BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf031n10 (1221 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059417.1| Oryza sativa (japonica cultivar-group) Os04g... 426 e-116 dbj|AB249661.1| Oryza sativa (japonica cultivar-group) OsRR1 mRN... 426 e-116 dbj|AK105815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116 dbj|AK072736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116 emb|AJ938070.1| Oryza sativa (indica cultivar-group) mRNA for Ty... 418 e-113 >ref|NM_001059417.1| Oryza sativa (japonica cultivar-group) Os04g0442300 (Os04g0442300) mRNA, complete cds Length = 1808 Score = 426 bits (215), Expect = e-116 Identities = 345/387 (89%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 334 gggggtgatgagggtgcttctggtggacgactccccggtggacaggagggtggtggagct 393 |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 379 gggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagct 438 Query: 394 gctgctcagcaaca---cctgcgccggctccttccacgttatcaccgtcgacagcgcgaa 450 || ||||||| || | ||||||||||| |||||||| ||| ||||||||||||| || Sbjct: 439 cctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaa 498 Query: 451 gaaggcgatggagctcctcgggttgaag---gaaggcaaggagcaggccatcgacatggt 507 |||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||||| Sbjct: 499 gaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggt 558 Query: 508 gctcactgactactgcatgcctgagatgaccggatatgacctcctcaaagccgtcaaggc 567 |||||| ||||||||||||||||||||||| || ||||| || ||||||||| ||||||| Sbjct: 559 gctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggc 618 Query: 568 gctgagccccctgatgacgatcccggtgatcgtcatgtcgtcggaaaacgagccccagag 627 ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 619 gctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagag 678 Query: 628 gatcagcagatgcttgaaagctggtgctgaagatttcattgtaaagcctctccagagcaa 687 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 679 gatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaa 738 Query: 688 ggatgtccagcgcctgaggaactgctc 714 ||| || ||||| || ||||||||||| Sbjct: 739 ggacgtacagcgtctcaggaactgctc 765 Score = 238 bits (120), Expect = 4e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 818 cacttcaccggaattgccatggtcctgcattcgtcgagcgtcgagctctcgcactacttc 877 |||||| | ||| |||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 896 cacttcgctggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttc 955 Query: 878 cccttcctcttcaagtccatcctgctggtgtacgccatcctgtgcctgggtgagctcctg 937 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 956 cctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctg 1015 Query: 938 cacagatggtcaaacggctgcttcctctccctgtggtgtgcttgacga 985 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1016 cacagatggtcaaacggctgcttcctcaacctgtggtgtgcttgacga 1063 Score = 93.7 bits (47), Expect = 2e-15 Identities = 126/149 (84%), Gaps = 10/149 (6%) Strand = Plus / Plus Query: 1080 ggtagattatttgctttgagaatctaaccgggcg-ttggttctt---ggcctttggctga 1135 |||||||| |||||||||||| ||||||| || | ||||||||| |||||||| ||| Sbjct: 1211 ggtagattgtttgctttgagattctaacctggagcttggttcttcttggcctttgattga 1270 Query: 1136 tgagaga--gaaggaagaacc----cttgtatccttgtacaaattgcataatgaagcagt 1189 |||||| | |||||||||| |||||||||||||||||| ||||||||| ||||| Sbjct: 1271 tgagaggagggaggaagaaccaatccttgtatccttgtacaaaaagcataatgaggcagt 1330 Query: 1190 atctgatgtcctttttggcttggatcttg 1218 |||||||||||||||||| | |||||||| Sbjct: 1331 atctgatgtcctttttggttgggatcttg 1359 >dbj|AB249661.1| Oryza sativa (japonica cultivar-group) OsRR1 mRNA for typeA response regulator 1, complete cds Length = 696 Score = 426 bits (215), Expect = e-116 Identities = 345/387 (89%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 334 gggggtgatgagggtgcttctggtggacgactccccggtggacaggagggtggtggagct 393 |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 15 gggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagct 74 Query: 394 gctgctcagcaaca---cctgcgccggctccttccacgttatcaccgtcgacagcgcgaa 450 || ||||||| || | ||||||||||| |||||||| ||| ||||||||||||| || Sbjct: 75 cctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaa 134 Query: 451 gaaggcgatggagctcctcgggttgaag---gaaggcaaggagcaggccatcgacatggt 507 |||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||||| Sbjct: 135 gaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggt 194 Query: 508 gctcactgactactgcatgcctgagatgaccggatatgacctcctcaaagccgtcaaggc 567 |||||| ||||||||||||||||||||||| || ||||| || ||||||||| ||||||| Sbjct: 195 gctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggc 254 Query: 568 gctgagccccctgatgacgatcccggtgatcgtcatgtcgtcggaaaacgagccccagag 627 ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 255 gctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagag 314 Query: 628 gatcagcagatgcttgaaagctggtgctgaagatttcattgtaaagcctctccagagcaa 687 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 315 gatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaa 374 Query: 688 ggatgtccagcgcctgaggaactgctc 714 ||| || ||||| || ||||||||||| Sbjct: 375 ggacgtacagcgtctcaggaactgctc 401 Score = 232 bits (117), Expect = 3e-57 Identities = 153/165 (92%) Strand = Plus / Plus Query: 818 cacttcaccggaattgccatggtcctgcattcgtcgagcgtcgagctctcgcactacttc 877 |||||| | ||| |||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 532 cacttcgctggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttc 591 Query: 878 cccttcctcttcaagtccatcctgctggtgtacgccatcctgtgcctgggtgagctcctg 937 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 592 cctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctg 651 Query: 938 cacagatggtcaaacggctgcttcctctccctgtggtgtgcttga 982 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 652 cacagatggtcaaacggctgcttcctcaacctgtggtgtgcttga 696 >dbj|AK105815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C10, full insert sequence Length = 1312 Score = 426 bits (215), Expect = e-116 Identities = 345/387 (89%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 334 gggggtgatgagggtgcttctggtggacgactccccggtggacaggagggtggtggagct 393 |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 181 gggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagct 240 Query: 394 gctgctcagcaaca---cctgcgccggctccttccacgttatcaccgtcgacagcgcgaa 450 || ||||||| || | ||||||||||| |||||||| ||| ||||||||||||| || Sbjct: 241 cctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaa 300 Query: 451 gaaggcgatggagctcctcgggttgaag---gaaggcaaggagcaggccatcgacatggt 507 |||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||||| Sbjct: 301 gaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggt 360 Query: 508 gctcactgactactgcatgcctgagatgaccggatatgacctcctcaaagccgtcaaggc 567 |||||| ||||||||||||||||||||||| || ||||| || ||||||||| ||||||| Sbjct: 361 gctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggc 420 Query: 568 gctgagccccctgatgacgatcccggtgatcgtcatgtcgtcggaaaacgagccccagag 627 ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 421 gctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagag 480 Query: 628 gatcagcagatgcttgaaagctggtgctgaagatttcattgtaaagcctctccagagcaa 687 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 481 gatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaa 540 Query: 688 ggatgtccagcgcctgaggaactgctc 714 ||| || ||||| || ||||||||||| Sbjct: 541 ggacgtacagcgtctcaggaactgctc 567 Score = 238 bits (120), Expect = 4e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 818 cacttcaccggaattgccatggtcctgcattcgtcgagcgtcgagctctcgcactacttc 877 |||||| | ||| |||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 698 cacttcgctggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttc 757 Query: 878 cccttcctcttcaagtccatcctgctggtgtacgccatcctgtgcctgggtgagctcctg 937 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 758 cctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctg 817 Query: 938 cacagatggtcaaacggctgcttcctctccctgtggtgtgcttgacga 985 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 818 cacagatggtcaaacggctgcttcctcaacctgtggtgtgcttgacga 865 Score = 93.7 bits (47), Expect = 2e-15 Identities = 126/149 (84%), Gaps = 10/149 (6%) Strand = Plus / Plus Query: 1080 ggtagattatttgctttgagaatctaaccgggcg-ttggttctt---ggcctttggctga 1135 |||||||| |||||||||||| ||||||| || | ||||||||| |||||||| ||| Sbjct: 1013 ggtagattgtttgctttgagattctaacctggagcttggttcttcttggcctttgattga 1072 Query: 1136 tgagaga--gaaggaagaacc----cttgtatccttgtacaaattgcataatgaagcagt 1189 |||||| | |||||||||| |||||||||||||||||| ||||||||| ||||| Sbjct: 1073 tgagaggagggaggaagaaccaatccttgtatccttgtacaaaaagcataatgaggcagt 1132 Query: 1190 atctgatgtcctttttggcttggatcttg 1218 |||||||||||||||||| | |||||||| Sbjct: 1133 atctgatgtcctttttggttgggatcttg 1161 >dbj|AK072736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D11, full insert sequence Length = 1808 Score = 426 bits (215), Expect = e-116 Identities = 345/387 (89%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 334 gggggtgatgagggtgcttctggtggacgactccccggtggacaggagggtggtggagct 393 |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 379 gggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagct 438 Query: 394 gctgctcagcaaca---cctgcgccggctccttccacgttatcaccgtcgacagcgcgaa 450 || ||||||| || | ||||||||||| |||||||| ||| ||||||||||||| || Sbjct: 439 cctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaa 498 Query: 451 gaaggcgatggagctcctcgggttgaag---gaaggcaaggagcaggccatcgacatggt 507 |||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||||| Sbjct: 499 gaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggt 558 Query: 508 gctcactgactactgcatgcctgagatgaccggatatgacctcctcaaagccgtcaaggc 567 |||||| ||||||||||||||||||||||| || ||||| || ||||||||| ||||||| Sbjct: 559 gctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggc 618 Query: 568 gctgagccccctgatgacgatcccggtgatcgtcatgtcgtcggaaaacgagccccagag 627 ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 619 gctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagag 678 Query: 628 gatcagcagatgcttgaaagctggtgctgaagatttcattgtaaagcctctccagagcaa 687 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 679 gatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaa 738 Query: 688 ggatgtccagcgcctgaggaactgctc 714 ||| || ||||| || ||||||||||| Sbjct: 739 ggacgtacagcgtctcaggaactgctc 765 Score = 238 bits (120), Expect = 4e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 818 cacttcaccggaattgccatggtcctgcattcgtcgagcgtcgagctctcgcactacttc 877 |||||| | ||| |||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 896 cacttcgctggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttc 955 Query: 878 cccttcctcttcaagtccatcctgctggtgtacgccatcctgtgcctgggtgagctcctg 937 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 956 cctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctg 1015 Query: 938 cacagatggtcaaacggctgcttcctctccctgtggtgtgcttgacga 985 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1016 cacagatggtcaaacggctgcttcctcaacctgtggtgtgcttgacga 1063 Score = 93.7 bits (47), Expect = 2e-15 Identities = 126/149 (84%), Gaps = 10/149 (6%) Strand = Plus / Plus Query: 1080 ggtagattatttgctttgagaatctaaccgggcg-ttggttctt---ggcctttggctga 1135 |||||||| |||||||||||| ||||||| || | ||||||||| |||||||| ||| Sbjct: 1211 ggtagattgtttgctttgagattctaacctggagcttggttcttcttggcctttgattga 1270 Query: 1136 tgagaga--gaaggaagaacc----cttgtatccttgtacaaattgcataatgaagcagt 1189 |||||| | |||||||||| |||||||||||||||||| ||||||||| ||||| Sbjct: 1271 tgagaggagggaggaagaaccaatccttgtatccttgtacaaaaagcataatgaggcagt 1330 Query: 1190 atctgatgtcctttttggcttggatcttg 1218 |||||||||||||||||| | |||||||| Sbjct: 1331 atctgatgtcctttttggttgggatcttg 1359 >emb|AJ938070.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 1 (rr1 gene) Length = 696 Score = 418 bits (211), Expect = e-113 Identities = 344/387 (88%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 334 gggggtgatgagggtgcttctggtggacgactccccggtggacaggagggtggtggagct 393 |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct: 15 gggggtgacgagggtgctgctggtggacgactcgccggtggacaggagggtggtgcagct 74 Query: 394 gctgctcagcaaca---cctgcgccggctccttccacgttatcaccgtcgacagcgcgaa 450 || ||||||| || | ||||||||||| |||||||| ||| ||||||||||||| || Sbjct: 75 cctcctcagcagcagcgcatgcgccggctcattccacgtaatcgccgtcgacagcgccaa 134 Query: 451 gaaggcgatggagctcctcgggttgaag---gaaggcaaggagcaggccatcgacatggt 507 |||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||||| Sbjct: 135 gaaggccatggagttcctcggcctcaaggaagaaggcaaggagcaggccatcgacatggt 194 Query: 508 gctcactgactactgcatgcctgagatgaccggatatgacctcctcaaagccgtcaaggc 567 |||||| ||||||||||||||||||||||| || ||||| || ||||||||| ||||||| Sbjct: 195 gctcaccgactactgcatgcctgagatgactggttatgagcttctcaaagccatcaaggc 254 Query: 568 gctgagccccctgatgacgatcccggtgatcgtcatgtcgtcggaaaacgagccccagag 627 ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 255 gctgagccctctgaagccgatcccagtgatcgtcatgtcgtcggaaaacgagccccagag 314 Query: 628 gatcagcagatgcttgaaagctggtgctgaagatttcattgtaaagcctctccagagcaa 687 ||||||||||||| |||| |||||||||||||||||||| ||||||||||| || ||||| Sbjct: 315 gatcagcagatgcatgaatgctggtgctgaagatttcatcgtaaagcctcttcaaagcaa 374 Query: 688 ggatgtccagcgcctgaggaactgctc 714 ||| || ||||| || ||||| ||||| Sbjct: 375 ggacgtacagcgtctcaggaagtgctc 401 Score = 240 bits (121), Expect = 1e-59 Identities = 154/165 (93%) Strand = Plus / Plus Query: 818 cacttcaccggaattgccatggtcctgcattcgtcgagcgtcgagctctcgcactacttc 877 |||||| ||||| |||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 532 cacttcgccggagttgccatggtcctgcactcgtcgagcgtcgagctgtcacattacttc 591 Query: 878 cccttcctcttcaagtccatcctgctggtgtacgccatcctgtgcctgggtgagctcctg 937 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 592 cctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgagctgctg 651 Query: 938 cacagatggtcaaacggctgcttcctctccctgtggtgtgcttga 982 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 652 cacagatggtcaaacggctgcttcctcaacctgtggtgtgcttga 696