BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033g12 (1334 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063983.1| Oryza sativa (japonica cultivar-group) Os06g... 198 4e-47 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 198 4e-47 dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 198 4e-47 dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 4e-47 ref|NM_001058582.1| Oryza sativa (japonica cultivar-group) Os04g... 190 1e-44 >ref|NM_001063983.1| Oryza sativa (japonica cultivar-group) Os06g0300000 (Os06g0300000) mRNA, complete cds Length = 1393 Score = 198 bits (100), Expect = 4e-47 Identities = 271/328 (82%) Strand = Plus / Plus Query: 350 cgtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacga 409 |||| ||||||||| ||||| ||||||||| |||| | |||||||| |||| ||||| Sbjct: 383 cgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacga 442 Query: 410 ggcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaa 469 |||| |||||||||| ||||| || | | ||||||||||| ||||| |||||||||| Sbjct: 443 ggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaa 502 Query: 470 cgccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggt 529 ||| |||||| |||| ||||| ||||| ||||||||||||| | |||| | ||| Sbjct: 503 cgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggt 562 Query: 530 ggcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagg 589 | |||||||||||||||| ||||||| |||||||||||||||| || |||||||| || Sbjct: 563 gaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggg 622 Query: 590 gatggtggagcggggcaggggcgccatcgtcaacgtcggctcgggctccacgctggccgt 649 |||||||| |||||| ||||||||| |||||||| ||||||| ||||||||| |||| | Sbjct: 623 gatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccat 682 Query: 650 cccctccttcccgctgtacaccgtctac 677 ||| |||||||| || ||| |||||||| Sbjct: 683 cccttccttcccactctactccgtctac 710 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 779 gctgagttgtcgaggagcctttacgtggagtacaggagcaagggaatcgacgtgcaat 836 |||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct: 732 gctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatcgacgtgcaat 789 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 198 bits (100), Expect = 4e-47 Identities = 271/328 (82%) Strand = Plus / Minus Query: 350 cgtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacga 409 |||| ||||||||| ||||| ||||||||| |||| | |||||||| |||| ||||| Sbjct: 11017262 cgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacga 11017203 Query: 410 ggcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaa 469 |||| |||||||||| ||||| || | | ||||||||||| ||||| |||||||||| Sbjct: 11017202 ggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaa 11017143 Query: 470 cgccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggt 529 ||| |||||| |||| ||||| ||||| ||||||||||||| | |||| | ||| Sbjct: 11017142 cgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggt 11017083 Query: 530 ggcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagg 589 | |||||||||||||||| ||||||| |||||||||||||||| || |||||||| || Sbjct: 11017082 gaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggg 11017023 Query: 590 gatggtggagcggggcaggggcgccatcgtcaacgtcggctcgggctccacgctggccgt 649 |||||||| |||||| ||||||||| |||||||| ||||||| ||||||||| |||| | Sbjct: 11017022 gatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccat 11016963 Query: 650 cccctccttcccgctgtacaccgtctac 677 ||| |||||||| || ||| |||||||| Sbjct: 11016962 cccttccttcccactctactccgtctac 11016935 Score = 139 bits (70), Expect = 3e-29 Identities = 214/262 (81%) Strand = Plus / Minus Query: 351 gtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacgag 410 |||||||||| | |||||| ||||||||| ||||||| ||| ||| | | |||||| || Sbjct: 10960662 gtgcagaccaaggccgtggtgttcgacctgtccctcgcctcgaccccggacggcgaccag 10960603 Query: 411 gcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaac 470 || |||||||||| ||||| ||| | | ||||||||||| ||||| ||||||||||| Sbjct: 10960602 ccgctgcggcggctgcgggaggccgtggcggggctggacgtcggggtggtggtgaacaac 10960543 Query: 471 gccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggtg 530 ||| ||| | | ||| |||||| ||||| | |||||||||||||||||| | |||| Sbjct: 10960542 gccagcgaggggaggcccggcgcggtgtacctccacgaggcggacgtggaggagtgggtg 10960483 Query: 531 gcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccaggg 590 |||| |||||||||| || |||| |||| ||||||||||| || |||||||| ||| Sbjct: 10960482 aggatggcgcgggtgaacgtgtcggcggtgacagaggtgacggcggcggtgctgcccggg 10960423 Query: 591 atggtggagcggggcaggggcg 612 |||||||||||||||||||||| Sbjct: 10960422 atggtggagcggggcaggggcg 10960401 Score = 133 bits (67), Expect = 2e-27 Identities = 226/279 (81%) Strand = Plus / Minus Query: 355 agaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacgaggcga 414 |||||| |||||||| ||| ||||| |||||||||| ||| | | || || ||| || Sbjct: 10976940 agaccaagaccgtggtgtttgacctgtccctcgtctggacccccgatggtgatgagccgc 10976881 Query: 415 tgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaacgccg 474 |||||||||| ||||| || | || ||||||||||| ||||| ||||||||||||||| Sbjct: 10976880 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaacaacgccg 10976821 Query: 475 gcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggtggcga 534 ||||| ||||| ||||| | ||| |||||||||||||||||||| | |||| || Sbjct: 10976820 gcgtggcgaagcccggcgccgtctacctgcacgaggcggacgtggaggcgtgggtgagga 10976761 Query: 535 tgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagggatgg 594 || | ||||||||| || ||| |||||||||||||||| | ||||| || ||||||| Sbjct: 10976760 tggtgcgggtgaacatgtcggcagtgacggaggtgacggcggtggtgctacctgggatgg 10976701 Query: 595 tggagcggggcaggggcgccatcgtcaacgtcggctcgg 633 || |||||| |||||||||||||||||| ||||||||| Sbjct: 10976700 tgtcgcggggtaggggcgccatcgtcaacatcggctcgg 10976662 Score = 107 bits (54), Expect = 1e-19 Identities = 96/110 (87%) Strand = Plus / Minus Query: 504 cacgaggcggacgtggagcggctggtggcgatgatacgggtgaacgcgtgggcgctgacg 563 |||||||||||||||||| | |||| ||||| ||||||||| |||||| ||||| Sbjct: 10947469 cacgaggcggacgtggaggcgtgggtgagaatgatgcgggtgaacctgtgggcagtgacg 10947410 Query: 564 gaggtgacggccgccgtgctgccagggatggtggagcggggcaggggcgc 613 ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 10947409 gaggtgacggcggcggtgctgccagggatggtggagcggggcaggggcgc 10947360 Score = 91.7 bits (46), Expect = 7e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 767 tgcaggtatgtggctgagttgtcgaggagcctttacgtggagtacaggagcaagggaatc 826 |||||||| || |||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 11016458 tgcaggtacgttgctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatc 11016399 Query: 827 gacgtgcaat 836 |||||||||| Sbjct: 11016398 gacgtgcaat 11016389 >dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0501G08 Length = 173505 Score = 198 bits (100), Expect = 4e-47 Identities = 271/328 (82%) Strand = Plus / Minus Query: 350 cgtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacga 409 |||| ||||||||| ||||| ||||||||| |||| | |||||||| |||| ||||| Sbjct: 101344 cgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacga 101285 Query: 410 ggcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaa 469 |||| |||||||||| ||||| || | | ||||||||||| ||||| |||||||||| Sbjct: 101284 ggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaa 101225 Query: 470 cgccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggt 529 ||| |||||| |||| ||||| ||||| ||||||||||||| | |||| | ||| Sbjct: 101224 cgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggt 101165 Query: 530 ggcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagg 589 | |||||||||||||||| ||||||| |||||||||||||||| || |||||||| || Sbjct: 101164 gaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggg 101105 Query: 590 gatggtggagcggggcaggggcgccatcgtcaacgtcggctcgggctccacgctggccgt 649 |||||||| |||||| ||||||||| |||||||| ||||||| ||||||||| |||| | Sbjct: 101104 gatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccat 101045 Query: 650 cccctccttcccgctgtacaccgtctac 677 ||| |||||||| || ||| |||||||| Sbjct: 101044 cccttccttcccactctactccgtctac 101017 Score = 139 bits (70), Expect = 3e-29 Identities = 214/262 (81%) Strand = Plus / Minus Query: 351 gtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacgag 410 |||||||||| | |||||| ||||||||| ||||||| ||| ||| | | |||||| || Sbjct: 44744 gtgcagaccaaggccgtggtgttcgacctgtccctcgcctcgaccccggacggcgaccag 44685 Query: 411 gcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaac 470 || |||||||||| ||||| ||| | | ||||||||||| ||||| ||||||||||| Sbjct: 44684 ccgctgcggcggctgcgggaggccgtggcggggctggacgtcggggtggtggtgaacaac 44625 Query: 471 gccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggtg 530 ||| ||| | | ||| |||||| ||||| | |||||||||||||||||| | |||| Sbjct: 44624 gccagcgaggggaggcccggcgcggtgtacctccacgaggcggacgtggaggagtgggtg 44565 Query: 531 gcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccaggg 590 |||| |||||||||| || |||| |||| ||||||||||| || |||||||| ||| Sbjct: 44564 aggatggcgcgggtgaacgtgtcggcggtgacagaggtgacggcggcggtgctgcccggg 44505 Query: 591 atggtggagcggggcaggggcg 612 |||||||||||||||||||||| Sbjct: 44504 atggtggagcggggcaggggcg 44483 Score = 133 bits (67), Expect = 2e-27 Identities = 226/279 (81%) Strand = Plus / Minus Query: 355 agaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacgaggcga 414 |||||| |||||||| ||| ||||| |||||||||| ||| | | || || ||| || Sbjct: 61022 agaccaagaccgtggtgtttgacctgtccctcgtctggacccccgatggtgatgagccgc 60963 Query: 415 tgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaacgccg 474 |||||||||| ||||| || | || ||||||||||| ||||| ||||||||||||||| Sbjct: 60962 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaacaacgccg 60903 Query: 475 gcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggtggcga 534 ||||| ||||| ||||| | ||| |||||||||||||||||||| | |||| || Sbjct: 60902 gcgtggcgaagcccggcgccgtctacctgcacgaggcggacgtggaggcgtgggtgagga 60843 Query: 535 tgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagggatgg 594 || | ||||||||| || ||| |||||||||||||||| | ||||| || ||||||| Sbjct: 60842 tggtgcgggtgaacatgtcggcagtgacggaggtgacggcggtggtgctacctgggatgg 60783 Query: 595 tggagcggggcaggggcgccatcgtcaacgtcggctcgg 633 || |||||| |||||||||||||||||| ||||||||| Sbjct: 60782 tgtcgcggggtaggggcgccatcgtcaacatcggctcgg 60744 Score = 107 bits (54), Expect = 1e-19 Identities = 96/110 (87%) Strand = Plus / Minus Query: 504 cacgaggcggacgtggagcggctggtggcgatgatacgggtgaacgcgtgggcgctgacg 563 |||||||||||||||||| | |||| ||||| ||||||||| |||||| ||||| Sbjct: 31551 cacgaggcggacgtggaggcgtgggtgagaatgatgcgggtgaacctgtgggcagtgacg 31492 Query: 564 gaggtgacggccgccgtgctgccagggatggtggagcggggcaggggcgc 613 ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 31491 gaggtgacggcggcggtgctgccagggatggtggagcggggcaggggcgc 31442 Score = 91.7 bits (46), Expect = 7e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 767 tgcaggtatgtggctgagttgtcgaggagcctttacgtggagtacaggagcaagggaatc 826 |||||||| || |||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 100540 tgcaggtacgttgctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatc 100481 Query: 827 gacgtgcaat 836 |||||||||| Sbjct: 100480 gacgtgcaat 100471 >dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D07, full insert sequence Length = 1393 Score = 198 bits (100), Expect = 4e-47 Identities = 271/328 (82%) Strand = Plus / Plus Query: 350 cgtgcagaccaggaccgtggcgttcgacctctccctcgtctccaccgctcagggcgacga 409 |||| ||||||||| ||||| ||||||||| |||| | |||||||| |||| ||||| Sbjct: 383 cgtggagaccaggagcgtggtgttcgacctggccctggcgtccaccgcggagggggacga 442 Query: 410 ggcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctggtgaacaa 469 |||| |||||||||| ||||| || | | ||||||||||| ||||| |||||||||| Sbjct: 443 ggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtggtgaacaa 502 Query: 470 cgccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggagcggctggt 529 ||| |||||| |||| ||||| ||||| ||||||||||||| | |||| | ||| Sbjct: 503 cgcgggcgtggcgcggccgtgcgcggtgtacctgcacgaggcggaggcggaggcgtgggt 562 Query: 530 ggcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtgctgccagg 589 | |||||||||||||||| ||||||| |||||||||||||||| || |||||||| || Sbjct: 563 gaggatgatacgggtgaacctgtgggcggtgacggaggtgacggcggcggtgctgccggg 622 Query: 590 gatggtggagcggggcaggggcgccatcgtcaacgtcggctcgggctccacgctggccgt 649 |||||||| |||||| ||||||||| |||||||| ||||||| ||||||||| |||| | Sbjct: 623 gatggtggcgcgggggaggggcgccgtcgtcaacatcggctccggctccacggaggccat 682 Query: 650 cccctccttcccgctgtacaccgtctac 677 ||| |||||||| || ||| |||||||| Sbjct: 683 cccttccttcccactctactccgtctac 710 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 779 gctgagttgtcgaggagcctttacgtggagtacaggagcaagggaatcgacgtgcaat 836 |||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct: 732 gctgagttctcgaggagcctttacgtggaatacaagagcaaaggaatcgacgtgcaat 789 >ref|NM_001058582.1| Oryza sativa (japonica cultivar-group) Os04g0116600 (Os04g0116600) mRNA, complete cds Length = 1811 Score = 190 bits (96), Expect = 1e-44 Identities = 246/296 (83%) Strand = Plus / Plus Query: 402 ggcgacgaggcgatgcggcggctccgggaagccatcgatgggctggacgtgggggttctg 461 ||||| |||| |||||||||||| |||| || | || ||| |||| || ||| | ||| Sbjct: 398 ggcgaggaggggatgcggcggctgagggaggcggtggacggggtggaggtcgggatgctg 457 Query: 462 gtgaacaacgccggcgtgatcaagccgggcgcgctgtacgtgcacgaggcggacgtggag 521 ||||||||||||| |||| | ||| || ||||| ||| | |||||||| ||||||||| Sbjct: 458 gtgaacaacgccgccgtggcgaggcccggggcgctctactttcacgaggccgacgtggag 517 Query: 522 cggctggtggcgatgatacgggtgaacgcgtgggcgctgacggaggtgacggccgccgtg 581 ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 518 cggctggtggcgatgatacgggtgaacgccatggcgctgacggcggtgaccgccgccgtg 577 Query: 582 ctgccagggatggtggagcggggcaggggcgccatcgtcaacgtcggctcgggctccacg 641 ||||| | ||||| | ||| ||| |||| |||||||||||||||||||| |||||||| Sbjct: 578 ctgccggcgatggcgaggcgcggccggggagccatcgtcaacgtcggctccggctccacc 637 Query: 642 ctggccgtcccctccttcccgctgtacaccgtctacagctccacaaagcggtacgt 697 | |||||||| || || || ||||||| |||||||||||||| || |||||||| Sbjct: 638 gtcgccgtcccgtcttttcccttgtacactgtctacagctccaccaaacggtacgt 693 Score = 141 bits (71), Expect = 8e-30 Identities = 212/259 (81%) Strand = Plus / Plus Query: 786 tgtcgaggagcctttacgtggagtacaggagcaagggaatcgacgtgcaattgcaggtgc 845 |||||| |||||| ||||||||||||| | ||||| ||||||||||| ||||||||| Sbjct: 702 tgtcgaagagcctgtacgtggagtacaaagggaaggggatcgacgtgcagctgcaggtgc 761 Query: 846 cgttctacgtgcacaccaacatgctgtcgagcgccgtgaaatccaggatgatcttcccgg 905 | |||||||| ||||| |||||||| || |||| | || ||||||| | | |||| Sbjct: 762 ccttctacgtccacacaaacatgctctccgccgccatcaaggacaggatgctgctgccgg 821 Query: 906 cgttcgtggcgacggcggacgcgtacgcccgcgcggcggttcgctggatcgggcacggcc 965 |||||||||||||||| |||| ||| | || ||||||| || ||| | |||||||||| Sbjct: 822 cgttcgtggcgacggccgacgactacacgcgggcggcggcgcggtgggtggggcacggcc 881 Query: 966 ccgtgagcgtgcccgccgtctcccagcagctgcagtggttcctcgccggcttcgtgccgg 1025 | | ||| |||| || | |||||||||||||||||||||||||| ||||||||||| Sbjct: 882 acatcgccgtccccgacgccggccagcagctgcagtggttcctcgccgccttcgtgccgg 941 Query: 1026 acttcgcccacgactggta 1044 ||||||||||||||||||| Sbjct: 942 acttcgcccacgactggta 960 Score = 125 bits (63), Expect = 5e-25 Identities = 125/145 (86%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 157 acctcgctctctgcctgcgccggcccaaggacctccgccgct---acggctcgtgggcca 213 ||||||| |||| ||| ||||||||||||||||||||||||| ||||| ||||||| Sbjct: 144 acctcgccctctacctccgccggcccaaggacctccgccgctgctacggcgagtgggccg 203 Query: 214 tcgtcaccggcccgacgacggggctcgggcggtccatggccctggagtttgcgcgccggg 273 | ||||||||||||||||||||||||||||| ||||||||| ||||| | || ||||| | Sbjct: 204 tggtcaccggcccgacgacggggctcgggcgatccatggccatggagctcgcccgccgcg 263 Query: 274 gtctcaacctcgtccttgtcgacct 298 | ||||||||||||| ||||||| Sbjct: 264 gcttcaacctcgtcctcctcgacct 288