BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf034h03 (1359 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049025.1| Oryza sativa (japonica cultivar-group) Os01g... 513 e-142 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 412 e-111 dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 412 e-111 gb|AY108102.1| Zea mays PCO073188 mRNA sequence 143 2e-30 >ref|NM_001049025.1| Oryza sativa (japonica cultivar-group) Os01g0229800 (Os01g0229800) mRNA, complete cds Length = 912 Score = 513 bits (259), Expect = e-142 Identities = 409/459 (89%) Strand = Plus / Plus Query: 695 agctgaacagcatctggtaccagccggaggagatcttcccggccgccggcacgccggagg 754 |||| ||||||||||||| |||||| |||||||||||||| | | |||||| ||||||| Sbjct: 410 agctcaacagcatctggttccagcccgaggagatcttccccgtctccggcaagccggagc 469 Query: 755 agcgccagcacgccttctgggtccgcgtcaacaagcgctacttcgccctcgccgggaagc 814 ||||||| |||||||||||||||| ||||| | ||||||||| ||||||| | ||||| Sbjct: 470 agcgccaacacgccttctgggtccccgtcagctcccgctacttctccctcgctgagaagc 529 Query: 815 tggaggggatggagctaccggcgtgcgtgaacgcgacgacgtgcctgcctcgggcgccga 874 | |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 530 tagaggggatggagctgccggcgtgcgtgaacgcgacgacgtgcctgccgcgggcgccga 589 Query: 875 gggtgactcgggtgagcagggggtgcagcgccaacgtgttcctcgacaacgccgactacc 934 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 590 gggtgacgagggtgaggagggggtgcagcgccaacgtgttcctcgacaacgccgcctacc 649 Query: 935 gccagttcctgagctccaagttcgggtgcaccccggtggagatggagagcgccgccgtcg 994 | ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 650 gtcagttcctgcgggccaagttcgggtgcacgccggtggagatggagagcgccgccgtgg 709 Query: 995 cgctcgtttcgcaccagctcggcgtccccttcctcaccatccgctcgctctccgacctcg 1054 ||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||||| Sbjct: 710 cgctcgtggcgcaccagcacgccgtcccgttcctcaccatccgctccctctccgacctcg 769 Query: 1055 ccggcggaggctcggcgctcggcaacgaggccagcacgttcctcagcatcgccgcgcaga 1114 | ||||| ||||| ||||||||||||||||| || ||||||| ||||||||| |||| Sbjct: 770 ctggcggcggctcctcgctcggcaacgaggccggcgagttcctcgccatcgccgcccaga 829 Query: 1115 acgccgtggatgtcatgctcaaattcgtgccgctcctcg 1153 ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 830 acgccgtcgacgtcatgctcaacttcgtcccgctcctcg 868 Score = 387 bits (195), Expect = e-104 Identities = 297/331 (89%) Strand = Plus / Plus Query: 324 ctcctacctggacgtccaagggcgaaggtttcgcttcggaaccatcggagaccaacacgt 383 ||||||||| ||| ||||||| ||||||||||||||||| |||| || | |||| |||| Sbjct: 51 ctcctacctcgacatccaaggacgaaggtttcgcttcggtgccattgggggccaaaacgt 110 Query: 384 tgtcatggtcatgacagggctgagcatgctcaatgccgggctgaccacccagctgctgct 443 ||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct: 111 tgtcatggtcatgacagggcttagcatgctgaatgctgggctgacgacccagctgctgct 170 Query: 444 gagcctgttcctggtgaagggcgtcgtgcactggggcatcgccggcaacgccaacgagga 503 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 171 gagcctgttcagggtgaagggcatcgtgcactggggcatcgccggcaacgccgacgaggg 230 Query: 504 cctccagatcggcgacgtcaccatccccgagtactgggcccacgtgtccctctggaactg 563 ||||||||||||||||||||||||||| ||| ||||||| ||| | |||||||||||||| Sbjct: 231 cctccagatcggcgacgtcaccatcccggagcactgggcgcacctctccctctggaactg 290 Query: 564 gcagcggtacggcgacgggcaagagaacgagctgtcgctggaggccgccggcgactacac 623 |||||| ||||||||||| | |||||||||||| |||| |||||||||||||||||||| Sbjct: 291 gcagcgctacggcgacggcccggagaacgagctgccgctcgaggccgccggcgactacac 350 Query: 624 gcgggagtacggcttcctcaacttctccgac 654 || || |||||||||||||||||||||| Sbjct: 351 ccgcgacctcggcttcctcaacttctccgac 381 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 412 bits (208), Expect = e-111 Identities = 304/336 (90%) Strand = Plus / Minus Query: 818 aggggatggagctaccggcgtgcgtgaacgcgacgacgtgcctgcctcgggcgccgaggg 877 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 7184862 aggggatggagctgccggcgtgcgtgaacgcgacgacgtgcctgccgcgggcgccgaggg 7184803 Query: 878 tgactcgggtgagcagggggtgcagcgccaacgtgttcctcgacaacgccgactaccgcc 937 |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 7184802 tgacgagggtgaggagggggtgcagcgccaacgtgttcctcgacaacgccgcctaccgtc 7184743 Query: 938 agttcctgagctccaagttcgggtgcaccccggtggagatggagagcgccgccgtcgcgc 997 |||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 7184742 agttcctgcgggccaagttcgggtgcacgccggtggagatggagagcgccgccgtggcgc 7184683 Query: 998 tcgtttcgcaccagctcggcgtccccttcctcaccatccgctcgctctccgacctcgccg 1057 |||| ||||||||| || |||||| ||||||||||||||||| |||||||||||||| | Sbjct: 7184682 tcgtggcgcaccagcacgccgtcccgttcctcaccatccgctccctctccgacctcgctg 7184623 Query: 1058 gcggaggctcggcgctcggcaacgaggccagcacgttcctcagcatcgccgcgcagaacg 1117 |||| ||||| ||||||||||||||||| || ||||||| ||||||||| ||||||| Sbjct: 7184622 gcggcggctcctcgctcggcaacgaggccggcgagttcctcgccatcgccgcccagaacg 7184563 Query: 1118 ccgtggatgtcatgctcaaattcgtgccgctcctcg 1153 |||| || ||||||||||| ||||| |||||||||| Sbjct: 7184562 ccgtcgacgtcatgctcaacttcgtcccgctcctcg 7184527 Score = 293 bits (148), Expect = 9e-76 Identities = 217/240 (90%) Strand = Plus / Minus Query: 415 aatgccgggctgaccacccagctgctgctgagcctgttcctggtgaagggcgtcgtgcac 474 ||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 7185811 aatgctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcac 7185752 Query: 475 tggggcatcgccggcaacgccaacgaggacctccagatcggcgacgtcaccatccccgag 534 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| Sbjct: 7185751 tggggcatcgccggcaacgccgacgagggcctccagatcggcgacgtcaccatcccggag 7185692 Query: 535 tactgggcccacgtgtccctctggaactggcagcggtacggcgacgggcaagagaacgag 594 ||||||| ||| | |||||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 7185691 cactgggcgcacctctccctctggaactggcagcgctacggcgacggcccggagaacgag 7185632 Query: 595 ctgtcgctggaggccgccggcgactacacgcgggagtacggcttcctcaacttctccgac 654 ||| |||| |||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 7185631 ctgccgctcgaggccgccggcgactacacccgcgacctcggcttcctcaacttctccgac 7185572 Score = 107 bits (54), Expect = 1e-19 Identities = 108/126 (85%) Strand = Plus / Minus Query: 695 agctgaacagcatctggtaccagccggaggagatcttcccggccgccggcacgccggagg 754 |||| ||||||||||||| |||||| |||||||||||||| | | |||||| ||||||| Sbjct: 7185543 agctcaacagcatctggttccagcccgaggagatcttccccgtctccggcaagccggagc 7185484 Query: 755 agcgccagcacgccttctgggtccgcgtcaacaagcgctacttcgccctcgccgggaagc 814 ||||||| |||||||||||||||| ||||| | ||||||||| ||||||| | ||||| Sbjct: 7185483 agcgccaacacgccttctgggtccccgtcagctcccgctacttctccctcgctgagaagc 7185424 Query: 815 tggagg 820 | |||| Sbjct: 7185423 tagagg 7185418 Score = 107 bits (54), Expect = 1e-19 Identities = 123/144 (85%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 167 tgatggccacggcaacggaggggttcatctcgaagaagacgtggctcgccatccgccggg 226 ||||||| ||||| ||||||||||||||||| |||||||||| ||| |||| |||| Sbjct: 7187150 tgatggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcggg 7187091 Query: 227 cgaac---cgcgacggcccgttcgtcgggctcgtcgtgcccaacgcctacgagatggacc 283 ||||| || | ||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 7187090 cgaacgaccgtggcgggccgttcgt-gggctcgtcgtgcccaacgcctacgagatggatc 7187032 Query: 284 ccgttctcaactcacccagcttca 307 |||| |||||||| || ||||||| Sbjct: 7187031 ccgtcctcaactccccaagcttca 7187008 >dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 412 bits (208), Expect = e-111 Identities = 304/336 (90%) Strand = Plus / Minus Query: 818 aggggatggagctaccggcgtgcgtgaacgcgacgacgtgcctgcctcgggcgccgaggg 877 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 79510 aggggatggagctgccggcgtgcgtgaacgcgacgacgtgcctgccgcgggcgccgaggg 79451 Query: 878 tgactcgggtgagcagggggtgcagcgccaacgtgttcctcgacaacgccgactaccgcc 937 |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 79450 tgacgagggtgaggagggggtgcagcgccaacgtgttcctcgacaacgccgcctaccgtc 79391 Query: 938 agttcctgagctccaagttcgggtgcaccccggtggagatggagagcgccgccgtcgcgc 997 |||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 79390 agttcctgcgggccaagttcgggtgcacgccggtggagatggagagcgccgccgtggcgc 79331 Query: 998 tcgtttcgcaccagctcggcgtccccttcctcaccatccgctcgctctccgacctcgccg 1057 |||| ||||||||| || |||||| ||||||||||||||||| |||||||||||||| | Sbjct: 79330 tcgtggcgcaccagcacgccgtcccgttcctcaccatccgctccctctccgacctcgctg 79271 Query: 1058 gcggaggctcggcgctcggcaacgaggccagcacgttcctcagcatcgccgcgcagaacg 1117 |||| ||||| ||||||||||||||||| || ||||||| ||||||||| ||||||| Sbjct: 79270 gcggcggctcctcgctcggcaacgaggccggcgagttcctcgccatcgccgcccagaacg 79211 Query: 1118 ccgtggatgtcatgctcaaattcgtgccgctcctcg 1153 |||| || ||||||||||| ||||| |||||||||| Sbjct: 79210 ccgtcgacgtcatgctcaacttcgtcccgctcctcg 79175 Score = 293 bits (148), Expect = 9e-76 Identities = 217/240 (90%) Strand = Plus / Minus Query: 415 aatgccgggctgaccacccagctgctgctgagcctgttcctggtgaagggcgtcgtgcac 474 ||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 80459 aatgctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcac 80400 Query: 475 tggggcatcgccggcaacgccaacgaggacctccagatcggcgacgtcaccatccccgag 534 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| Sbjct: 80399 tggggcatcgccggcaacgccgacgagggcctccagatcggcgacgtcaccatcccggag 80340 Query: 535 tactgggcccacgtgtccctctggaactggcagcggtacggcgacgggcaagagaacgag 594 ||||||| ||| | |||||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 80339 cactgggcgcacctctccctctggaactggcagcgctacggcgacggcccggagaacgag 80280 Query: 595 ctgtcgctggaggccgccggcgactacacgcgggagtacggcttcctcaacttctccgac 654 ||| |||| |||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 80279 ctgccgctcgaggccgccggcgactacacccgcgacctcggcttcctcaacttctccgac 80220 Score = 107 bits (54), Expect = 1e-19 Identities = 108/126 (85%) Strand = Plus / Minus Query: 695 agctgaacagcatctggtaccagccggaggagatcttcccggccgccggcacgccggagg 754 |||| ||||||||||||| |||||| |||||||||||||| | | |||||| ||||||| Sbjct: 80191 agctcaacagcatctggttccagcccgaggagatcttccccgtctccggcaagccggagc 80132 Query: 755 agcgccagcacgccttctgggtccgcgtcaacaagcgctacttcgccctcgccgggaagc 814 ||||||| |||||||||||||||| ||||| | ||||||||| ||||||| | ||||| Sbjct: 80131 agcgccaacacgccttctgggtccccgtcagctcccgctacttctccctcgctgagaagc 80072 Query: 815 tggagg 820 | |||| Sbjct: 80071 tagagg 80066 Score = 107 bits (54), Expect = 1e-19 Identities = 123/144 (85%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 167 tgatggccacggcaacggaggggttcatctcgaagaagacgtggctcgccatccgccggg 226 ||||||| ||||| ||||||||||||||||| |||||||||| ||| |||| |||| Sbjct: 81798 tgatggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcggg 81739 Query: 227 cgaac---cgcgacggcccgttcgtcgggctcgtcgtgcccaacgcctacgagatggacc 283 ||||| || | ||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 81738 cgaacgaccgtggcgggccgttcgt-gggctcgtcgtgcccaacgcctacgagatggatc 81680 Query: 284 ccgttctcaactcacccagcttca 307 |||| |||||||| || ||||||| Sbjct: 81679 ccgtcctcaactccccaagcttca 81656 >gb|AY108102.1| Zea mays PCO073188 mRNA sequence Length = 408 Score = 143 bits (72), Expect = 2e-30 Identities = 123/140 (87%) Strand = Plus / Plus Query: 157 gcggtggtgctgatggccacggcaacggaggggttcatctcgaagaagacgtggctcgcc 216 ||||||||||| ||||| ||||| ||||||| |||||||| |||||||||||| |||| Sbjct: 167 gcggtggtgctcatggcaacggcgtcggagggcttcatctccaagaagacgtggagcgcc 226 Query: 217 atccgccgggcgaaccgcgacggcccgttcgtcgggctcgtcgtgcccaacgcctacgag 276 ||||| |||||| |||||||||| || ||||| ||||| || |||||||||||||||||| Sbjct: 227 atccggcgggcggaccgcgacgggcccttcgtggggctggtggtgcccaacgcctacgag 286 Query: 277 atggaccccgttctcaactc 296 |||| |||||| |||||||| Sbjct: 287 atggtccccgtcctcaactc 306