BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033j14 (1209 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic seque... 232 3e-57 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 232 3e-57 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 232 3e-57 emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584... 232 3e-57 emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 232 3e-57 >gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic sequence, complete sequence Length = 49565 Score = 232 bits (117), Expect = 3e-57 Identities = 182/203 (89%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 558 tgcaaatcatcaacgatcgtgagaccgggaggtcgcgcgggttcggcttcgtcaccttcg 617 |||| ||||||||||| | ||||| |||||||| || ||||| ||||||||||||||| Sbjct: 16620 tgcagatcatcaacgacagggagacggggaggtcacgtgggtttggcttcgtcaccttct 16561 Query: 618 gcagcgagcaggcgatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggcc 677 | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 16560 cctccgagcagtcgatgcgcgacgccatcgagggcatgaacggcaaggagctcgacggcc 16501 Query: 678 gcagcatcaccgtcaacgaggcccagtcccgccgctccggcggcgggggc---ggcttcg 734 ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||| || Sbjct: 16500 gcaacatcaccgtcaatgaggcccagtcccgccgctccggcggcggaggcgggggctacg 16441 Query: 735 gcggcggcggtggcggctacggc 757 ||||||||||||||||||||||| Sbjct: 16440 gcggcggcggtggcggctacggc 16418 Score = 131 bits (66), Expect = 7e-27 Identities = 90/98 (91%) Strand = Plus / Minus Query: 102 gagtaccgctgcttcgtcggcggcttcgcctggaccaccgacgaccgctccctcgaggct 161 |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 16958 gagtaccgctgcttcgtcggcggcctcgcctgggccaccgacgaccgctccctcgaggcc 16899 Query: 162 gccttcagccccttcggcgagatcctcgagtccaaggt 199 |||||| | ||| ||||||||||||||| |||||||| Sbjct: 16898 gccttctccacctacggcgagatcctcgactccaaggt 16861 Score = 97.6 bits (49), Expect = 1e-16 Identities = 78/87 (89%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 782 ggcggcggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctacggc 841 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 16384 ggcggcggcggctacgg---gcgccgtgagggcggctacggtggcggcggcggctacggc 16328 Query: 842 ggtggcggtggtggctacggcggcggc 868 || ||| |||| ||| |||||||||| Sbjct: 16327 ggcggccgtggcggcggcggcggcggc 16301 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 232 bits (117), Expect = 3e-57 Identities = 159/173 (91%) Strand = Plus / Plus Query: 557 gtgcaaatcatcaacgatcgtgagaccgggaggtcgcgcgggttcggcttcgtcaccttc 616 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 27096698 gtgcagatcatcaacgatcgggagacggggaggtcgcgcgggttcgggttcgtgacgttc 27096757 Query: 617 ggcagcgagcaggcgatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 676 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27096758 tcgagcgagcaggccatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 27096817 Query: 677 cgcagcatcaccgtcaacgaggcccagtcccgccgctccggcggcgggggcgg 729 |||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 27096818 cgcaacatcaccgtcaacgaggcccagtcgcgccgctccggaggcggaggcgg 27096870 Score = 155 bits (78), Expect = 5e-34 Identities = 113/124 (91%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 79 gcatggcggcgtcggacgttgttgagtaccgctgcttcgtcggcggcttcgcctggacca 138 ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 27096475 gcatggcggcgccgga---tgttgagtaccgctgcttcgtcggcggcctcgcctgggcca 27096531 Query: 139 ccgacgaccgctccctcgaggctgccttcagccccttcggcgagatcctcgagtccaagg 198 ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 27096532 ccgacgaccgctccctcgaagccgccttctccaccttcggcgagatcctcgagtccaagg 27096591 Query: 199 tccg 202 |||| Sbjct: 27096592 tccg 27096595 Score = 147 bits (74), Expect = 1e-31 Identities = 153/180 (85%), Gaps = 12/180 (6%) Strand = Plus / Plus Query: 779 ggcggcggcggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 838 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27096932 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 27096991 Query: 839 ggcggtggcggtggtggctacggcggcggcggccgcagtggcggctacggcggccgcagc 898 || || ||| |||| ||||||||||||| | | || ||||||||| ||||| || Sbjct: 27096992 ggtggcggccgtgg------cggcggcggcggctacggcggtggctacggcagccgcggc 27097045 Query: 899 ggtggctacggcaactccgacgggaactggaggagctgagcggtggggccctcgtggcca 958 || |||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 27097046 gg------cggcaactccgacgggaactggaggaactgagcggtggggccctcatggcca 27097099 Score = 91.7 bits (46), Expect = 6e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 737 ggcggcggtggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 796 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27096932 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 27096991 Query: 797 gg 798 || Sbjct: 27096992 gg 27096993 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 232 bits (117), Expect = 3e-57 Identities = 182/203 (89%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 558 tgcaaatcatcaacgatcgtgagaccgggaggtcgcgcgggttcggcttcgtcaccttcg 617 |||| ||||||||||| | ||||| |||||||| || ||||| ||||||||||||||| Sbjct: 26260515 tgcagatcatcaacgacagggagacggggaggtcacgtgggtttggcttcgtcaccttct 26260574 Query: 618 gcagcgagcaggcgatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggcc 677 | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 26260575 cctccgagcagtcgatgcgcgacgccatcgagggcatgaacggcaaggagctcgacggcc 26260634 Query: 678 gcagcatcaccgtcaacgaggcccagtcccgccgctccggcggcgggggc---ggcttcg 734 ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||| || Sbjct: 26260635 gcaacatcaccgtcaatgaggcccagtcccgccgctccggcggcggaggcgggggctacg 26260694 Query: 735 gcggcggcggtggcggctacggc 757 ||||||||||||||||||||||| Sbjct: 26260695 gcggcggcggtggcggctacggc 26260717 Score = 131 bits (66), Expect = 7e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 102 gagtaccgctgcttcgtcggcggcttcgcctggaccaccgacgaccgctccctcgaggct 161 |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 26260177 gagtaccgctgcttcgtcggcggcctcgcctgggccaccgacgaccgctccctcgaggcc 26260236 Query: 162 gccttcagccccttcggcgagatcctcgagtccaaggt 199 |||||| | ||| ||||||||||||||| |||||||| Sbjct: 26260237 gccttctccacctacggcgagatcctcgactccaaggt 26260274 Score = 97.6 bits (49), Expect = 1e-16 Identities = 78/87 (89%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 782 ggcggcggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctacggc 841 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 26260751 ggcggcggcggctacgg---gcgccgtgagggcggctacggtggcggcggcggctacggc 26260807 Query: 842 ggtggcggtggtggctacggcggcggc 868 || ||| |||| ||| |||||||||| Sbjct: 26260808 ggcggccgtggcggcggcggcggcggc 26260834 >emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 232 bits (117), Expect = 3e-57 Identities = 159/173 (91%) Strand = Plus / Minus Query: 557 gtgcaaatcatcaacgatcgtgagaccgggaggtcgcgcgggttcggcttcgtcaccttc 616 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 59539 gtgcagatcatcaacgatcgggagacggggaggtcgcgcgggttcgggttcgtgacgttc 59480 Query: 617 ggcagcgagcaggcgatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 676 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59479 tcgagcgagcaggccatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 59420 Query: 677 cgcagcatcaccgtcaacgaggcccagtcccgccgctccggcggcgggggcgg 729 |||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 59419 cgcaacatcaccgtcaacgaggcccagtcgcgccgctccggaggcggaggcgg 59367 Score = 155 bits (78), Expect = 5e-34 Identities = 113/124 (91%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 79 gcatggcggcgtcggacgttgttgagtaccgctgcttcgtcggcggcttcgcctggacca 138 ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 59762 gcatggcggcgccgga---tgttgagtaccgctgcttcgtcggcggcctcgcctgggcca 59706 Query: 139 ccgacgaccgctccctcgaggctgccttcagccccttcggcgagatcctcgagtccaagg 198 ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 59705 ccgacgaccgctccctcgaagccgccttctccaccttcggcgagatcctcgagtccaagg 59646 Query: 199 tccg 202 |||| Sbjct: 59645 tccg 59642 Score = 147 bits (74), Expect = 1e-31 Identities = 153/180 (85%), Gaps = 12/180 (6%) Strand = Plus / Minus Query: 779 ggcggcggcggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 838 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 59305 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 59246 Query: 839 ggcggtggcggtggtggctacggcggcggcggccgcagtggcggctacggcggccgcagc 898 || || ||| |||| ||||||||||||| | | || ||||||||| ||||| || Sbjct: 59245 ggtggcggccgtgg------cggcggcggcggctacggcggtggctacggcagccgcggc 59192 Query: 899 ggtggctacggcaactccgacgggaactggaggagctgagcggtggggccctcgtggcca 958 || |||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 59191 gg------cggcaactccgacgggaactggaggaactgagcggtggggccctcatggcca 59138 Score = 91.7 bits (46), Expect = 6e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 737 ggcggcggtggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 796 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 59305 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 59246 Query: 797 gg 798 || Sbjct: 59245 gg 59244 >emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 232 bits (117), Expect = 3e-57 Identities = 159/173 (91%) Strand = Plus / Plus Query: 557 gtgcaaatcatcaacgatcgtgagaccgggaggtcgcgcgggttcggcttcgtcaccttc 616 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 35593 gtgcagatcatcaacgatcgggagacggggaggtcgcgcgggttcgggttcgtgacgttc 35652 Query: 617 ggcagcgagcaggcgatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 676 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35653 tcgagcgagcaggccatgcgcgacgccatcgaggggatgaacggcaaggagctcgacggc 35712 Query: 677 cgcagcatcaccgtcaacgaggcccagtcccgccgctccggcggcgggggcgg 729 |||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 35713 cgcaacatcaccgtcaacgaggcccagtcgcgccgctccggaggcggaggcgg 35765 Score = 155 bits (78), Expect = 5e-34 Identities = 113/124 (91%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 79 gcatggcggcgtcggacgttgttgagtaccgctgcttcgtcggcggcttcgcctggacca 138 ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| Sbjct: 35370 gcatggcggcgccgga---tgttgagtaccgctgcttcgtcggcggcctcgcctgggcca 35426 Query: 139 ccgacgaccgctccctcgaggctgccttcagccccttcggcgagatcctcgagtccaagg 198 ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||| Sbjct: 35427 ccgacgaccgctccctcgaagccgccttctccaccttcggcgagatcctcgagtccaagg 35486 Query: 199 tccg 202 |||| Sbjct: 35487 tccg 35490 Score = 147 bits (74), Expect = 1e-31 Identities = 153/180 (85%), Gaps = 12/180 (6%) Strand = Plus / Plus Query: 779 ggcggcggcggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 838 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 35827 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 35886 Query: 839 ggcggtggcggtggtggctacggcggcggcggccgcagtggcggctacggcggccgcagc 898 || || ||| |||| ||||||||||||| | | || ||||||||| ||||| || Sbjct: 35887 ggtggcggccgtgg------cggcggcggcggctacggcggtggctacggcagccgcggc 35940 Query: 899 ggtggctacggcaactccgacgggaactggaggagctgagcggtggggccctcgtggcca 958 || |||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 35941 gg------cggcaactccgacgggaactggaggaactgagcggtggggccctcatggcca 35994 Score = 91.7 bits (46), Expect = 6e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 737 ggcggcggtggcggctacggccagcgccgtgagggcggctacggcggcggcggcggctac 796 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 35827 ggcggcggcggtggctacggccagcgccgtgaaggcggctacggcggtggcggcggctac 35886 Query: 797 gg 798 || Sbjct: 35887 gg 35888