BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033m02 (996 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072232.1| Oryza sativa (japonica cultivar-group) Os11g... 500 e-138 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 133 2e-27 emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 133 2e-27 emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 133 2e-27 gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome... 125 4e-25 >ref|NM_001072232.1| Oryza sativa (japonica cultivar-group) Os11g0138600 (Os11g0138600) mRNA, complete cds Length = 675 Score = 500 bits (252), Expect = e-138 Identities = 525/616 (85%) Strand = Plus / Plus Query: 57 acttcgcggagttggtggtggtgcggcatggagagacgtcggggaacgcctcccgtatca 116 ||||||| ||| | ||||||||||| ||||| ||||| |||| |||||||| | |||| Sbjct: 47 acttcgccgaggttgtggtggtgcgccatggggagacatcggcgaacgccttgtgcatca 106 Query: 117 ttcagggacagatggatgtagagctaaatgagactggtagacagcaagctgttatggttg 176 |||||||||| | |||| ||||| | |||||| |||| |||||||||||||||||||||| Sbjct: 107 ttcagggacaaacggatatagagttgaatgaggctggcagacagcaagctgttatggttg 166 Query: 177 cccgtcggctgtctaaagaagccaagccagctgctgtgtactcctctgatttgaagcgtg 236 | |||||| || |||||||||| ||||||| ||| ||||||||||||||| ||||||||| Sbjct: 167 ctcgtcggttggctaaagaagctaagccagttgccgtgtactcctctgatctgaagcgtg 226 Query: 237 ctgccgagactgcacgaactatagcaacagcctgcgacgtatccaatctggtgttggatc 296 ||||||| || || | ||||||||| ||||| ||| | || ||||| ||||||||| || Sbjct: 227 ctgccgaaacggctcaaactatagctacagcttgcaatgtgtccaacctggtgttgagtc 286 Query: 297 cagcactgagagaaaggcacatgggagatctacacggcttgaagtttgatgatgccgtga 356 | ||||||||||||||||||||||||||||| || || ||||||||||| |||||||| | Sbjct: 287 ctgcactgagagaaaggcacatgggagatctccatggtttgaagtttgaagatgccgtca 346 Query: 357 gtagcaagcttgaggcgttcaaggctttctcatctgatgagaggaaccaagaaatccccg 416 | ||||||| ||| || | |||||||||||||||||| || || | |||||||||||| | Sbjct: 347 gaagcaagcctgacgcttacaaggctttctcatctgaagacagaagccaagaaatccctg 406 Query: 417 gtggtggggagagtcttgatcaactatctgcacggtgtgtttcgtacttggacacaatag 476 |||| |||||||| ||||| |||||||||| |||||||||||||||||| ||||||||| Sbjct: 407 gtggcggggagagccttgaccaactatctgagcggtgtgtttcgtacttgaacacaatag 466 Query: 477 ctaggaaacacaagggggaacgggtgattgtggtctcccattttgcaagcatagaggaac 536 || |||| ||||||||||| || |||||||||||||||||| || ||||| ||||||| Sbjct: 467 ctgggaagcacaagggggagcgagtgattgtggtctcccatggagcgagcatcgaggaac 526 Query: 537 tgtgcaggcatgccgatccaaccaactcaactcgcaggagaattcccaacacttcgatca 596 | ||||| || ||||||||||||| |||| |||||||||||| || |||||||||||| Sbjct: 527 tctgcagacacgccgatccaaccagctcagttcgcaggagaatcccaaacacttcgatct 586 Query: 597 gtgttctccatatttctggcgccaacggccagtggatcctcgagaggttaggagacgtta 656 | || || | ||||||||| ||| |||||| ||||| ||||||||||| ||||| || Sbjct: 587 gcgtcttcaacatttctggctccaccggccattggattctcgagaggtttggagatgtcg 646 Query: 657 gccatctcaacgaaga 672 ||||||||||||||| Sbjct: 647 cccatctcaacgaaga 662 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 133 bits (67), Expect = 2e-27 Identities = 115/131 (87%) Strand = Plus / Minus Query: 284 ctggtgttggatccagcactgagagaaaggcacatgggagatctacacggcttgaagttt 343 ||||||||| ||| ||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 1727585 ctggtgttgagtcctgcactgagagaaaggcacatgggagatctccatggtttgaagttt 1727526 Query: 344 gatgatgccgtgagtagcaagcttgaggcgttcaaggctttctcatctgatgagaggaac 403 ||||||||||| || ||||||| ||| || | |||||||||||||||||| || || | | Sbjct: 1727525 gatgatgccgtcagaagcaagcctgacgcttacaaggctttctcatctgaagacagaagc 1727466 Query: 404 caagaaatccc 414 ||||||||||| Sbjct: 1727465 caagaaatccc 1727455 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Minus Query: 491 ggggaacgggtgattgtggtctcccattttgcaagcatagaggaactgtgcaggcatgcc 550 ||||| || |||||||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 1727050 ggggagcgagtgattgtggtctcccatggagcgagcatcgaggaactctgcagacacgcc 1726991 Query: 551 gatccaaccaactcaactcgcaggagaattcccaacacttcgatcagtgttctccatatt 610 |||||||||| |||| |||||||||||| || |||||||||||| | || || | ||| Sbjct: 1726990 gatccaaccagctcagttcgcaggagaatcccaaacacttcgatctgcgtcttcaacatt 1726931 Query: 611 tctggcgccaacggccagtggatcctcgagaggttaggagacgttagccatctcaacgaa 670 |||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 1726930 tctggctccaccggccattggattctcgagaggtttggagatgtcgcccatctcaacgaa 1726871 Query: 671 ga 672 || Sbjct: 1726870 ga 1726869 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 172 ggttgcccgtcggctgtctaaagaagccaagccagctgctgtgtactcctctgatttgaa 231 |||||| |||||| || |||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 1727776 ggttgctcgtcggttggctaaagaagctaagccagttgccgtgtactcctctgatctgaa 1727717 Query: 232 gcgtgctgccgagactgcacgaactatagcaacagc 267 |||||||||||| || || | ||||||||| ||||| Sbjct: 1727716 gcgtgctgccgaaacggctcaaactatagctacagc 1727681 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 416 ggtggtggggagagtcttgatcaactatctgcacggtgtgtttcgtacttggacacaata 475 ||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| Sbjct: 1727355 ggtggcggggagagccttgaccaactatctgagcggtgtgtttcgtacttgaacacaata 1727296 Query: 476 gctaggaaacacaaggg 492 ||| |||| |||||||| Sbjct: 1727295 gctgggaagcacaaggg 1727279 >emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 133 bits (67), Expect = 2e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 284 ctggtgttggatccagcactgagagaaaggcacatgggagatctacacggcttgaagttt 343 ||||||||| ||| ||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 112899 ctggtgttgagtcctgcactgagagaaaggcacatgggagatctccatggtttgaagttt 112958 Query: 344 gatgatgccgtgagtagcaagcttgaggcgttcaaggctttctcatctgatgagaggaac 403 ||||||||||| || ||||||| ||| || | |||||||||||||||||| || || | | Sbjct: 112959 gatgatgccgtcagaagcaagcctgacgcttacaaggctttctcatctgaagacagaagc 113018 Query: 404 caagaaatccc 414 ||||||||||| Sbjct: 113019 caagaaatccc 113029 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Plus Query: 491 ggggaacgggtgattgtggtctcccattttgcaagcatagaggaactgtgcaggcatgcc 550 ||||| || |||||||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 113434 ggggagcgagtgattgtggtctcccatggagcgagcatcgaggaactctgcagacacgcc 113493 Query: 551 gatccaaccaactcaactcgcaggagaattcccaacacttcgatcagtgttctccatatt 610 |||||||||| |||| |||||||||||| || |||||||||||| | || || | ||| Sbjct: 113494 gatccaaccagctcagttcgcaggagaatcccaaacacttcgatctgcgtcttcaacatt 113553 Query: 611 tctggcgccaacggccagtggatcctcgagaggttaggagacgttagccatctcaacgaa 670 |||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 113554 tctggctccaccggccattggattctcgagaggtttggagatgtcgcccatctcaacgaa 113613 Query: 671 ga 672 || Sbjct: 113614 ga 113615 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 172 ggttgcccgtcggctgtctaaagaagccaagccagctgctgtgtactcctctgatttgaa 231 |||||| |||||| || |||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 112708 ggttgctcgtcggttggctaaagaagctaagccagttgccgtgtactcctctgatctgaa 112767 Query: 232 gcgtgctgccgagactgcacgaactatagcaacagc 267 |||||||||||| || || | ||||||||| ||||| Sbjct: 112768 gcgtgctgccgaaacggctcaaactatagctacagc 112803 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 416 ggtggtggggagagtcttgatcaactatctgcacggtgtgtttcgtacttggacacaata 475 ||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| Sbjct: 113129 ggtggcggggagagccttgaccaactatctgagcggtgtgtttcgtacttgaacacaata 113188 Query: 476 gctaggaaacacaaggg 492 ||| |||| |||||||| Sbjct: 113189 gctgggaagcacaaggg 113205 >emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 133 bits (67), Expect = 2e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 284 ctggtgttggatccagcactgagagaaaggcacatgggagatctacacggcttgaagttt 343 ||||||||| ||| ||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 39336 ctggtgttgagtcctgcactgagagaaaggcacatgggagatctccatggtttgaagttt 39395 Query: 344 gatgatgccgtgagtagcaagcttgaggcgttcaaggctttctcatctgatgagaggaac 403 ||||||||||| || ||||||| ||| || | |||||||||||||||||| || || | | Sbjct: 39396 gatgatgccgtcagaagcaagcctgacgcttacaaggctttctcatctgaagacagaagc 39455 Query: 404 caagaaatccc 414 ||||||||||| Sbjct: 39456 caagaaatccc 39466 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Plus Query: 491 ggggaacgggtgattgtggtctcccattttgcaagcatagaggaactgtgcaggcatgcc 550 ||||| || |||||||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 39871 ggggagcgagtgattgtggtctcccatggagcgagcatcgaggaactctgcagacacgcc 39930 Query: 551 gatccaaccaactcaactcgcaggagaattcccaacacttcgatcagtgttctccatatt 610 |||||||||| |||| |||||||||||| || |||||||||||| | || || | ||| Sbjct: 39931 gatccaaccagctcagttcgcaggagaatcccaaacacttcgatctgcgtcttcaacatt 39990 Query: 611 tctggcgccaacggccagtggatcctcgagaggttaggagacgttagccatctcaacgaa 670 |||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 39991 tctggctccaccggccattggattctcgagaggtttggagatgtcgcccatctcaacgaa 40050 Query: 671 ga 672 || Sbjct: 40051 ga 40052 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 172 ggttgcccgtcggctgtctaaagaagccaagccagctgctgtgtactcctctgatttgaa 231 |||||| |||||| || |||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 39145 ggttgctcgtcggttggctaaagaagctaagccagttgccgtgtactcctctgatctgaa 39204 Query: 232 gcgtgctgccgagactgcacgaactatagcaacagc 267 |||||||||||| || || | ||||||||| ||||| Sbjct: 39205 gcgtgctgccgaaacggctcaaactatagctacagc 39240 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 416 ggtggtggggagagtcttgatcaactatctgcacggtgtgtttcgtacttggacacaata 475 ||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| Sbjct: 39566 ggtggcggggagagccttgaccaactatctgagcggtgtgtttcgtacttgaacacaata 39625 Query: 476 gctaggaaacacaaggg 492 ||| |||| |||||||| Sbjct: 39626 gctgggaagcacaaggg 39642 >gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 125 bits (63), Expect = 4e-25 Identities = 114/131 (87%) Strand = Plus / Minus Query: 284 ctggtgttggatccagcactgagagaaaggcacatgggagatctacacggcttgaagttt 343 ||||||||| ||| ||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 10313 ctggtgttgagtcctgcactgagagaaaggcacatgggagatctccatggtttgaagttt 10254 Query: 344 gatgatgccgtgagtagcaagcttgaggcgttcaaggctttctcatctgatgagaggaac 403 || |||||||| || ||||||| ||| || | |||||||||||||||||| || || | | Sbjct: 10253 gaagatgccgtcagaagcaagcctgacgcttacaaggctttctcatctgaagacagaagc 10194 Query: 404 caagaaatccc 414 ||||||||||| Sbjct: 10193 caagaaatccc 10183 Score = 123 bits (62), Expect = 1e-24 Identities = 152/182 (83%) Strand = Plus / Minus Query: 491 ggggaacgggtgattgtggtctcccattttgcaagcatagaggaactgtgcaggcatgcc 550 ||||| || |||||||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 9778 ggggagcgagtgattgtggtctcccatggagcgagcatcgaggaactctgcagacacgcc 9719 Query: 551 gatccaaccaactcaactcgcaggagaattcccaacacttcgatcagtgttctccatatt 610 |||||||||| |||| |||||||||||| || |||||||||||| | || || | ||| Sbjct: 9718 gatccaaccagctcagttcgcaggagaatcccaaacacttcgatctgcgtcttcaacatt 9659 Query: 611 tctggcgccaacggccagtggatcctcgagaggttaggagacgttagccatctcaacgaa 670 |||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 9658 tctggctccaccggccattggattctcgagaggtttggagatgtcgcccatctcaacgaa 9599 Query: 671 ga 672 || Sbjct: 9598 ga 9597 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 172 ggttgcccgtcggctgtctaaagaagccaagccagctgctgtgtactcctctgatttgaa 231 |||||| |||||| || |||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 10504 ggttgctcgtcggttggctaaagaagctaagccagttgccgtgtactcctctgatctgaa 10445 Query: 232 gcgtgctgccgagactgcacgaactatagcaacagc 267 |||||||||||| || || | ||||||||| ||||| Sbjct: 10444 gcgtgctgccgaaacggctcaaactatagctacagc 10409 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 416 ggtggtggggagagtcttgatcaactatctgcacggtgtgtttcgtacttggacacaata 475 ||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| Sbjct: 10083 ggtggcggggagagccttgaccaactatctgagcggtgtgtttcgtacttgaacacaata 10024 Query: 476 gctaggaaacacaaggg 492 ||| |||| |||||||| Sbjct: 10023 gctgggaagcacaaggg 10007