BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf031h20 (1064 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein m... 392 e-105 ref|NM_001073782.1| Oryza sativa (japonica cultivar-group) Os12g... 381 e-102 dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102 gb|AY112520.1| Zea mays CL889_1 mRNA sequence 329 1e-86 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 143 2e-30 >gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein mRNA, partial cds Length = 465 Score = 392 bits (198), Expect = e-105 Identities = 396/460 (86%), Gaps = 14/460 (3%) Strand = Plus / Plus Query: 258 tgccacgcggtcaccagcacgcagcctccagg-aatgg-agatggctcagcttatatgtg 315 ||||| || ||||||| | ||| ||||||||| ||||| | ||||||||||||||||| | Sbjct: 5 tgccatgccgtcaccaacgcgccgcctccaggnaatggnaaatggctcagcttatatgcg 64 Query: 316 gtggctgtcgaactttattgatgtatactcgcaatgcgacgactgttagatgctcatgtt 375 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 65 tcggctgtcgaactttattgatgtatactcgcaatgcaactactgtcagatgctcatgtt 124 Query: 376 gtgatacagtcaatcttgtcag---------gccagtgagtagtatagctcatgtgaact 426 ||||||||||||| |||| ||| |||||||| |||||||||||||||||||| Sbjct: 125 gtgatacagtcaaccttgccagaccagcaccgccagtgaatagtatagctcatgtgaact 184 Query: 427 gcggccagtgccacacagtgttaatgtatccatatggagcaccctctgtcaaatgtgcta 486 | ||||||||||| || |||||||||||||||||||||||| | || ||||||||||||| Sbjct: 185 gtggccagtgccaaacggtgttaatgtatccatatggagcatcttcggtcaaatgtgcta 244 Query: 487 tctgcaattttattacgaatattggaatgaatgctgcgaggcct---ccacctacagtgc 543 |||||||||||||||| || ||||||||||| | | ||| ||| ||||||||| ||| Sbjct: 245 tctgcaattttattacaaacattggaatgaacaccgtgagacctttgccacctacaatgc 304 Query: 544 ctgcaccaaatggaacctcatatagtgtcccatcaacttctgctccaaccgctcaatcac 603 ||||||||| |||| || |||||||||||||| |||||||| ||| |||||||||| | Sbjct: 305 atgcaccaaacggaatttcttatagtgtcccatcgacttctgcgccatccgctcaatcgc 364 Query: 604 agaatgtaactgttgtcgtcgaaaatccaatgacagtagacgacaagggaaaattggtta 663 |||||||||| || ||||||||||| |||||||||||||| |||||||| |||||||| | Sbjct: 365 agaatgtaacggtggtcgtcgaaaacccaatgacagtagatgacaaggggaaattggtga 424 Query: 664 gcaatgttgtagttggggttacaactggtgggaaaaagta 703 |||| || ||||| ||||||||| | || ||||||||||| Sbjct: 425 gcaacgtcgtagtcggggttacatccggcgggaaaaagta 464 >ref|NM_001073782.1| Oryza sativa (japonica cultivar-group) Os12g0611000 (Os12g0611000) mRNA, complete cds Length = 1180 Score = 381 bits (192), Expect = e-102 Identities = 316/355 (89%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 167 ttcttgaggcatgcagagccagatcgtgtgccatgggtgcaggagcgttctactctaccc 226 |||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||| Sbjct: 205 ttctcgaggcatgcagagccagatcgtgtgccatgggtgcaggaacattctgctctaccc 264 Query: 227 tagaggggccccgagcgtgtgctgcgcggtatgccacgcggtcaccagcac-gcagc--c 283 |||||||| |||||||| ||||||||||| ||||| || || ||||||| ||| | | Sbjct: 265 gagaggggcaccgagcgtttgctgcgcggtgtgccatgccgtgtccagcacagcaccgtc 324 Query: 284 tccaggaatggagatggctcagcttatatgtggtggctgtcgaactttattgatgtatac 343 |||||||||||| || ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 325 tccaggaatggatatagctcatcttatatgtggtggatgccgaactttattgatgtatac 384 Query: 344 tcgcaatgcgacgactgttagatgctcatgttgtgatacagtcaatcttgtcaggccagt 403 |||||||||||| |||||||||| || || || |||||||||||||||||||| ||||| Sbjct: 385 tcgcaatgcgacatctgttagatgttcgtgctgcgatacagtcaatcttgtcagaccagt 444 Query: 404 gagtagtatagctcatgtgaactgcggccagtgccacacagtgttaatgtatccatatgg 463 ||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 445 gagtagtatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacgg 504 Query: 464 agcaccctctgtcaaatgtgctatctgcaattttattacgaatattggaatgaat 518 |||||| |||||||| ||||||||||||||||||||||| |||| ||| |||||| Sbjct: 505 agcaccttctgtcaagtgtgctatctgcaattttattacaaatactgggatgaat 559 Score = 188 bits (95), Expect = 3e-44 Identities = 146/163 (89%) Strand = Plus / Plus Query: 547 caccaaatggaacctcatatagtgtcccatcaacttctgctccaaccgctcaatcacaga 606 ||||||||||||| ||||||| || ||||||||| |||||||||||| |||||||||||| Sbjct: 576 caccaaatggaacttcatatactgccccatcaacctctgctccaaccactcaatcacaga 635 Query: 607 atgtaactgttgtcgtcgaaaatccaatgacagtagacgacaagggaaaattggttagca 666 |||| |||||||| || |||||||| ||||| ||||| | |||||||| ||||| |||| Sbjct: 636 atgttactgttgttgttgaaaatcctatgacggtagatgcaaagggaaagttggtgagca 695 Query: 667 atgttgtagttggggttacaactggtgggaaaaagtaacatat 709 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 696 acgttgtagttggggttacaactggtggtaaaaagtaacatat 738 Score = 89.7 bits (45), Expect = 2e-14 Identities = 127/151 (84%), Gaps = 5/151 (3%) Strand = Plus / Plus Query: 811 aaaacaaagtgcgggtgtggatactgaga-actgtagtttgttttacccttgattctttt 869 |||||||| ||| |||||| ||||||||| ||||||||||||| |||| |||||||||| Sbjct: 884 aaaacaaactgcaggtgtgaatactgagatactgtagtttgtt--acccctgattctttt 941 Query: 870 gtatgtaatttggg--ctctgttagaccttactgtgtgatcaaatcctgtcctgagagct 927 ||||||||| || | ||||||| || ||| |||||||||||||| | ||| || || Sbjct: 942 gtatgtaatatgagagctctgttggattttattgtgtgatcaaatcatctccagatggca 1001 Query: 928 ctcgctgccttctcaatgaatagcaacagat 958 || ||||||||||||||||||| ||||||| Sbjct: 1002 ctagctgccttctcaatgaataataacagat 1032 >dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139G05, full insert sequence Length = 1182 Score = 381 bits (192), Expect = e-102 Identities = 316/355 (89%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 167 ttcttgaggcatgcagagccagatcgtgtgccatgggtgcaggagcgttctactctaccc 226 |||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||| Sbjct: 206 ttctcgaggcatgcagagccagatcgtgtgccatgggtgcaggaacattctgctctaccc 265 Query: 227 tagaggggccccgagcgtgtgctgcgcggtatgccacgcggtcaccagcac-gcagc--c 283 |||||||| |||||||| ||||||||||| ||||| || || ||||||| ||| | | Sbjct: 266 gagaggggcaccgagcgtttgctgcgcggtgtgccatgccgtgtccagcacagcaccgtc 325 Query: 284 tccaggaatggagatggctcagcttatatgtggtggctgtcgaactttattgatgtatac 343 |||||||||||| || ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 326 tccaggaatggatatagctcatcttatatgtggtggatgccgaactttattgatgtatac 385 Query: 344 tcgcaatgcgacgactgttagatgctcatgttgtgatacagtcaatcttgtcaggccagt 403 |||||||||||| |||||||||| || || || |||||||||||||||||||| ||||| Sbjct: 386 tcgcaatgcgacatctgttagatgttcgtgctgcgatacagtcaatcttgtcagaccagt 445 Query: 404 gagtagtatagctcatgtgaactgcggccagtgccacacagtgttaatgtatccatatgg 463 ||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||| || Sbjct: 446 gagtagtatagctcacttgaactgtggccagtgccagacagtgttgatgtatccatacgg 505 Query: 464 agcaccctctgtcaaatgtgctatctgcaattttattacgaatattggaatgaat 518 |||||| |||||||| ||||||||||||||||||||||| |||| ||| |||||| Sbjct: 506 agcaccttctgtcaagtgtgctatctgcaattttattacaaatactgggatgaat 560 Score = 188 bits (95), Expect = 3e-44 Identities = 146/163 (89%) Strand = Plus / Plus Query: 547 caccaaatggaacctcatatagtgtcccatcaacttctgctccaaccgctcaatcacaga 606 ||||||||||||| ||||||| || ||||||||| |||||||||||| |||||||||||| Sbjct: 577 caccaaatggaacttcatatactgccccatcaacctctgctccaaccactcaatcacaga 636 Query: 607 atgtaactgttgtcgtcgaaaatccaatgacagtagacgacaagggaaaattggttagca 666 |||| |||||||| || |||||||| ||||| ||||| | |||||||| ||||| |||| Sbjct: 637 atgttactgttgttgttgaaaatcctatgacggtagatgcaaagggaaagttggtgagca 696 Query: 667 atgttgtagttggggttacaactggtgggaaaaagtaacatat 709 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 697 acgttgtagttggggttacaactggtggtaaaaagtaacatat 739 Score = 89.7 bits (45), Expect = 2e-14 Identities = 127/151 (84%), Gaps = 5/151 (3%) Strand = Plus / Plus Query: 811 aaaacaaagtgcgggtgtggatactgaga-actgtagtttgttttacccttgattctttt 869 |||||||| ||| |||||| ||||||||| ||||||||||||| |||| |||||||||| Sbjct: 885 aaaacaaactgcaggtgtgaatactgagatactgtagtttgtt--acccctgattctttt 942 Query: 870 gtatgtaatttggg--ctctgttagaccttactgtgtgatcaaatcctgtcctgagagct 927 ||||||||| || | ||||||| || ||| |||||||||||||| | ||| || || Sbjct: 943 gtatgtaatatgagagctctgttggattttattgtgtgatcaaatcatctccagatggca 1002 Query: 928 ctcgctgccttctcaatgaatagcaacagat 958 || ||||||||||||||||||| ||||||| Sbjct: 1003 ctagctgccttctcaatgaataataacagat 1033 >gb|AY112520.1| Zea mays CL889_1 mRNA sequence Length = 1158 Score = 329 bits (166), Expect = 1e-86 Identities = 301/346 (86%) Strand = Plus / Plus Query: 166 gttcttgaggcatgcagagccagatcgtgtgccatgggtgcaggagcgttctactctacc 225 ||||||||| ||||||||||||||| |||||||| |||||||||| | |||| |||||| Sbjct: 126 gttcttgagacatgcagagccagatagtgtgccacgggtgcaggacccttctgttctacc 185 Query: 226 ctagaggggccccgagcgtgtgctgcgcggtatgccacgcggtcaccagcacgcagcctc 285 | ||||| || ||||||||||| || ||||||||||| | |||||||| || ||||| Sbjct: 186 caagaggtgctccgagcgtgtgttgtgcggtatgccatgtggtcaccaatgtgccgcctc 245 Query: 286 caggaatggagatggctcagcttatatgtggtggctgtcgaactttattgatgtatactc 345 ||| |||||||||||||| ||||||||||||||||| | || |||||||||||| ||| Sbjct: 246 cagcaatggagatggctcgacttatatgtggtggctgccagacattattgatgtatgctc 305 Query: 346 gcaatgcgacgactgttagatgctcatgttgtgatacagtcaatcttgtcaggccagtga 405 ||| ||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 306 gcagtgcaacaactgtaagatgctcatgttgtgacacagtcaatcttgtcagaccagtga 365 Query: 406 gtagtatagctcatgtgaactgcggccagtgccacacagtgttaatgtatccatatggag 465 |||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||| Sbjct: 366 gtagcatagctcatgtgaactgtggccagtgccaaacagtgttgatgtatccatacggag 425 Query: 466 caccctctgtcaaatgtgctatctgcaattttattacgaatattgg 511 |||| ||||||||||||||| | ||||| || ||||| ||| |||| Sbjct: 426 caccgtctgtcaaatgtgctgtttgcaacttcattacaaatgttgg 471 Score = 113 bits (57), Expect = 1e-21 Identities = 75/81 (92%) Strand = Plus / Plus Query: 605 gaatgtaactgttgtcgtcgaaaatccaatgacagtagacgacaagggaaaattggttag 664 |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| || Sbjct: 574 gaatgtaactgttgtcgttgaaaacccaatgacagtagatgacaagggaaaattggtgag 633 Query: 665 caatgttgtagttggggttac 685 |||||| ||||| |||||||| Sbjct: 634 caatgtcgtagtaggggttac 654 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 143 bits (72), Expect = 2e-30 Identities = 99/108 (91%) Strand = Plus / Minus Query: 400 cagtgagtagtatagctcatgtgaactgcggccagtgccacacagtgttaatgtatccat 459 ||||||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||| Sbjct: 25849868 cagtgagtagtatagctcacttgaactgtggccagtgccagacagtgttgatgtatccat 25849809 Query: 460 atggagcaccctctgtcaaatgtgctatctgcaattttattacgaata 507 | |||||||| |||||||| ||||||||||||||||||||||| |||| Sbjct: 25849808 acggagcaccttctgtcaagtgtgctatctgcaattttattacaaata 25849761 Score = 137 bits (69), Expect = 1e-28 Identities = 105/117 (89%) Strand = Plus / Minus Query: 286 caggaatggagatggctcagcttatatgtggtggctgtcgaactttattgatgtatactc 345 |||||||||| || ||||| |||||||||||||| || |||||||||||||||||||||| Sbjct: 25850764 caggaatggatatagctcatcttatatgtggtggatgccgaactttattgatgtatactc 25850705 Query: 346 gcaatgcgacgactgttagatgctcatgttgtgatacagtcaatcttgtcaggccag 402 |||||||||| |||||||||| || || || |||||||||||||||||||| |||| Sbjct: 25850704 gcaatgcgacatctgttagatgttcgtgctgcgatacagtcaatcttgtcagaccag 25850648 Score = 123 bits (62), Expect = 2e-24 Identities = 83/90 (92%) Strand = Plus / Minus Query: 173 aggcatgcagagccagatcgtgtgccatgggtgcaggagcgttctactctaccctagagg 232 |||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||| Sbjct: 25851854 aggcatgcagagccagatcgtgtgccatgggtgcaggaacattctgctctacccgagagg 25851795 Query: 233 ggccccgagcgtgtgctgcgcggtatgcca 262 ||| |||||||| ||||||||||| ||||| Sbjct: 25851794 ggcaccgagcgtttgctgcgcggtgtgcca 25851765 Score = 89.7 bits (45), Expect = 2e-14 Identities = 127/151 (84%), Gaps = 5/151 (3%) Strand = Plus / Minus Query: 811 aaaacaaagtgcgggtgtggatactgaga-actgtagtttgttttacccttgattctttt 869 |||||||| ||| |||||| ||||||||| ||||||||||||| |||| |||||||||| Sbjct: 25849129 aaaacaaactgcaggtgtgaatactgagatactgtagtttgtt--acccctgattctttt 25849072 Query: 870 gtatgtaatttggg--ctctgttagaccttactgtgtgatcaaatcctgtcctgagagct 927 ||||||||| || | ||||||| || ||| |||||||||||||| | ||| || || Sbjct: 25849071 gtatgtaatatgagagctctgttggattttattgtgtgatcaaatcatctccagatggca 25849012 Query: 928 ctcgctgccttctcaatgaatagcaacagat 958 || ||||||||||||||||||| ||||||| Sbjct: 25849011 ctagctgccttctcaatgaataataacagat 25848981 Score = 77.8 bits (39), Expect = 8e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 663 agcaatgttgtagttggggttacaactggtgggaaaaagtaacatat 709 ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 25849321 agcaacgttgtagttggggttacaactggtggtaaaaagtaacatat 25849275