BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033k20 (1068 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g... 299 1e-77 dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 1e-77 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 198 3e-47 gb|DQ245427.1| Zea mays clone 15420 mRNA sequence 125 4e-25 >ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g0605400 (Os12g0605400) mRNA, complete cds Length = 923 Score = 299 bits (151), Expect = 1e-77 Identities = 223/247 (90%) Strand = Plus / Plus Query: 502 aagcttttctgcgacaaggattatccagaccggccaccaactgttagatttcactcaaga 561 |||||||||||||||||||| || |||||| ||||||||||||| | ||||||||||||| Sbjct: 405 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 464 Query: 562 atcaatatgacttgtgtaaatcctgagactggagtggtcgaccaaaggaagtttggcctg 621 ||||| ||||| |||||||| || |||| |||| |||| |||||||||||||| ||||| Sbjct: 465 atcaacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctg 524 Query: 622 ttgtcaaattggcgccgtgagtacacaatggagagtatcttgacgcagcttaagaaagaa 681 ||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| Sbjct: 525 ttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagag 584 Query: 682 atggcaacatcacacaaccggaaattagtgcagcctccagaggggacattcttctaaaag 741 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 585 atggcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctagaag 644 Query: 742 catgcgc 748 || |||| Sbjct: 645 caggcgc 651 Score = 224 bits (113), Expect = 6e-55 Identities = 158/173 (91%) Strand = Plus / Plus Query: 193 gctggaatgacgtcgagtggagatccatcgggagttgtcgtgcctaggaacttcagactg 252 ||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 195 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 254 Query: 253 ctagaagagcttgagagaggagagaagggcattggggatggaacagttagctacggaatg 312 |||||||||||||||||||| ||||||||||| || |||||| |||| ||||| |||||| Sbjct: 255 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 314 Query: 313 gatgacgcagatgatatctacatgcgctcttggacaggaacaataatcggtcc 365 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 315 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtcc 367 >dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 299 bits (151), Expect = 1e-77 Identities = 223/247 (90%) Strand = Plus / Plus Query: 502 aagcttttctgcgacaaggattatccagaccggccaccaactgttagatttcactcaaga 561 |||||||||||||||||||| || |||||| ||||||||||||| | ||||||||||||| Sbjct: 406 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 465 Query: 562 atcaatatgacttgtgtaaatcctgagactggagtggtcgaccaaaggaagtttggcctg 621 ||||| ||||| |||||||| || |||| |||| |||| |||||||||||||| ||||| Sbjct: 466 atcaacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctg 525 Query: 622 ttgtcaaattggcgccgtgagtacacaatggagagtatcttgacgcagcttaagaaagaa 681 ||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||| Sbjct: 526 ttgtcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagag 585 Query: 682 atggcaacatcacacaaccggaaattagtgcagcctccagaggggacattcttctaaaag 741 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 586 atggcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctagaag 645 Query: 742 catgcgc 748 || |||| Sbjct: 646 caggcgc 652 Score = 224 bits (113), Expect = 6e-55 Identities = 158/173 (91%) Strand = Plus / Plus Query: 193 gctggaatgacgtcgagtggagatccatcgggagttgtcgtgcctaggaacttcagactg 252 ||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 196 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 255 Query: 253 ctagaagagcttgagagaggagagaagggcattggggatggaacagttagctacggaatg 312 |||||||||||||||||||| ||||||||||| || |||||| |||| ||||| |||||| Sbjct: 256 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 315 Query: 313 gatgacgcagatgatatctacatgcgctcttggacaggaacaataatcggtcc 365 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 316 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtcc 368 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 198 bits (100), Expect = 3e-47 Identities = 136/148 (91%) Strand = Plus / Minus Query: 601 gaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggagagtatc 660 |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25592889 gaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatc 25592830 Query: 661 ttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtgcagcctcca 720 ||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 25592829 ttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctcca 25592770 Query: 721 gaggggacattcttctaaaagcatgcgc 748 ||||||||||||||||| ||||| |||| Sbjct: 25592769 gaggggacattcttctagaagcaggcgc 25592742 Score = 190 bits (96), Expect = 8e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 232 gtgcctaggaacttcagactgctagaagagcttgagagaggagagaagggcattggggat 291 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 25593373 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 25593314 Query: 292 ggaacagttagctacggaatggatgacgcagatgatatctacatgcgctcttggacagga 351 ||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 25593313 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 25593254 Query: 352 acaataatcggtccacacaacgtaagatgttt 383 ||||| || ||||| || |||||||| ||||| Sbjct: 25593253 acaattattggtccccataacgtaagttgttt 25593222 Score = 111 bits (56), Expect = 6e-21 Identities = 116/136 (85%) Strand = Plus / Minus Query: 464 tttggtagaccgtccacgagggccgaatttatcagttaaagcttttctgcgacaaggatt 523 |||| ||||| ||||| |||||||| || || || | |||||||||||||||||||| | Sbjct: 25593117 tttgatagactgtccatgagggccggatataccaactgaagcttttctgcgacaaggact 25593058 Query: 524 atccagaccggccaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatc 583 | |||||| ||||||||||||| | |||||||||||||||||| ||||| |||||||| | Sbjct: 25593057 acccagacaggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacc 25592998 Query: 584 ctgagactggagtggt 599 | |||| |||| |||| Sbjct: 25592997 cagagaatggattggt 25592982 >emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 198 bits (100), Expect = 3e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 601 gaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggagagtatc 660 |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 80829 gaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatc 80888 Query: 661 ttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtgcagcctcca 720 ||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 80889 ttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctcca 80948 Query: 721 gaggggacattcttctaaaagcatgcgc 748 ||||||||||||||||| ||||| |||| Sbjct: 80949 gaggggacattcttctagaagcaggcgc 80976 Score = 190 bits (96), Expect = 8e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 232 gtgcctaggaacttcagactgctagaagagcttgagagaggagagaagggcattggggat 291 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 80345 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 80404 Query: 292 ggaacagttagctacggaatggatgacgcagatgatatctacatgcgctcttggacagga 351 ||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 80405 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 80464 Query: 352 acaataatcggtccacacaacgtaagatgttt 383 ||||| || ||||| || |||||||| ||||| Sbjct: 80465 acaattattggtccccataacgtaagttgttt 80496 Score = 111 bits (56), Expect = 6e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 464 tttggtagaccgtccacgagggccgaatttatcagttaaagcttttctgcgacaaggatt 523 |||| ||||| ||||| |||||||| || || || | |||||||||||||||||||| | Sbjct: 80601 tttgatagactgtccatgagggccggatataccaactgaagcttttctgcgacaaggact 80660 Query: 524 atccagaccggccaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatc 583 | |||||| ||||||||||||| | |||||||||||||||||| ||||| |||||||| | Sbjct: 80661 acccagacaggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacc 80720 Query: 584 ctgagactggagtggt 599 | |||| |||| |||| Sbjct: 80721 cagagaatggattggt 80736 >gb|DQ245427.1| Zea mays clone 15420 mRNA sequence Length = 765 Score = 125 bits (63), Expect = 4e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 229 gtcgtgcctaggaacttcagactgctagaagagcttgagagaggagagaagggcattggg 288 ||||| ||| |||||||||| || |||||||||||||| | ||||||||||||||||| Sbjct: 108 gtcgttcctcggaacttcaggctcctagaagagcttgaacgtggagagaagggcattgga 167 Query: 289 gatggaacagttagctacggaatggatgacgcagatgatatctacatgcgctcttggac 347 ||||| ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 168 gatgggacagtgagctatggaatggatgacgcagatgacatctacatgcgatcatggac 226