BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf031k17 (1410 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060843.1| Oryza sativa (japonica cultivar-group) Os04g... 258 5e-65 dbj|AK101506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 1e-62 emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 113 2e-21 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 113 2e-21 emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 113 2e-21 >ref|NM_001060843.1| Oryza sativa (japonica cultivar-group) Os04g0684200 (Os04g0684200) mRNA, complete cds Length = 2324 Score = 258 bits (130), Expect = 5e-65 Identities = 355/430 (82%) Strand = Plus / Plus Query: 282 agactccatcttatgatcttatgggtatgccccatgatggtgcatcttctcttgaatcaa 341 |||||||||||||||| || |||| ||| |||| || ||||||| | ||| || | ||| Sbjct: 1285 agactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcat 1344 Query: 342 tgcatctctctcctcttgctgaagcttgctccagaaaggatttgactgcaatacatgaaa 401 ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||| Sbjct: 1345 tgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaa 1404 Query: 402 ttctagaaacaactggcaatagaaacgatgaggaaacaacaaatgagctctcttttcaga 461 | ||||||| || ||| | | | ||||||| |||| ||||||||||||| ||||||| Sbjct: 1405 tcctagaaaagacgggctacaaggatgatgagggaacagcaaatgagctctcatttcaga 1464 Query: 462 tgtggactaatcaaatgcaagctacaatgaactcaaagaagaagggcgataatgcatttc 521 ||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||| |||| Sbjct: 1465 tgtggaccaatcaaatgcaagatacattgaactcaaagaagaagggtgacaatgcttttc 1524 Query: 522 aacaaaatgattttactacggccatcgattgctactctcagttcattgttgttggtacca 581 |||||| || || || | || || || || || ||||||||||||| |||||||| | Sbjct: 1525 gacaaaaggacttctcttctgcaattgactgttattctcagttcattgaagttggtacga 1584 Query: 582 tgatttcgccaacaatttatgccaggcgttgcttgtcatacctcatgaatgtcatgccac 641 || |||| || || |||||||| |||||||| ||||||| || ||||||| || | || Sbjct: 1585 tggtttctccgaccatttatgcgcggcgttgcctgtcatatctgatgaatgacaaggcag 1644 Query: 642 aacaagctctgaatgatgacattcaggctctagtgatatctcctacatgcccgactgcat 701 |||||||||| | ||||| || || || ||||| |||||||| ||||| || ||||||| Sbjct: 1645 aacaagctctcagtgatgcgatgcaagcgctagtaatatctccaacatggccaactgcat 1704 Query: 702 tttatcttca 711 |||||||||| Sbjct: 1705 tttatcttca 1714 >dbj|AK101506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044N06, full insert sequence Length = 2325 Score = 250 bits (126), Expect = 1e-62 Identities = 354/430 (82%) Strand = Plus / Plus Query: 282 agactccatcttatgatcttatgggtatgccccatgatggtgcatcttctcttgaatcaa 341 |||||||||||||||| || |||| ||| |||| || ||||||| | ||| || | ||| Sbjct: 1286 agactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcat 1345 Query: 342 tgcatctctctcctcttgctgaagcttgctccagaaaggatttgactgcaatacatgaaa 401 ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||||| ||| Sbjct: 1346 tgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacataaaa 1405 Query: 402 ttctagaaacaactggcaatagaaacgatgaggaaacaacaaatgagctctcttttcaga 461 | ||||||| || ||| | | | ||||||| |||| ||||||||||||| ||||||| Sbjct: 1406 tcctagaaaagacgggctacaaggatgatgagggaacagcaaatgagctctcatttcaga 1465 Query: 462 tgtggactaatcaaatgcaagctacaatgaactcaaagaagaagggcgataatgcatttc 521 ||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||| |||| Sbjct: 1466 tgtggaccaatcaaatgcaagatacattgaactcaaagaagaagggtgacaatgcttttc 1525 Query: 522 aacaaaatgattttactacggccatcgattgctactctcagttcattgttgttggtacca 581 |||||| || || || | || || || || || ||||||||||||| |||||||| | Sbjct: 1526 gacaaaaggacttctcttctgcaattgactgttattctcagttcattgaagttggtacga 1585 Query: 582 tgatttcgccaacaatttatgccaggcgttgcttgtcatacctcatgaatgtcatgccac 641 || |||| || || |||||||| |||||||| ||||||| || ||||||| || | || Sbjct: 1586 tggtttctccgaccatttatgcgcggcgttgcctgtcatatctgatgaatgacaaggcag 1645 Query: 642 aacaagctctgaatgatgacattcaggctctagtgatatctcctacatgcccgactgcat 701 |||||||||| | ||||| || || || ||||| |||||||| ||||| || ||||||| Sbjct: 1646 aacaagctctcagtgatgcgatgcaagcgctagtaatatctccaacatggccaactgcat 1705 Query: 702 tttatcttca 711 |||||||||| Sbjct: 1706 tttatcttca 1715 >emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 113 bits (57), Expect = 2e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 282 agactccatcttatgatcttatgggtatgccccatgatggtgcatcttctcttgaatcaa 341 |||||||||||||||| || |||| ||| |||| || ||||||| | ||| || | ||| Sbjct: 12644 agactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcat 12703 Query: 342 tgcatctctctcctcttgctgaagcttgctccagaaaggatttgactgcaatacatgaaa 401 ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||| Sbjct: 12704 tgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaa 12763 Query: 402 ttctagaaa 410 | ||||||| Sbjct: 12764 tcctagaaa 12772 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 447 agctctcttttcagatgtggactaatcaaatgcaagctacaatgaactcaaagaagaagg 506 ||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||||| Sbjct: 13402 agctctcatttcagatgtggaccaatcaaatgcaagatacattgaactcaaagaagaagg 13461 Query: 507 gcgataatgcatttcaacaaaa 528 | || ||||| |||| |||||| Sbjct: 13462 gtgacaatgcttttcgacaaaa 13483 Score = 87.7 bits (44), Expect = 1e-13 Identities = 125/152 (82%) Strand = Plus / Plus Query: 560 cagttcattgttgttggtaccatgatttcgccaacaatttatgccaggcgttgcttgtca 619 |||||||||| |||||||| ||| |||| || || |||||||| |||||||| ||||| Sbjct: 13771 cagttcattgaagttggtacgatggtttctccgaccatttatgcgcggcgttgcctgtca 13830 Query: 620 tacctcatgaatgtcatgccacaacaagctctgaatgatgacattcaggctctagtgata 679 || || ||||||| || | || |||||||||| | ||||| || || || ||||| ||| Sbjct: 13831 tatctgatgaatgacaaggcagaacaagctctcagtgatgcgatgcaagcgctagtaata 13890 Query: 680 tctcctacatgcccgactgcattttatcttca 711 ||||| ||||| || ||||||||||||||||| Sbjct: 13891 tctccaacatggccaactgcattttatcttca 13922 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 113 bits (57), Expect = 2e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 282 agactccatcttatgatcttatgggtatgccccatgatggtgcatcttctcttgaatcaa 341 |||||||||||||||| || |||| ||| |||| || ||||||| | ||| || | ||| Sbjct: 34982475 agactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcat 34982534 Query: 342 tgcatctctctcctcttgctgaagcttgctccagaaaggatttgactgcaatacatgaaa 401 ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||| Sbjct: 34982535 tgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaa 34982594 Query: 402 ttctagaaa 410 | ||||||| Sbjct: 34982595 tcctagaaa 34982603 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 447 agctctcttttcagatgtggactaatcaaatgcaagctacaatgaactcaaagaagaagg 506 ||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||||| Sbjct: 34983233 agctctcatttcagatgtggaccaatcaaatgcaagatacattgaactcaaagaagaagg 34983292 Query: 507 gcgataatgcatttcaacaaaa 528 | || ||||| |||| |||||| Sbjct: 34983293 gtgacaatgcttttcgacaaaa 34983314 Score = 87.7 bits (44), Expect = 1e-13 Identities = 125/152 (82%) Strand = Plus / Plus Query: 560 cagttcattgttgttggtaccatgatttcgccaacaatttatgccaggcgttgcttgtca 619 |||||||||| |||||||| ||| |||| || || |||||||| |||||||| ||||| Sbjct: 34983602 cagttcattgaagttggtacgatggtttctccgaccatttatgcgcggcgttgcctgtca 34983661 Query: 620 tacctcatgaatgtcatgccacaacaagctctgaatgatgacattcaggctctagtgata 679 || || ||||||| || | || |||||||||| | ||||| || || || ||||| ||| Sbjct: 34983662 tatctgatgaatgacaaggcagaacaagctctcagtgatgcgatgcaagcgctagtaata 34983721 Query: 680 tctcctacatgcccgactgcattttatcttca 711 ||||| ||||| || ||||||||||||||||| Sbjct: 34983722 tctccaacatggccaactgcattttatcttca 34983753 >emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 113 bits (57), Expect = 2e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 282 agactccatcttatgatcttatgggtatgccccatgatggtgcatcttctcttgaatcaa 341 |||||||||||||||| || |||| ||| |||| || ||||||| | ||| || | ||| Sbjct: 41525 agactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcat 41584 Query: 342 tgcatctctctcctcttgctgaagcttgctccagaaaggatttgactgcaatacatgaaa 401 ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||| Sbjct: 41585 tgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaa 41644 Query: 402 ttctagaaa 410 | ||||||| Sbjct: 41645 tcctagaaa 41653 Score = 99.6 bits (50), Expect = 3e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 447 agctctcttttcagatgtggactaatcaaatgcaagctacaatgaactcaaagaagaagg 506 ||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||||| Sbjct: 42283 agctctcatttcagatgtggaccaatcaaatgcaagatacattgaactcaaagaagaagg 42342 Query: 507 gcgataatgcatttcaacaaaa 528 | || ||||| |||| |||||| Sbjct: 42343 gtgacaatgcttttcgacaaaa 42364 Score = 87.7 bits (44), Expect = 1e-13 Identities = 125/152 (82%) Strand = Plus / Plus Query: 560 cagttcattgttgttggtaccatgatttcgccaacaatttatgccaggcgttgcttgtca 619 |||||||||| |||||||| ||| |||| || || |||||||| |||||||| ||||| Sbjct: 42652 cagttcattgaagttggtacgatggtttctccgaccatttatgcgcggcgttgcctgtca 42711 Query: 620 tacctcatgaatgtcatgccacaacaagctctgaatgatgacattcaggctctagtgata 679 || || ||||||| || | || |||||||||| | ||||| || || || ||||| ||| Sbjct: 42712 tatctgatgaatgacaaggcagaacaagctctcagtgatgcgatgcaagcgctagtaata 42771 Query: 680 tctcctacatgcccgactgcattttatcttca 711 ||||| ||||| || ||||||||||||||||| Sbjct: 42772 tctccaacatggccaactgcattttatcttca 42803