BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf034g20 (1007 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835099.1| Oryza sativa (indica cultivar-group) cDNA clone:... 658 0.0 ref|NM_001057572.1| Oryza sativa (japonica cultivar-group) Os03g... 656 0.0 gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 428 e-116 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 428 e-116 gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 428 e-116 >emb|CT835099.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018J14, full insert sequence Length = 1097 Score = 658 bits (332), Expect = 0.0 Identities = 498/552 (90%), Gaps = 6/552 (1%) Strand = Plus / Plus Query: 227 cggactcgacggattgggtcgcgtcgtcgctgacgcggcgattcgggatcggggccgggc 286 ||||||||||||| ||||| ||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 281 cggactcgacggactgggtggcgacgtcgctgacgcggcggttcggcatcggcgccgggc 340 Query: 287 tggcgtgggtggggttcctggccgtcggcgtcgtgtcggagcagctcaagacgcgcttcg 346 | |||||||| |||||||| ||| |||||||||| || |||||||||||||| ||||||| Sbjct: 341 tcgcgtgggtcgggttcctcgccttcggcgtcgtctccgagcagctcaagacccgcttcg 400 Query: 347 aggtcgcgcagcagcaggccaacaccaaggatgtggagcaagagcaggaggtcgttctgc 406 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 401 aggtcgcgcagcagctggccaacaccaaggacgtggagcaagagcaggaggtcgtccttc 460 Query: 407 ccaatggaattcggtactacgagatgcgagcgggcggcggcgacgtcccgcggcctgggg 466 |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 461 ccaacggaatacggtactacgagatgcgagtaggcggcggcgacgtgccgcggccggggg 520 Query: 467 acctggtggtgatcgacctgcaggggcgggtggccggcggcggcgaggcgttcgtggaca 526 |||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||| Sbjct: 521 acctggtggtgatcgacctgaaggggagggtgac---cggcggcgaggcgttcgtggaca 577 Query: 527 cgtttggcgacgggaagcggccgctggcgctgttgatgggctccaggccgtacaccaggg 586 |||| ||||||||||||||||||||||||||| ||||||| || ||||||||||| |||| Sbjct: 578 cgttcggcgacgggaagcggccgctggcgctggtgatggggtcgaggccgtacacgaggg 637 Query: 587 ggatgtgcgagggcatcgagtacgtgctgcggtccatgaaggccggcggcaagcggcggg 646 | ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 638 gaatgtgcgagggggtggagtacgtgctgcggtccatgagggccggcggcaagcggcggg 697 Query: 647 tggtcgtccagccgagcctcggcttcggcgacgacggcgccgactttggaga---cgacg 703 ||||||||| |||| ||||||||||||||||||||||||||||| || || || || Sbjct: 698 tggtcgtcccgccggcgctcggcttcggcgacgacggcgccgacttcggcgacgccgccg 757 Query: 704 cgcaggtgcctcccggggcaacgctggagtacgtcgtggaggtcgacaaggtgtccatcg 763 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 758 cgcaggtcccgcccggggccacgctcgagtacgtcgtggaggtcgacaaggtgtccatcg 817 Query: 764 cgccgtcgtgag 775 ||||| |||||| Sbjct: 818 cgccggcgtgag 829 Score = 139 bits (70), Expect = 2e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 45 caccgccatggccaccttcttgggaagctccccggccttcctcgcccgccccgtcgcc-- 102 ||||||||||||||||||| | || ||||| ||||||||||||||||||||||||||| Sbjct: 63 caccgccatggccaccttccttgggagctcgccggccttcctcgcccgccccgtcgccgc 122 Query: 103 -aagccgcacctctcgtgcgcgcagtcctcgcgcccgcccagcgcccagcagccgc 157 |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 123 caagccgcacctctcctgcgcgcagtcgccgcgcccgcccagcgcccagccgccgc 178 >ref|NM_001057572.1| Oryza sativa (japonica cultivar-group) Os03g0708500 (Os03g0708500) mRNA, complete cds Length = 759 Score = 656 bits (331), Expect = 0.0 Identities = 497/551 (90%), Gaps = 6/551 (1%) Strand = Plus / Plus Query: 227 cggactcgacggattgggtcgcgtcgtcgctgacgcggcgattcgggatcggggccgggc 286 ||||||||||||| ||||| ||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 212 cggactcgacggactgggtggcgacgtcgctgacgcggcggttcggcatcggcgccgggc 271 Query: 287 tggcgtgggtggggttcctggccgtcggcgtcgtgtcggagcagctcaagacgcgcttcg 346 | |||||||| |||||||| ||| |||||||||| || |||||||||||||| ||||||| Sbjct: 272 tcgcgtgggtcgggttcctcgccttcggcgtcgtctccgagcagctcaagacccgcttcg 331 Query: 347 aggtcgcgcagcagcaggccaacaccaaggatgtggagcaagagcaggaggtcgttctgc 406 ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 332 aggtcgcgcagcagctggccaacaccaaggacgtggagcaagagcaggaggtcgtccttc 391 Query: 407 ccaatggaattcggtactacgagatgcgagcgggcggcggcgacgtcccgcggcctgggg 466 |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 392 ccaacggaatacggtactacgagatgcgagtaggcggcggcgacgtgccgcggccggggg 451 Query: 467 acctggtggtgatcgacctgcaggggcgggtggccggcggcggcgaggcgttcgtggaca 526 |||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||| Sbjct: 452 acctggtggtgatcgacctgaaggggagggtgac---cggcggcgaggcgttcgtggaca 508 Query: 527 cgtttggcgacgggaagcggccgctggcgctgttgatgggctccaggccgtacaccaggg 586 |||| ||||||||||||||||||||||||||| ||||||| || ||||||||||| |||| Sbjct: 509 cgttcggcgacgggaagcggccgctggcgctggtgatggggtcgaggccgtacacgaggg 568 Query: 587 ggatgtgcgagggcatcgagtacgtgctgcggtccatgaaggccggcggcaagcggcggg 646 | ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 569 gaatgtgcgagggggtggagtacgtgctgcggtccatgagggccggcggcaagcggcggg 628 Query: 647 tggtcgtccagccgagcctcggcttcggcgacgacggcgccgactttggaga---cgacg 703 ||||||||| |||| ||||||||||||||||||||||||||||| || || || || Sbjct: 629 tggtcgtcccgccggcgctcggcttcggcgacgacggcgccgacttcggcgacgccgccg 688 Query: 704 cgcaggtgcctcccggggcaacgctggagtacgtcgtggaggtcgacaaggtgtccatcg 763 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 689 cgcaggtcccgcccggggccacgctcgagtacgtcgtggaggtcgacaaggtgtccatcg 748 Query: 764 cgccgtcgtga 774 ||||| ||||| Sbjct: 749 cgccggcgtga 759 Score = 125 bits (63), Expect = 4e-25 Identities = 98/109 (89%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 52 atggccaccttcttgggaagctccccggccttcctcgcccgccccgtcgcc---aagccg 108 |||||||||||| | || ||||| ||||||||||||||||||||||||||| |||||| Sbjct: 1 atggccaccttccttgggagctcgccggccttcctcgcccgccccgtcgccgccaagccg 60 Query: 109 cacctctcgtgcgcgcagtcctcgcgcccgcccagcgcccagcagccgc 157 |||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 61 cacctctcctgcgcgcagtcgccgcgcccgcccagcgcccagccgccgc 109 >gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 428 bits (216), Expect = e-116 Identities = 325/360 (90%), Gaps = 6/360 (1%) Strand = Plus / Plus Query: 419 ggtactacgagatgcgagcgggcggcggcgacgtcccgcggcctggggacctggtggtga 478 |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 141865 ggtactacgagatgcgagtaggcggcggcgacgtgccgcggccgggggacctggtggtga 141924 Query: 479 tcgacctgcaggggcgggtggccggcggcggcgaggcgttcgtggacacgtttggcgacg 538 |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 141925 tcgacctgaaggggagggtgaccggc---ggcgaggcgttcgtggacacgttcggcgacg 141981 Query: 539 ggaagcggccgctggcgctgttgatgggctccaggccgtacaccagggggatgtgcgagg 598 |||||||||||||||||||| ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 141982 ggaagcggccgctggcgctggtgatggggtcgaggccgtacacgaggggaatgtgcgagg 142041 Query: 599 gcatcgagtacgtgctgcggtccatgaaggccggcggcaagcggcgggtggtcgtccagc 658 | | |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 142042 gggtggagtacgtgctgcggtccatgagggccggcggcaagcggcgggtggtcgtcccgc 142101 Query: 659 cgagcctcggcttcggcgacgacggcgccgactttggaga---cgacgcgcaggtgcctc 715 || ||||||||||||||||||||||||||||| || || || ||||||||| || | Sbjct: 142102 cggcgctcggcttcggcgacgacggcgccgacttcggcgacgccgccgcgcaggtcccgc 142161 Query: 716 ccggggcaacgctggagtacgtcgtggaggtcgacaaggtgtccatcgcgccgtcgtgag 775 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142162 ccggggccacgctcgagtacgtcgtggaggtcgacaaggtgtccatcgcgccggcgtgag 142221 Score = 184 bits (93), Expect = 5e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 227 cggactcgacggattgggtcgcgtcgtcgctgacgcggcgattcgggatcggggccgggc 286 ||||||||||||| ||||| ||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 141492 cggactcgacggactgggtggcgacgtcgctgacgcggcggttcggcatcggcgccgggc 141551 Query: 287 tggcgtgggtggggttcctggccgtcggcgtcgtgtcggagcagctcaagacgcgcttcg 346 | |||||||| |||||||| ||| |||||||||| || |||||||||||||| ||||||| Sbjct: 141552 tcgcgtgggtcgggttcctcgccttcggcgtcgtctccgagcagctcaagacccgcttcg 141611 Query: 347 aggtcgcgcagcagcaggccaacaccaag 375 ||||||||||||||| ||||||||||||| Sbjct: 141612 aggtcgcgcagcagctggccaacaccaag 141640 Score = 139 bits (70), Expect = 2e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 45 caccgccatggccaccttcttgggaagctccccggccttcctcgcccgccccgtcgcc-- 102 ||||||||||||||||||| | || ||||| ||||||||||||||||||||||||||| Sbjct: 141274 caccgccatggccaccttccttgggagctcgccggccttcctcgcccgccccgtcgccgc 141333 Query: 103 -aagccgcacctctcgtgcgcgcagtcctcgcgcccgcccagcgcccagcagccgc 157 |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 141334 caagccgcacctctcctgcgcgcagtcgccgcgcccgcccagcgcccagccgccgc 141389 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 428 bits (216), Expect = e-116 Identities = 325/360 (90%), Gaps = 6/360 (1%) Strand = Plus / Minus Query: 419 ggtactacgagatgcgagcgggcggcggcgacgtcccgcggcctggggacctggtggtga 478 |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 28362501 ggtactacgagatgcgagtaggcggcggcgacgtgccgcggccgggggacctggtggtga 28362442 Query: 479 tcgacctgcaggggcgggtggccggcggcggcgaggcgttcgtggacacgtttggcgacg 538 |||||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 28362441 tcgacctgaaggggagggtgaccggcggcg---aggcgttcgtggacacgttcggcgacg 28362385 Query: 539 ggaagcggccgctggcgctgttgatgggctccaggccgtacaccagggggatgtgcgagg 598 |||||||||||||||||||| ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 28362384 ggaagcggccgctggcgctggtgatggggtcgaggccgtacacgaggggaatgtgcgagg 28362325 Query: 599 gcatcgagtacgtgctgcggtccatgaaggccggcggcaagcggcgggtggtcgtccagc 658 | | |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 28362324 gggtggagtacgtgctgcggtccatgagggccggcggcaagcggcgggtggtcgtcccgc 28362265 Query: 659 cgagcctcggcttcggcgacgacggcgccgactttggaga---cgacgcgcaggtgcctc 715 || ||||||||||||||||||||||||||||| || || || ||||||||| || | Sbjct: 28362264 cggcgctcggcttcggcgacgacggcgccgacttcggcgacgccgccgcgcaggtcccgc 28362205 Query: 716 ccggggcaacgctggagtacgtcgtggaggtcgacaaggtgtccatcgcgccgtcgtgag 775 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 28362204 ccggggccacgctcgagtacgtcgtggaggtcgacaaggtgtccatcgcgccggcgtgag 28362145 Score = 184 bits (93), Expect = 5e-43 Identities = 135/149 (90%) Strand = Plus / Minus Query: 227 cggactcgacggattgggtcgcgtcgtcgctgacgcggcgattcgggatcggggccgggc 286 ||||||||||||| ||||| ||| |||||||||||||||| ||||| ||||| ||||||| Sbjct: 28362874 cggactcgacggactgggtggcgacgtcgctgacgcggcggttcggcatcggcgccgggc 28362815 Query: 287 tggcgtgggtggggttcctggccgtcggcgtcgtgtcggagcagctcaagacgcgcttcg 346 | |||||||| |||||||| ||| |||||||||| || |||||||||||||| ||||||| Sbjct: 28362814 tcgcgtgggtcgggttcctcgccttcggcgtcgtctccgagcagctcaagacccgcttcg 28362755 Query: 347 aggtcgcgcagcagcaggccaacaccaag 375 ||||||||||||||| ||||||||||||| Sbjct: 28362754 aggtcgcgcagcagctggccaacaccaag 28362726 Score = 139 bits (70), Expect = 2e-29 Identities = 105/116 (90%), Gaps = 3/116 (2%) Strand = Plus / Minus Query: 45 caccgccatggccaccttcttgggaagctccccggccttcctcgcccgccccgtcgcc-- 102 ||||||||||||||||||| | || ||||| ||||||||||||||||||||||||||| Sbjct: 28363092 caccgccatggccaccttccttgggagctcgccggccttcctcgcccgccccgtcgccgc 28363033 Query: 103 -aagccgcacctctcgtgcgcgcagtcctcgcgcccgcccagcgcccagcagccgc 157 |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 28363032 caagccgcacctctcctgcgcgcagtcgccgcgcccgcccagcgcccagccgccgc 28362977 >gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 428 bits (216), Expect = e-116 Identities = 325/360 (90%), Gaps = 6/360 (1%) Strand = Plus / Minus Query: 419 ggtactacgagatgcgagcgggcggcggcgacgtcccgcggcctggggacctggtggtga 478 |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 122318 ggtactacgagatgcgagtaggcggcggcgacgtgccgcggccgggggacctggtggtga 122259 Query: 479 tcgacctgcaggggcgggtggccggcggcggcgaggcgttcgtggacacgtttggcgacg 538 |||||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 122258 tcgacctgaaggggagggtgaccggcggcg---aggcgttcgtggacacgttcggcgacg 122202 Query: 539 ggaagcggccgctggcgctgttgatgggctccaggccgtacaccagggggatgtgcgagg 598 |||||||||||||||||||| ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 122201 ggaagcggccgctggcgctggtgatggggtcgaggccgtacacgaggggaatgtgcgagg 122142 Query: 599 gcatcgagtacgtgctgcggtccatgaaggccggcggcaagcggcgggtggtcgtccagc 658 | | |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 122141 gggtggagtacgtgctgcggtccatgagggccggcggcaagcggcgggtggtcgtcccgc 122082 Query: 659 cgagcctcggcttcggcgacgacggcgccgactttggaga---cgacgcgcaggtgcctc 715 || ||||||||||||||||||||||||||||| || || || ||||||||| || | Sbjct: 122081 cggcgctcggcttcggcgacgacggcgccgacttcggcgacgccgccgcgcaggtcccgc 122022 Query: 716 ccggggcaacgctggagtacgtcgtggaggtcgacaaggtgtccatcgcgccgtcgtgag 775 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122021 ccggggccacgctcgagtacgtcgtggaggtcgacaaggtgtccatcgcgccggcgtgag 121962