BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033o01 (1088 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066702.1| Oryza sativa (japonica cultivar-group) Os07g... 339 1e-89 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 339 1e-89 dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 339 1e-89 dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic D... 339 1e-89 dbj|AK108488.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 3e-87 >ref|NM_001066702.1| Oryza sativa (japonica cultivar-group) Os07g0595700 (Os07g0595700) mRNA, complete cds Length = 1120 Score = 339 bits (171), Expect = 1e-89 Identities = 225/243 (92%) Strand = Plus / Plus Query: 482 gatggagagtggatatggggttgggggaggtgccgcgcggcggcgaggcgcgcgtgggcg 541 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 834 gatggggagtggctgtgggggtgggggaggtgccgcgcggcggcgaggcgagcgtgggcg 893 Query: 542 gccggggtcggggccgtgcgggagggtgtgctagtgcacggggcgtgcgggtgccccgcg 601 |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| Sbjct: 894 gccggggtcggggccgtgcgggaggggctgatggtgcacgggacgtgcgggtgccccgcg 953 Query: 602 gtgaggcccgccgtgtggtcggccgcggcggcggccgttgtgatgggggcgctgctgtac 661 ||||||||||||||||||||||| |||| |||||||||||| |||| |||||||| ||| Sbjct: 954 gtgaggcccgccgtgtggtcggcggcgggcgcggccgttgtggtgggagcgctgctctac 1013 Query: 662 gcgcgccggcgggacaggagggagagggacctgctcgtccttctctcgcaggagaaggat 721 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1014 gcgcgccggcgggacaggagggagagggacctgctcgtgctgctctcgcaggagaaggat 1073 Query: 722 aag 724 ||| Sbjct: 1074 aag 1076 Score = 168 bits (85), Expect = 3e-38 Identities = 147/167 (88%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 158 ccggcctccccgtactccgcgctccacccgctcctcctcccctcccccaacccgcatctc 217 ||||| || |||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 474 ccggcatcgccgtactcggcgctccacccgctgctcctcccctcccctaacccgcacctc 533 Query: 218 ctcctcaagcccaagacgttgaccctctcgctctcctcctcctccctcgcgtccatgctc 277 |||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| Sbjct: 534 ctcctcaagcccaagacgctgaccctctcgctctcctcgtcatccctcggctcgatgccg 593 Query: 278 tcctcctccccgcctgcccccgc---ccccgacgcctgggagctcgt 321 || ||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 594 tcttcctccccgcctggccccgccgtcaccgacgcctgggagctcgt 640 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 362 gacggcggcctggacgactgcgccatcttcccgccgcgcctccacgagggcctgggcctg 421 ||||||||||| |||||||||| | ||||||| ||||||||||||||||| || ||| | Sbjct: 687 gacggcggcctcgacgactgcgacgtcttccccccgcgcctccacgaggggctcggcgtc 746 Query: 422 gagggggaggctgaggaggcagcggcgaaggaggcggaggaggacg 467 ||||||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 747 gagggggaggcggaggaggctgcggcgaaggaaggggaggaagacg 792 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 339 bits (171), Expect = 1e-89 Identities = 225/243 (92%) Strand = Plus / Minus Query: 482 gatggagagtggatatggggttgggggaggtgccgcgcggcggcgaggcgcgcgtgggcg 541 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 24188956 gatggggagtggctgtgggggtgggggaggtgccgcgcggcggcgaggcgagcgtgggcg 24188897 Query: 542 gccggggtcggggccgtgcgggagggtgtgctagtgcacggggcgtgcgggtgccccgcg 601 |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| Sbjct: 24188896 gccggggtcggggccgtgcgggaggggctgatggtgcacgggacgtgcgggtgccccgcg 24188837 Query: 602 gtgaggcccgccgtgtggtcggccgcggcggcggccgttgtgatgggggcgctgctgtac 661 ||||||||||||||||||||||| |||| |||||||||||| |||| |||||||| ||| Sbjct: 24188836 gtgaggcccgccgtgtggtcggcggcgggcgcggccgttgtggtgggagcgctgctctac 24188777 Query: 662 gcgcgccggcgggacaggagggagagggacctgctcgtccttctctcgcaggagaaggat 721 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 24188776 gcgcgccggcgggacaggagggagagggacctgctcgtgctgctctcgcaggagaaggat 24188717 Query: 722 aag 724 ||| Sbjct: 24188716 aag 24188714 Score = 168 bits (85), Expect = 3e-38 Identities = 147/167 (88%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 158 ccggcctccccgtactccgcgctccacccgctcctcctcccctcccccaacccgcatctc 217 ||||| || |||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 24189316 ccggcatcgccgtactcggcgctccacccgctgctcctcccctcccctaacccgcacctc 24189257 Query: 218 ctcctcaagcccaagacgttgaccctctcgctctcctcctcctccctcgcgtccatgctc 277 |||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| Sbjct: 24189256 ctcctcaagcccaagacgctgaccctctcgctctcctcgtcatccctcggctcgatgccg 24189197 Query: 278 tcctcctccccgcctgcccccgc---ccccgacgcctgggagctcgt 321 || ||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 24189196 tcttcctccccgcctggccccgccgtcaccgacgcctgggagctcgt 24189150 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 362 gacggcggcctggacgactgcgccatcttcccgccgcgcctccacgagggcctgggcctg 421 ||||||||||| |||||||||| | ||||||| ||||||||||||||||| || ||| | Sbjct: 24189103 gacggcggcctcgacgactgcgacgtcttccccccgcgcctccacgaggggctcggcgtc 24189044 Query: 422 gagggggaggctgaggaggcagcggcgaaggaggcggaggaggacg 467 ||||||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 24189043 gagggggaggcggaggaggctgcggcgaaggaaggggaggaagacg 24188998 >dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 339 bits (171), Expect = 1e-89 Identities = 225/243 (92%) Strand = Plus / Minus Query: 482 gatggagagtggatatggggttgggggaggtgccgcgcggcggcgaggcgcgcgtgggcg 541 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 507 gatggggagtggctgtgggggtgggggaggtgccgcgcggcggcgaggcgagcgtgggcg 448 Query: 542 gccggggtcggggccgtgcgggagggtgtgctagtgcacggggcgtgcgggtgccccgcg 601 |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| Sbjct: 447 gccggggtcggggccgtgcgggaggggctgatggtgcacgggacgtgcgggtgccccgcg 388 Query: 602 gtgaggcccgccgtgtggtcggccgcggcggcggccgttgtgatgggggcgctgctgtac 661 ||||||||||||||||||||||| |||| |||||||||||| |||| |||||||| ||| Sbjct: 387 gtgaggcccgccgtgtggtcggcggcgggcgcggccgttgtggtgggagcgctgctctac 328 Query: 662 gcgcgccggcgggacaggagggagagggacctgctcgtccttctctcgcaggagaaggat 721 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 327 gcgcgccggcgggacaggagggagagggacctgctcgtgctgctctcgcaggagaaggat 268 Query: 722 aag 724 ||| Sbjct: 267 aag 265 Score = 168 bits (85), Expect = 3e-38 Identities = 147/167 (88%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 158 ccggcctccccgtactccgcgctccacccgctcctcctcccctcccccaacccgcatctc 217 ||||| || |||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 867 ccggcatcgccgtactcggcgctccacccgctgctcctcccctcccctaacccgcacctc 808 Query: 218 ctcctcaagcccaagacgttgaccctctcgctctcctcctcctccctcgcgtccatgctc 277 |||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| Sbjct: 807 ctcctcaagcccaagacgctgaccctctcgctctcctcgtcatccctcggctcgatgccg 748 Query: 278 tcctcctccccgcctgcccccgc---ccccgacgcctgggagctcgt 321 || ||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 747 tcttcctccccgcctggccccgccgtcaccgacgcctgggagctcgt 701 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 362 gacggcggcctggacgactgcgccatcttcccgccgcgcctccacgagggcctgggcctg 421 ||||||||||| |||||||||| | ||||||| ||||||||||||||||| || ||| | Sbjct: 654 gacggcggcctcgacgactgcgacgtcttccccccgcgcctccacgaggggctcggcgtc 595 Query: 422 gagggggaggctgaggaggcagcggcgaaggaggcggaggaggacg 467 ||||||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 594 gagggggaggcggaggaggctgcggcgaaggaaggggaggaagacg 549 >dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 339 bits (171), Expect = 1e-89 Identities = 225/243 (92%) Strand = Plus / Minus Query: 482 gatggagagtggatatggggttgggggaggtgccgcgcggcggcgaggcgcgcgtgggcg 541 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 122371 gatggggagtggctgtgggggtgggggaggtgccgcgcggcggcgaggcgagcgtgggcg 122312 Query: 542 gccggggtcggggccgtgcgggagggtgtgctagtgcacggggcgtgcgggtgccccgcg 601 |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| Sbjct: 122311 gccggggtcggggccgtgcgggaggggctgatggtgcacgggacgtgcgggtgccccgcg 122252 Query: 602 gtgaggcccgccgtgtggtcggccgcggcggcggccgttgtgatgggggcgctgctgtac 661 ||||||||||||||||||||||| |||| |||||||||||| |||| |||||||| ||| Sbjct: 122251 gtgaggcccgccgtgtggtcggcggcgggcgcggccgttgtggtgggagcgctgctctac 122192 Query: 662 gcgcgccggcgggacaggagggagagggacctgctcgtccttctctcgcaggagaaggat 721 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 122191 gcgcgccggcgggacaggagggagagggacctgctcgtgctgctctcgcaggagaaggat 122132 Query: 722 aag 724 ||| Sbjct: 122131 aag 122129 Score = 168 bits (85), Expect = 3e-38 Identities = 147/167 (88%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 158 ccggcctccccgtactccgcgctccacccgctcctcctcccctcccccaacccgcatctc 217 ||||| || |||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 122731 ccggcatcgccgtactcggcgctccacccgctgctcctcccctcccctaacccgcacctc 122672 Query: 218 ctcctcaagcccaagacgttgaccctctcgctctcctcctcctccctcgcgtccatgctc 277 |||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| Sbjct: 122671 ctcctcaagcccaagacgctgaccctctcgctctcctcgtcatccctcggctcgatgccg 122612 Query: 278 tcctcctccccgcctgcccccgc---ccccgacgcctgggagctcgt 321 || ||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 122611 tcttcctccccgcctggccccgccgtcaccgacgcctgggagctcgt 122565 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 362 gacggcggcctggacgactgcgccatcttcccgccgcgcctccacgagggcctgggcctg 421 ||||||||||| |||||||||| | ||||||| ||||||||||||||||| || ||| | Sbjct: 122518 gacggcggcctcgacgactgcgacgtcttccccccgcgcctccacgaggggctcggcgtc 122459 Query: 422 gagggggaggctgaggaggcagcggcgaaggaggcggaggaggacg 467 ||||||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 122458 gagggggaggcggaggaggctgcggcgaaggaaggggaggaagacg 122413 >dbj|AK108488.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-F11, full insert sequence Length = 1120 Score = 331 bits (167), Expect = 3e-87 Identities = 224/243 (92%) Strand = Plus / Plus Query: 482 gatggagagtggatatggggttgggggaggtgccgcgcggcggcgaggcgcgcgtgggcg 541 ||||| |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 834 gatggggagtggctgtgggggtgggggaggtgccgcgcggcggcgaggcgagcgtgggcg 893 Query: 542 gccggggtcggggccgtgcgggagggtgtgctagtgcacggggcgtgcgggtgccccgcg 601 |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| Sbjct: 894 gccggggtcggggccgtgcgggaggggctgatggtgcacgggacgtgcgggtgccccgcg 953 Query: 602 gtgaggcccgccgtgtggtcggccgcggcggcggccgttgtgatgggggcgctgctgtac 661 ||||||||||||||||||||||| |||| |||||||||||| |||| |||||||| ||| Sbjct: 954 gtgaggcccgccgtgtggtcggcggcgggcgcggccgttgtggtgggagcgctgctctac 1013 Query: 662 gcgcgccggcgggacaggagggagagggacctgctcgtccttctctcgcaggagaaggat 721 |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| Sbjct: 1014 gcgcgccggcgggacaggagggagagggacctgctcgtgctgctctcgcgggagaaggat 1073 Query: 722 aag 724 ||| Sbjct: 1074 aag 1076 Score = 161 bits (81), Expect = 7e-36 Identities = 146/167 (87%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 158 ccggcctccccgtactccgcgctccacccgctcctcctcccctcccccaacccgcatctc 217 ||||| || |||||||| |||||||||||||| ||||||| |||||| |||||||| ||| Sbjct: 474 ccggcatcgccgtactcggcgctccacccgctgctcctcctctcccctaacccgcacctc 533 Query: 218 ctcctcaagcccaagacgttgaccctctcgctctcctcctcctccctcgcgtccatgctc 277 |||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| Sbjct: 534 ctcctcaagcccaagacgctgaccctctcgctctcctcgtcatccctcggctcgatgccg 593 Query: 278 tcctcctccccgcctgcccccgc---ccccgacgcctgggagctcgt 321 || ||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 594 tcttcctccccgcctggccccgccgtcaccgacgcctgggagctcgt 640 Score = 107 bits (54), Expect = 9e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 362 gacggcggcctggacgactgcgccatcttcccgccgcgcctccacgagggcctgggcctg 421 ||||||||||| |||||||||| | ||||||| ||||||||||||||||| || ||| | Sbjct: 687 gacggcggcctcgacgactgcgacgtcttccccccgcgcctccacgaggggctcggcgtc 746 Query: 422 gagggggaggctgaggaggcagcggcgaaggaggcggaggaggacg 467 ||||||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 747 gagggggaggcggaggaggctgcggcgaaggaaggggaggaagacg 792