (japonica cultivar-group) Os02g... 297 4e-77 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 297 4e-77 >gb|DQ185896.1| Sorghum bicolor putative mitochondrial Rieske protein mRNA, partial cds; nuclear gene for mitochondrial product Length = 625 Score = 345 bits (174), Expect = 2e-91 Identities = 309/354 (87%) Strand = Plus / Plus Query: 377 attgagcctggcaccactgtgactgtgaagtggcggggcaagccggtcttcatccggcgc 436 ||||||||||||||||| || |||||||||||||| |||||||| ||||||||| |||| Sbjct: 84 attgagcctggcaccacggtaactgtgaagtggcgtggcaagccagtcttcatcaggcgg 143 Query: 437 aggacagaggatgacatcaagctggccaacagcgttgacattgcatctcttcgtgacccg 496 |||||||| ||||| |||||| |||||||||| ||||| |||| || || || |||| Sbjct: 144 aggacagatgatgatatcaagttggccaacagtgttgatgttgcgtccctccgccaccca 203 Query: 497 cagcaggatgcagagcgtgtcaagaaccctgaatggcttgttgtcattggtgtctgcact 556 ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 204 gagcaggatgcagagcgtgtcaagaaccctgaatggctggtcgtcattggggtctgcact 263 Query: 557 cacttgggctgcattcccctccccaacgctggagacttcggcggctggttctgcccgtgc 616 ||| |||||||||| || |||||||| || |||||||| ||||||||||||||||||||| Sbjct: 264 cacctgggctgcatcccgctccccaatgcaggagactttggcggctggttctgcccgtgc 323 Query: 617 catggctcgcactacgacatctccggtaggatccggaagggcccagcaccctacaacctg 676 || ||||| ||||| |||||||| ||||||||||| |||||||| ||||||| ||| ||| Sbjct: 324 cacggctcacactatgacatctctggtaggatccgcaagggcccggcacccttcaatctg 383 Query: 677 gaggtcccgacctacagtttcttggaggaaaacaagctactcgttggctgagat 730 || || ||||| ||||| |||||||| || |||||||| ||| | ||||||||| Sbjct: 384 gaagtgccgacatacagcttcttggaagataacaagcttctcatcggctgagat 437 >gb|AY105531.1| Zea mays PCO113958 mRNA sequence Length = 1217 Score = 329 bits (166), Expect = 1e-86 Identities = 307/354 (86%) Strand = Plus / Plus Query: 377 attgagcctggcaccactgtgactgtgaagtggcggggcaagccggtcttcatccggcgc 436 ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 612 attgagcctggaaccacggtgacggtgaagtggcgtggcaagccggtcttcataaggcgg 671 Query: 437 aggacagaggatgacatcaagctggccaacagcgttgacattgcatctcttcgtgacccg 496 |||||||||||||| |||||| |||||||||| |||||| | ||||| || || |||| Sbjct: 672 aggacagaggatgatatcaagttggccaacagtgttgacgtcgcatccctccgccaccca 731 Query: 497 cagcaggatgcagagcgtgtcaagaaccctgaatggcttgttgtcattggtgtctgcact 556 |||| ||||||||||| ||||||||||| |||||||| || |||||||| ||||||||| Sbjct: 732 gagcaagatgcagagcgcgtcaagaaccccgaatggctggtcgtcattggggtctgcact 791 Query: 557 cacttgggctgcattcccctccccaacgctggagacttcggcggctggttctgcccgtgc 616 ||| |||||||||| || ||||| || || |||||||| || |||||||||||||||||| Sbjct: 792 cacctgggctgcatcccgctccctaatgcaggagactttggtggctggttctgcccgtgc 851 Query: 617 catggctcgcactacgacatctccggtaggatccggaagggcccagcaccctacaacctg 676 || ||||||||||||||||| || ||||||||||| |||||||| ||||||| ||||||| Sbjct: 852 cacggctcgcactacgacatttctggtaggatccgcaagggcccggcacccttcaacctg 911 Query: 677 gaggtcccgacctacagtttcttggaggaaaacaagctactcgttggctgagat 730 || || ||||| ||||| |||||||| || |||||||| ||| | ||||||||| Sbjct: 912 gaagtgccgacatacagcttcttggaagagaacaagcttctcatcggctgagat 965 Score = 143 bits (72), Expect = 1e-30 Identities = 138/160 (86%) Strand = Plus / Plus Query: 210 cgcgcttcgccatcgactcccccttcttcgccgcctccaggggcttttcagctgaaaccc 269 |||| ||||||||||| || |||||||||||||| |||| || |||||||| || || | Sbjct: 277 cgcgtttcgccatcgaatctcccttcttcgccgctgccagagggttttcagcagagactc 336 Query: 270 ttgttccaaggaaccgggatgtgggtttggctgagctgccagcaactgtggcagcagtga 329 ||| |||||| |||| ||||||||| || ||||||| ||||||||||||||||| |||| Sbjct: 337 ttgctccaagaaaccaggatgtgggcttatctgagctcccagcaactgtggcagctgtga 396 Query: 330 agaatcccagtgcaaaaatcgtctacgatgagtataacca 369 ||||||| |||| ||||||||| || |||||||||||||| Sbjct: 397 agaatccaagtggaaaaatcgtgtatgatgagtataacca 436 >emb|CT830885.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021N23, full insert sequence Length = 1076 Score = 297 bits (150), Expect = 4e-77 Identities = 276/318 (86%) Strand = Plus / Plus Query: 374 agtattgagcctggcaccactgtgactgtgaagtggcggggcaagccggtcttcatccgg 433 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||| || Sbjct: 558 agtattgagcctggcaccactgtgaccgtgaagtggcggggcaagccagtttttatcagg 617 Query: 434 cgcaggacagaggatgacatcaagctggccaacagcgttgacattgcatctcttcgtgac 493 |||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| Sbjct: 618 cgcaggacagaggaagacatcaacttggcgaacagcgttgacattggatctcttcgtgac 677 Query: 494 ccgcagcaggatgcagagcgtgtcaagaaccctgaatggcttgttgtcattggtgtctgc 553 || ||||||||||| || || |||||||||||||| ||||| ||||| ||||| || || Sbjct: 678 ccacagcaggatgcggaacgagtcaagaaccctgagtggctggttgtgattggggtgtgt 737 Query: 554 actcacttgggctgcattcccctccccaacgctggagacttcggcggctggttctgcccg 613 ||||| ||||||||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 738 actcatctgggctgcattccacttcccaacgctggtgactttggtggctggttctgtcca 797 Query: 614 tgccatggctcgcactacgacatctccggtaggatccggaagggcccagcaccctacaac 673 |||||||| || || || || || || ||||| ||||| |||||||| ||||| |||||| Sbjct: 798 tgccatggatcacattatgatatatcaggtagaatccgtaagggccctgcaccatacaac 857 Query: 674 ctggaggtcccgacctac 691 || || |||||||||||| Sbjct: 858 ctcgaagtcccgacctac 875 Score = 135 bits (68), Expect = 3e-28 Identities = 143/168 (85%) Strand = Plus / Plus Query: 202 ccagaagccgcgcttcgccatcgactcccccttcttcgccgcctccaggggcttttcagc 261 ||||| ||||||||||||| | || ||||| ||||||||||| || ||||||||||| | Sbjct: 218 ccagaggccgcgcttcgccgtggattccccgttcttcgccgcttcgaggggcttttcctc 277 Query: 262 tgaaacccttgttccaaggaaccgggatgtgggtttggctgagctgccagcaactgtggc 321 ||||| |||||||||||||||| |||||| | ||| ||||||| |||||||| ||| | Sbjct: 278 agaaactcttgttccaaggaaccaggatgtaagcttgactgagcttccagcaacagtgtc 337 Query: 322 agcagtgaagaatcccagtgcaaaaatcgtctacgatgagtataacca 369 ||| |||||||||||||||||||| || || || ||||| |||||||| Sbjct: 338 agctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 385 >ref|NM_001053510.1| Oryza sativa (japonica cultivar-group) Os02g0520800 (Os02g0520800) mRNA, complete cds Length = 1156 Score = 297 bits (150), Expect = 4e-77 Identities = 276/318 (86%) Strand = Plus / Plus Query: 374 agtattgagcctggcaccactgtgactgtgaagtggcggggcaagccggtcttcatccgg 433 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||| || Sbjct: 555 agtattgagcctggcaccactgtgaccgtgaagtggcggggcaagccagtttttatcagg 614 Query: 434 cgcaggacagaggatgacatcaagctggccaacagcgttgacattgcatctcttcgtgac 493 |||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| Sbjct: 615 cgcaggacagaggaagacatcaacttggcgaacagcgttgacattggatctcttcgtgac 674 Query: 494 ccgcagcaggatgcagagcgtgtcaagaaccctgaatggcttgttgtcattggtgtctgc 553 || ||||||||||| || || |||||||||||||| ||||| ||||| ||||| || || Sbjct: 675 ccacagcaggatgcggaacgagtcaagaaccctgagtggctggttgtgattggggtgtgt 734 Query: 554 actcacttgggctgcattcccctccccaacgctggagacttcggcggctggttctgcccg 613 ||||| ||||||||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 735 actcatctgggctgcattccacttcccaacgctggtgactttggtggctggttctgtcca 794 Query: 614 tgccatggctcgcactacgacatctccggtaggatccggaagggcccagcaccctacaac 673 |||||||| || || || || || || ||||| ||||| |||||||| ||||| |||||| Sbjct: 795 tgccatggatcacattatgatatatcaggtagaatccgtaagggccctgcaccatacaac 854 Query: 674 ctggaggtcccgacctac 691 || || |||||||||||| Sbjct: 855 ctcgaagtcccgacctac 872 Score = 135 bits (68), Expect = 3e-28 Identities = 143/168 (85%) Strand = Plus / Plus Query: 202 ccagaagccgcgcttcgccatcgactcccccttcttcgccgcctccaggggcttttcagc 261 ||||| ||||||||||||| | || ||||| ||||||||||| || ||||||||||| | Sbjct: 215 ccagaggccgcgcttcgccgtggattccccgttcttcgccgcttcgaggggcttttcctc 274 Query: 262 tgaaacccttgttccaaggaaccgggatgtgggtttggctgagctgccagcaactgtggc 321 ||||| |||||||||||||||| |||||| | ||| ||||||| |||||||| ||| | Sbjct: 275 agaaactcttgttccaaggaaccaggatgtaagcttgactgagcttccagcaacagtgtc 334 Query: 322 agcagtgaagaatcccagtgcaaaaatcgtctacgatgagtataacca 369 ||| |||||||||||||||||||| || || || ||||| |||||||| Sbjct: 335 agctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 382 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 297 bits (150), Expect = 4e-77 Identities = 276/318 (86%) Strand = Plus / Minus Query: 374 agtattgagcctggcaccactgtgactgtgaagtggcggggcaagccggtcttcatccgg 433 |||||||||||||||||||||||||| |||||||||||||||||||| || || ||| || Sbjct: 19000944 agtattgagcctggcaccactgtgaccgtgaagtggcggggcaagccagtttttatcagg 19000885 Query: 434 cgcaggacagaggatgacatcaagctggccaacagcgttgacattgcatctcttcgtgac 493 |||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| Sbjct: 19000884 cgcaggacagaggaagacatcaacttggcgaacagcgttgacattggatctcttcgtgac 19000825 Query: 494 ccgcagcaggatgcagagcgtgtcaagaaccctgaatggcttgttgtcattggtgtctgc 553 || ||||||||||| || || |||||||||||||| ||||| ||||| ||||| || || Sbjct: 19000824 ccacagcaggatgcggaacgagtcaagaaccctgagtggctggttgtgattggggtgtgt 19000765 Query: 554 actcacttgggctgcattcccctccccaacgctggagacttcggcggctggttctgcccg 613 ||||| ||||||||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 19000764 actcatctgggctgcattccacttcccaacgctggtgactttggtggctggttctgtcca 19000705 Query: 614 tgccatggctcgcactacgacatctccggtaggatccggaagggcccagcaccctacaac 673 |||||||| || || || || || || ||||| ||||| |||||||| ||||| |||||| Sbjct: 19000704 tgccatggatcacattatgatatatcaggtagaatccgtaagggccctgcaccatacaac 19000645 Query: 674 ctggaggtcccgacctac 691 || || |||||||||||| Sbjct: 19000644 ctcgaagtcccgacctac 19000627 Score = 93.7 bits (47), Expect = 1e-15 Identities = 92/107 (85%) Strand = Plus / Minus Query: 263 gaaacccttgttccaaggaaccgggatgtgggtttggctgagctgccagcaactgtggca 322 ||||| |||||||||||||||| |||||| | ||| ||||||| |||||||| ||| || Sbjct: 19001223 gaaactcttgttccaaggaaccaggatgtaagcttgactgagcttccagcaacagtgtca 19001164 Query: 323 gcagtgaagaatcccagtgcaaaaatcgtctacgatgagtataacca 369 || |||||||||||||||||||| || || || ||||| |||||||| Sbjct: 19001163 gctgtgaagaatcccagtgcaaagattgtatatgatgaatataacca 19001117