BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf033g04 (1005 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830246.1| Oryza sativa (indica cultivar-group) cDNA clone:... 432 e-117 ref|NM_001048309.1| Oryza sativa (japonica cultivar-group) Os01g... 424 e-115 dbj|AK060999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115 gb|DQ246079.1| Zea mays clone 14671 mRNA sequence 321 3e-84 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 317 5e-83 >emb|CT830246.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN085G02, full insert sequence Length = 866 Score = 432 bits (218), Expect = e-117 Identities = 289/312 (92%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 415 ccgacggccccgccctccccacacgcggctccgacgagttcaagcccttcatcaggcgcc 474 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 377 ccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcc 436 Query: 475 taccagagttcaagttctggtatgcaatcacaaaagcttttgttatagcttttgtgatga 534 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 437 tccccgagttcaagttctggtatgcaatcacaaaagcttttcttatagcttttgtgatga 496 Query: 535 ctttcttctctgtatttgatgttcctgtcttctggcccatacttgtctgctactgggtcg 594 ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | Sbjct: 497 ctttcttctctgtatttgatgttcctgtcttctggccgatacttctatgctactgggttg 556 Query: 595 ttcttttcatcctcacgatgaagcgccagattctgcacatgatcaaattcaaatatgtgc 654 |||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||| | Sbjct: 557 ttcttttcgtcctcacgatgaagcgccagattgtgcacatgataaaatacaaatatgttc 616 Query: 655 ccttcaatatcgggaagcagaaatatggtgggaagaagagcggcacaagcagcggttctt 714 |||||| ||||||||||||||||||| ||||||||||||| || ||||| |||||| Sbjct: 617 ccttcagcgtcgggaagcagaaatatggcgggaagaagagcg---caggcagcagttctt 673 Query: 715 caaaagactgat 726 | |||||||||| Sbjct: 674 cgaaagactgat 685 Score = 309 bits (156), Expect = 1e-80 Identities = 201/216 (93%) Strand = Plus / Plus Query: 189 gcggccaagtggcggacagacgcctcgcgggccttccagtactacctcgaccgctccacc 248 ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 139 gcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccacc 198 Query: 249 ccgcacgccacgggccgctggctcgccacgctcgccgtcgccgccatctacgcgctcagg 308 |||||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||| | Sbjct: 199 ccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgc 258 Query: 309 gtctacatggtccatggcttctacatcgtcacctacggcctcgggatctacctcctcaac 368 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 259 gtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctccttaac 318 Query: 369 ctcctcatcggcttcctctcccccatggtcgacccc 404 |||||||||||||||||||||||||||||||||||| Sbjct: 319 ctcctcatcggcttcctctcccccatggtcgacccc 354 Score = 139 bits (70), Expect = 2e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 767 aagatacagtcgatgatattccatgtgctaaataccaagtgtaatacttcattcgttatc 826 ||||||||| |||||||||| |||||||| ||||||| ||||||| ||||||| | ||| Sbjct: 728 aagatacagccgatgatatttgatgtgctacataccaattgtaatatttcattcat-atc 786 Query: 827 tagagctagaaggatattcacttatgtttctgacttggggtcacggtttaatttgatatt 886 ||||||||||||||||||||||| | |||| |||| || ||||||||||| |||||||| Sbjct: 787 tagagctagaaggatattcacttgtatttcagactctggttcacggtttaaattgatatt 846 Query: 887 gtggtagagtgctttctt 904 |||||||| ||||||||| Sbjct: 847 gtggtagaatgctttctt 864 >ref|NM_001048309.1| Oryza sativa (japonica cultivar-group) Os01g0106200 (Os01g0106200) mRNA, complete cds Length = 942 Score = 424 bits (214), Expect = e-115 Identities = 288/312 (92%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 415 ccgacggccccgccctccccacacgcggctccgacgagttcaagcccttcatcaggcgcc 474 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 405 ccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcc 464 Query: 475 taccagagttcaagttctggtatgcaatcacaaaagcttttgttatagcttttgtgatga 534 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 465 tccccgagttcaagttctggtatgcaatcacaaaagcttttcttatagcttttgtgatga 524 Query: 535 ctttcttctctgtatttgatgttcctgtcttctggcccatacttgtctgctactgggtcg 594 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | Sbjct: 525 ctttcttctctgtatttgatgttcctgtcttctggccgatacttctctgctactgggttg 584 Query: 595 ttcttttcatcctcacgatgaagcgccagattctgcacatgatcaaattcaaatatgtgc 654 ||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||| | Sbjct: 585 ttctttttgtcctcacgatgaagcgccagattgtgcacatgataaaatacaaatatgttc 644 Query: 655 ccttcaatatcgggaagcagaaatatggtgggaagaagagcggcacaagcagcggttctt 714 |||||| | ||||||||||||||||| ||||||||||||| || ||||| |||||| Sbjct: 645 ccttcagcgttgggaagcagaaatatggcgggaagaagagcg---caggcagcagttctt 701 Query: 715 caaaagactgat 726 | |||||||||| Sbjct: 702 cgaaagactgat 713 Score = 317 bits (160), Expect = 5e-83 Identities = 202/216 (93%) Strand = Plus / Plus Query: 189 gcggccaagtggcggacagacgcctcgcgggccttccagtactacctcgaccgctccacc 248 ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 167 gcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccacc 226 Query: 249 ccgcacgccacgggccgctggctcgccacgctcgccgtcgccgccatctacgcgctcagg 308 |||||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||| | Sbjct: 227 ccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgc 286 Query: 309 gtctacatggtccatggcttctacatcgtcacctacggcctcgggatctacctcctcaac 368 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctcctcaac 346 Query: 369 ctcctcatcggcttcctctcccccatggtcgacccc 404 |||||||||||||||||||||||||||||||||||| Sbjct: 347 ctcctcatcggcttcctctcccccatggtcgacccc 382 Score = 165 bits (83), Expect = 4e-37 Identities = 144/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 761 ggcaacaagatacagtcgatgatattccatgtgctaaataccaagtgtaatacttcattc 820 ||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||| Sbjct: 750 ggcaagaagatacagtcgatgatatttgatgtgctacataccaattgtaatatttcattc 809 Query: 821 gttatctagagctagaaggatattcacttatgtttctgacttggggtcacggtttaattt 880 | |||||||||||||||||||||||||| | |||| |||| || ||||||||||| || Sbjct: 810 at-atctagagctagaaggatattcacttgtatttcagactctggttcacggtttaaatt 868 Query: 881 gatattgtggtagagtgctttcttgtatgagtacatagtgtga 923 |||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 869 gatattgtggtagaatgctttcttggatgggtatatagtgtga 911 >dbj|AK060999.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F05, full insert sequence Length = 942 Score = 424 bits (214), Expect = e-115 Identities = 288/312 (92%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 415 ccgacggccccgccctccccacacgcggctccgacgagttcaagcccttcatcaggcgcc 474 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 405 ccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcc 464 Query: 475 taccagagttcaagttctggtatgcaatcacaaaagcttttgttatagcttttgtgatga 534 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 465 tccccgagttcaagttctggtatgcaatcacaaaagcttttcttatagcttttgtgatga 524 Query: 535 ctttcttctctgtatttgatgttcctgtcttctggcccatacttgtctgctactgggtcg 594 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | Sbjct: 525 ctttcttctctgtatttgatgttcctgtcttctggccgatacttctctgctactgggttg 584 Query: 595 ttcttttcatcctcacgatgaagcgccagattctgcacatgatcaaattcaaatatgtgc 654 ||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||| | Sbjct: 585 ttctttttgtcctcacgatgaagcgccagattgtgcacatgataaaatacaaatatgttc 644 Query: 655 ccttcaatatcgggaagcagaaatatggtgggaagaagagcggcacaagcagcggttctt 714 |||||| | ||||||||||||||||| ||||||||||||| || ||||| |||||| Sbjct: 645 ccttcagcgttgggaagcagaaatatggcgggaagaagagcg---caggcagcagttctt 701 Query: 715 caaaagactgat 726 | |||||||||| Sbjct: 702 cgaaagactgat 713 Score = 317 bits (160), Expect = 5e-83 Identities = 202/216 (93%) Strand = Plus / Plus Query: 189 gcggccaagtggcggacagacgcctcgcgggccttccagtactacctcgaccgctccacc 248 ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 167 gcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccacc 226 Query: 249 ccgcacgccacgggccgctggctcgccacgctcgccgtcgccgccatctacgcgctcagg 308 |||||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||| | Sbjct: 227 ccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgc 286 Query: 309 gtctacatggtccatggcttctacatcgtcacctacggcctcgggatctacctcctcaac 368 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 gtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctcctcaac 346 Query: 369 ctcctcatcggcttcctctcccccatggtcgacccc 404 |||||||||||||||||||||||||||||||||||| Sbjct: 347 ctcctcatcggcttcctctcccccatggtcgacccc 382 Score = 165 bits (83), Expect = 4e-37 Identities = 144/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 761 ggcaacaagatacagtcgatgatattccatgtgctaaataccaagtgtaatacttcattc 820 ||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||| Sbjct: 750 ggcaagaagatacagtcgatgatatttgatgtgctacataccaattgtaatatttcattc 809 Query: 821 gttatctagagctagaaggatattcacttatgtttctgacttggggtcacggtttaattt 880 | |||||||||||||||||||||||||| | |||| |||| || ||||||||||| || Sbjct: 810 at-atctagagctagaaggatattcacttgtatttcagactctggttcacggtttaaatt 868 Query: 881 gatattgtggtagagtgctttcttgtatgagtacatagtgtga 923 |||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 869 gatattgtggtagaatgctttcttggatgggtatatagtgtga 911 >gb|DQ246079.1| Zea mays clone 14671 mRNA sequence Length = 1115 Score = 321 bits (162), Expect = 3e-84 Identities = 288/330 (87%) Strand = Plus / Plus Query: 397 tcgacccctccgccccggccgacggccccgccctccccacacgcggctccgacgagttca 456 |||||||||||||| | ||||| || || || || ||||| || || || |||||||||| Sbjct: 398 tcgacccctccgccgccgccgaggggccggcgctgcccacccgggggtctgacgagttca 457 Query: 457 agcccttcatcaggcgcctaccagagttcaagttctggtatgcaatcacaaaagcttttg 516 |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 458 agcccttcatcaggcgtctccccgagttcaagttctggtatgcaatcacaaaagcttttg 517 Query: 517 ttatagcttttgtgatgactttcttctctgtatttgatgttcctgtcttctggcccatac 576 || |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 518 ttgtagcttttgtgatgactttcttctctgtgtttgacgttcctgtcttctggcctatac 577 Query: 577 ttgtctgctactgggtcgttcttttcatcctcacgatgaagcgccagattctgcacatga 636 | ||||||||||||| ||||| || |||| || ||||||||||||||| |||| |||| Sbjct: 578 tcctctgctactgggttgttctctttgtccttacaatgaagcgccagattgtgcatatga 637 Query: 637 tcaaattcaaatatgtgcccttcaatatcgggaagcagaaatatggtgggaagaagagcg 696 |||||| ||| |||||||| |||| ||||||||| |||||||| |||| ||||||||| | Sbjct: 638 tcaaatacaagtatgtgcctttcagtatcgggaaacagaaatacggtgtgaagaagagtg 697 Query: 697 gcacaagcagcggttcttcaaaagactgat 726 | |||||| | |||| || |||||||||| Sbjct: 698 tcgcaagcaccagttcctcgaaagactgat 727 Score = 246 bits (124), Expect = 1e-61 Identities = 193/216 (89%) Strand = Plus / Plus Query: 189 gcggccaagtggcggacagacgcctcgcgggccttccagtactacctcgaccgctccacc 248 |||||||||||||||| ||||| |||||| | |||||||||||||| ||||||||||| Sbjct: 178 gcggccaagtggcggagcgacgcgtcgcggtcgttccagtactacctggaccgctccacg 237 Query: 249 ccgcacgccacgggccgctggctcgccacgctcgccgtcgccgccatctacgcgctcagg 308 || ||||||||||| || ||||||| ||||||||||| ||| || ||||||||||| || Sbjct: 238 cctcacgccacggggcggtggctcggcacgctcgccgccgcggcaatctacgcgctgcgg 297 Query: 309 gtctacatggtccatggcttctacatcgtcacctacggcctcgggatctacctcctcaac 368 |||||||||| || ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 298 gtctacatggcgcagggcttctacattgtcacctacgggcttgggatctacctcctcaac 357 Query: 369 ctcctcatcggcttcctctcccccatggtcgacccc 404 ||||||||||| |||||||||||||||||||||||| Sbjct: 358 ctcctcatcggtttcctctcccccatggtcgacccc 393 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 317 bits (160), Expect = 5e-83 Identities = 202/216 (93%) Strand = Plus / Plus Query: 189 gcggccaagtggcggacagacgcctcgcgggccttccagtactacctcgaccgctccacc 248 ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| Sbjct: 318920 gcggccaagtggcggaccgatgcctcgcgggcgttccagtactacctggaccgctccacc 318979 Query: 249 ccgcacgccacgggccgctggctcgccacgctcgccgtcgccgccatctacgcgctcagg 308 |||||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||| | Sbjct: 318980 ccgcacgccacggggcgctggatcggcaccctcgccgtcgccgccatctacgccctccgc 319039 Query: 309 gtctacatggtccatggcttctacatcgtcacctacggcctcgggatctacctcctcaac 368 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319040 gtctacctcgtccagggcttctacatcgtcacctacggcctcgggatctacctcctcaac 319099 Query: 369 ctcctcatcggcttcctctcccccatggtcgacccc 404 |||||||||||||||||||||||||||||||||||| Sbjct: 319100 ctcctcatcggcttcctctcccccatggtcgacccc 319135 Score = 254 bits (128), Expect = 6e-64 Identities = 158/168 (94%) Strand = Plus / Plus Query: 493 ggtatgcaatcacaaaagcttttgttatagcttttgtgatgactttcttctctgtatttg 552 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 320467 ggtatgcaatcacaaaagcttttcttatagcttttgtgatgactttcttctctgtatttg 320526 Query: 553 atgttcctgtcttctggcccatacttgtctgctactgggtcgttcttttcatcctcacga 612 ||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||| Sbjct: 320527 atgttcctgtcttctggccgatacttctctgctactgggttgttctttttgtcctcacga 320586 Query: 613 tgaagcgccagattctgcacatgatcaaattcaaatatgtgcccttca 660 |||||||||||||| |||||||||| |||| ||||||||| ||||||| Sbjct: 320587 tgaagcgccagattgtgcacatgataaaatacaaatatgttcccttca 320634 Score = 165 bits (83), Expect = 4e-37 Identities = 144/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 761 ggcaacaagatacagtcgatgatattccatgtgctaaataccaagtgtaatacttcattc 820 ||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||| Sbjct: 321013 ggcaagaagatacagtcgatgatatttgatgtgctacataccaattgtaatatttcattc 321072 Query: 821 gttatctagagctagaaggatattcacttatgtttctgacttggggtcacggtttaattt 880 | |||||||||||||||||||||||||| | |||| |||| || ||||||||||| || Sbjct: 321073 at-atctagagctagaaggatattcacttgtatttcagactctggttcacggtttaaatt 321131 Query: 881 gatattgtggtagagtgctttcttgtatgagtacatagtgtga 923 |||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 321132 gatattgtggtagaatgctttcttggatgggtatatagtgtga 321174 Score = 137 bits (69), Expect = 1e-28 Identities = 78/81 (96%) Strand = Plus / Plus Query: 415 ccgacggccccgccctccccacacgcggctccgacgagttcaagcccttcatcaggcgcc 474 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 319158 ccgacggccccgccctccccacccgcggctccgacgagttcaagcccttcatcaggcgcc 319217 Query: 475 taccagagttcaagttctggt 495 | || |||||||||||||||| Sbjct: 319218 tccccgagttcaagttctggt 319238