BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf031b06 (897 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT833086.1| Oryza sativa (indica cultivar-group) cDNA clone:... 694 0.0 ref|NM_001060556.1| Oryza sativa (japonica cultivar-group) Os04g... 688 0.0 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 684 0.0 emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 684 0.0 dbj|AK064789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 680 0.0 >emb|CT833086.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110G20, full insert sequence Length = 1513 Score = 694 bits (350), Expect = 0.0 Identities = 626/712 (87%), Gaps = 17/712 (2%) Strand = Plus / Plus Query: 189 ccgccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggcggaaaga 248 ||||||| ||| ||||||||||| | | |||||||||||||||||||||||| || |||| Sbjct: 809 ccgccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaaga 868 Query: 249 agagtgatgaggctgctcctactgatgctggcgatgaagatggaggtgatgacgacgggg 308 |||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||| Sbjct: 869 agagtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacgggg 928 Query: 309 atgaggatggtgaccttggggagggcgaagaggacatctcggaaggtgaggggtatgaca 368 | |||||||||||| ||||||| |||||||||||| | || ||||||||||| ||||| | Sbjct: 929 acgaggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgata 988 Query: 369 atcccaagggcaatgaagacaagaagaaacaaagaggtgagggtgaggagaatggtgagg 428 |||| || |||| || |||| |||| ||||||||||| |||||| |||||||||| Sbjct: 989 atccaaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgagg 1045 Query: 429 aggatgaggaagaacctgatgaccaggagggtggtggaggtgacggtgacgacgacgacg 488 ||||||||||||| ||||| | ||||||||||||||||||||| ||||||||| || | Sbjct: 1046 aggatgaggaagagcctgaaggccaggagggtggtggaggtga---tgacgacgatgatg 1102 Query: 489 atgacgacgacaatgaggatgacgacgac---gatgacggtgatgatgatgatgaggaag 545 |||| || ||||||||||||||||||||| ||||| |||| ||| |||||||| | || Sbjct: 1103 atgatgatgacaatgaggatgacgacgacgatgatgatggtggtgaagatgatgatggag 1162 Query: 546 tagaagaggaagaagatgaccaggacaacgaggatgaggaggaagatgatgatgaagact 605 |||| |||||||| || || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 1163 tagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaagact 1222 Query: 606 cactccagcccccaaagaagaggaagaagtgaagctcttcaatgcggctttagttaccaa 665 |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 1223 cacttcagcccccaaagaagaggaagaagtgaatatcttc-atgcggctatagttaccaa 1281 Query: 666 cttaccatgcgctgagctgtgcatggttttcgtcatgttctcggaatcgaacttgccttt 725 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1282 cttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgcatta 1341 Query: 726 tagagtt-----aaaaaggctccacactatcagtacgtgtgggcttgtaggagctttatg 780 ||||| |||| |||||||||| ||||||||||||| |||||||||||||||| Sbjct: 1342 gggagttaagaaaaaagggctccacacgttcagtacgtgtggatttgtaggagctttatg 1401 Query: 781 atttgaagcaattagagagaactct-atgtcattgttgcttgcttctgtggagttgaaca 839 |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1402 atttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttgaaca 1461 Query: 840 gatgtttcgctaacatatttcgacctgagtggtgaaa-cctcaagattgaat 890 ||||||||||||||||| |||||||||| |||||||| ||| |||||||||| Sbjct: 1462 gatgtttcgctaacataattcgacctgaatggtgaaagcctgaagattgaat 1513 >ref|NM_001060556.1| Oryza sativa (japonica cultivar-group) Os04g0636800 (Os04g0636800) mRNA, partial cds Length = 928 Score = 688 bits (347), Expect = 0.0 Identities = 613/697 (87%), Gaps = 16/697 (2%) Strand = Plus / Plus Query: 189 ccgccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggcggaaaga 248 ||||||| ||| ||||||||||| | | |||||||||||||||||||||||| || |||| Sbjct: 227 ccgccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaaga 286 Query: 249 agagtgatgaggctgctcctactgatgctggcgatgaagatggaggtgatgacgacgggg 308 |||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||| Sbjct: 287 agagtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacgggg 346 Query: 309 atgaggatggtgaccttggggagggcgaagaggacatctcggaaggtgaggggtatgaca 368 | |||||||||||| ||||||| |||||||||||| | || ||||||||||| ||||| | Sbjct: 347 acgaggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgata 406 Query: 369 atcccaagggcaatgaagacaagaagaaacaaagaggtgagggtgaggagaatggtgagg 428 |||| || |||| || |||| |||| ||||||||||| |||||| |||||||||| Sbjct: 407 atccaaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgagg 463 Query: 429 aggatgaggaagaacctgatgaccaggagggtggtggaggtgacggtgacgacgacgacg 488 ||||||||||||| ||||| | ||||||||||||||||||||| ||||||||| |||| Sbjct: 464 aggatgaggaagagcctgaaggccaggagggtggtggaggtga---tgacgacgatgacg 520 Query: 489 atgacgacgacaatgaggatgacgacgac---gatgacggtgatgatgatgatgaggaag 545 |||| || ||||||||||||||||||||| ||||| |||| ||| |||||||| | || Sbjct: 521 atgatgatgacaatgaggatgacgacgacgatgatgatggtggtgaagatgatgatggag 580 Query: 546 tagaagaggaagaagatgaccaggacaacgaggatgaggaggaagatgatgatgaagact 605 |||| |||||||| || || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 581 tagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaagact 640 Query: 606 cactccagcccccaaagaagaggaagaagtgaagctcttcaatgcggctttagttaccaa 665 |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 641 cacttcagcccccaaagaagaggaagaagtgaatatcttc-atgcggctatagttaccaa 699 Query: 666 cttaccatgcgctgagctgtgcatggttttcgtcatgttctcggaatcgaacttgccttt 725 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 700 cttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgcatta 759 Query: 726 tagagtt-----aaaaaggctccacactatcagtacgtgtgggcttgtaggagctttatg 780 ||||| |||| |||||||||| |||||| |||||| |||||||||||||||| Sbjct: 760 gggagttaagaaaaaagggctccacacgttcagtaagtgtggatttgtaggagctttatg 819 Query: 781 atttgaagcaattagagagaactct-atgtcattgttgcttgcttctgtggagttgaaca 839 |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 820 atttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttgaaca 879 Query: 840 gatgtttcgctaacatatttcgacctgagtggtgaaa 876 ||||||||||||||||| |||||||||| |||||||| Sbjct: 880 gatgtttcgctaacataattcgacctgaatggtgaaa 916 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 684 bits (345), Expect = 0.0 Identities = 615/699 (87%), Gaps = 17/699 (2%) Strand = Plus / Minus Query: 204 agggtcctatctgtgatatgcctgacttcaagatgggcggaaagaagagtgatgaggctg 263 |||||||| | | |||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 32418586 agggtcctgtatttgatatgcctgacttcaagatgggtgggaagaagagtgatgatgctg 32418527 Query: 264 ctcctactgatgctggcgatgaagatggaggtgatgacgacggggatgaggatggtgacc 323 |||| |||||||| || ||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 32418526 ctcccactgatgccggggatgaagatggtggtgatgatgacggggacgaggatggtgact 32418467 Query: 324 ttggggagggcgaagaggacatctcggaaggtgaggggtatgacaatcccaagggcaatg 383 ||||||| |||||||||||| | || ||||||||||| ||||| ||||| || |||| | Sbjct: 32418466 ttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatccaaaaggcatcg 32418407 Query: 384 aagacaagaagaaacaaagaggtgagggtgaggagaatggtgaggaggatgaggaagaac 443 | |||| |||| ||||||||||| |||||| ||||||||||||||||||||||| | Sbjct: 32418406 ataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggaggatgaggaagagc 32418350 Query: 444 ctgatgaccaggagggtggtggaggtgacggtgacgacgacgacgatgacgacgacaatg 503 |||| | ||||||||||||||||||||| ||||||||| |||||||| || ||||||| Sbjct: 32418349 ctgaaggccaggagggtggtggaggtga---tgacgacgatgacgatgatgatgacaatg 32418293 Query: 504 aggatgacgacgac---gatgacggtgatgatgatgatgaggaagtagaagaggaagaag 560 |||||||||||||| ||||| |||| ||| |||||||| | |||||| |||||||| | Sbjct: 32418292 aggatgacgacgacgatgatgatggtggtgaagatgatgatggagtagatgaggaagagg 32418233 Query: 561 atgaccaggacaacgaggatgaggaggaagatgatgatgaagactcactccagcccccaa 620 | || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 32418232 aagatcaggacaatgaggatgatgaggaagatgatgatgaagactcacttcagcccccaa 32418173 Query: 621 agaagaggaagaagtgaagctcttcaatgcggctttagttaccaacttaccatgcgctga 680 |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 32418172 agaagaggaagaagtgaatatcttc-atgcggctatagttaccaacttaccatgcgctga 32418114 Query: 681 gctgtgcatggttttcgtcatgttctcggaatcgaacttgccttttagagtt-----aaa 735 ||||||| ||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 32418113 gctgtgcttggttttcgtcatgttctcggaatcgaacttgcattagggagttaagaaaaa 32418054 Query: 736 aaggctccacactatcagtacgtgtgggcttgtaggagctttatgatttgaagcaattag 795 | |||||||||| |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 32418053 agggctccacacgttcagtaagtgtggatttgtaggagctttatgatttcaagcaattag 32417994 Query: 796 agagaactct-atgtcattgttgcttgcttctgtggagttgaacagatgtttcgctaaca 854 | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32417993 acagaactctgttgtcattgttgcttgcttctgtggagttgaacagatgtttcgctaaca 32417934 Query: 855 tatttcgacctgagtggtgaaa-cctcaagattgaatat 892 || |||||||||| |||||||| ||| |||||||||||| Sbjct: 32417933 taattcgacctgaatggtgaaagcctgaagattgaatat 32417895 >emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 684 bits (345), Expect = 0.0 Identities = 615/699 (87%), Gaps = 17/699 (2%) Strand = Plus / Minus Query: 204 agggtcctatctgtgatatgcctgacttcaagatgggcggaaagaagagtgatgaggctg 263 |||||||| | | |||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 35387 agggtcctgtatttgatatgcctgacttcaagatgggtgggaagaagagtgatgatgctg 35328 Query: 264 ctcctactgatgctggcgatgaagatggaggtgatgacgacggggatgaggatggtgacc 323 |||| |||||||| || ||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 35327 ctcccactgatgccggggatgaagatggtggtgatgatgacggggacgaggatggtgact 35268 Query: 324 ttggggagggcgaagaggacatctcggaaggtgaggggtatgacaatcccaagggcaatg 383 ||||||| |||||||||||| | || ||||||||||| ||||| ||||| || |||| | Sbjct: 35267 ttggggaaggcgaagaggacgtttcagaaggtgagggatatgataatccaaaaggcatcg 35208 Query: 384 aagacaagaagaaacaaagaggtgagggtgaggagaatggtgaggaggatgaggaagaac 443 | |||| |||| ||||||||||| |||||| ||||||||||||||||||||||| | Sbjct: 35207 ataacaacaaga---aaagaggtgagcctgaggaaaatggtgaggaggatgaggaagagc 35151 Query: 444 ctgatgaccaggagggtggtggaggtgacggtgacgacgacgacgatgacgacgacaatg 503 |||| | ||||||||||||||||||||| ||||||||| |||||||| || ||||||| Sbjct: 35150 ctgaaggccaggagggtggtggaggtga---tgacgacgatgacgatgatgatgacaatg 35094 Query: 504 aggatgacgacgac---gatgacggtgatgatgatgatgaggaagtagaagaggaagaag 560 |||||||||||||| ||||| |||| ||| |||||||| | |||||| |||||||| | Sbjct: 35093 aggatgacgacgacgatgatgatggtggtgaagatgatgatggagtagatgaggaagagg 35034 Query: 561 atgaccaggacaacgaggatgaggaggaagatgatgatgaagactcactccagcccccaa 620 | || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 35033 aagatcaggacaatgaggatgatgaggaagatgatgatgaagactcacttcagcccccaa 34974 Query: 621 agaagaggaagaagtgaagctcttcaatgcggctttagttaccaacttaccatgcgctga 680 |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 34973 agaagaggaagaagtgaatatcttc-atgcggctatagttaccaacttaccatgcgctga 34915 Query: 681 gctgtgcatggttttcgtcatgttctcggaatcgaacttgccttttagagtt-----aaa 735 ||||||| ||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 34914 gctgtgcttggttttcgtcatgttctcggaatcgaacttgcattagggagttaagaaaaa 34855 Query: 736 aaggctccacactatcagtacgtgtgggcttgtaggagctttatgatttgaagcaattag 795 | |||||||||| |||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 34854 agggctccacacgttcagtaagtgtggatttgtaggagctttatgatttcaagcaattag 34795 Query: 796 agagaactct-atgtcattgttgcttgcttctgtggagttgaacagatgtttcgctaaca 854 | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34794 acagaactctgttgtcattgttgcttgcttctgtggagttgaacagatgtttcgctaaca 34735 Query: 855 tatttcgacctgagtggtgaaa-cctcaagattgaatat 892 || |||||||||| |||||||| ||| |||||||||||| Sbjct: 34734 taattcgacctgaatggtgaaagcctgaagattgaatat 34696 >dbj|AK064789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C05, full insert sequence Length = 929 Score = 680 bits (343), Expect = 0.0 Identities = 612/697 (87%), Gaps = 16/697 (2%) Strand = Plus / Plus Query: 189 ccgccgtcgccgccgagggtcctatctgtgatatgcctgacttcaagatgggcggaaaga 248 ||||||| ||| ||||||||||| | | |||||||||||||||||||||||| || |||| Sbjct: 228 ccgccgtagccaccgagggtcctgtatttgatatgcctgacttcaagatgggtgggaaga 287 Query: 249 agagtgatgaggctgctcctactgatgctggcgatgaagatggaggtgatgacgacgggg 308 |||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||||| Sbjct: 288 agagtgatgatgctgctcccactgatgccggggatgaagatggtggtgatgatgacgggg 347 Query: 309 atgaggatggtgaccttggggagggcgaagaggacatctcggaaggtgaggggtatgaca 368 | |||||||||||| ||||||| |||||||||||| | || ||||||||||| ||||| | Sbjct: 348 acgaggatggtgactttggggaaggcgaagaggacgtttcagaaggtgagggatatgata 407 Query: 369 atcccaagggcaatgaagacaagaagaaacaaagaggtgagggtgaggagaatggtgagg 428 |||| || |||| || |||| |||| ||||||||||| |||||| |||||||||| Sbjct: 408 atccaaaaggcatcgataacaacaaga---aaagaggtgagcctgaggaaaatggtgagg 464 Query: 429 aggatgaggaagaacctgatgaccaggagggtggtggaggtgacggtgacgacgacgacg 488 ||||||||||||| ||||| | ||||||||||||||||||||| ||||||||| |||| Sbjct: 465 aggatgaggaagagcctgaaggccaggagggtggtggaggtga---tgacgacgatgacg 521 Query: 489 atgacgacgacaatgaggatgacgacgac---gatgacggtgatgatgatgatgaggaag 545 |||| || ||||||||||||||||||||| ||||| |||| ||| |||||||| | || Sbjct: 522 atgatgatgacaatgaggatgacgacgacgatgatgatggtggtgaagatgatgatggag 581 Query: 546 tagaagaggaagaagatgaccaggacaacgaggatgaggaggaagatgatgatgaagact 605 |||| |||||||| || || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 582 tagatgaggaagaggaagatcaggacaatgaggatgatgaggaagatgatgatgaagact 641 Query: 606 cactccagcccccaaagaagaggaagaagtgaagctcttcaatgcggctttagttaccaa 665 |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 642 cacttcagcccccaaagaagaggaagaagtgaatatcttc-atgcggctatagttaccaa 700 Query: 666 cttaccatgcgctgagctgtgcatggttttcgtcatgttctcggaatcgaacttgccttt 725 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 701 cttaccatgcgctgagctgtgcttggttttcgtcatgttctcggaatcgaacttgcatta 760 Query: 726 tagagtt-----aaaaaggctccacactatcagtacgtgtgggcttgtaggagctttatg 780 ||||| |||| |||||||||| |||||| |||||| |||||||||||||||| Sbjct: 761 gggagttaagaaaaaagggctccacacgttcagtaagtgtggatttgtaggagctttatg 820 Query: 781 atttgaagcaattagagagaactct-atgtcattgttgcttgcttctgtggagttgaaca 839 |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 821 atttcaagcaattagacagaactctgttgtcattgttgcttgcttctgtggagttgaaca 880 Query: 840 gatgtttcgctaacatatttcgacctgagtggtgaaa 876 |||||||||||| |||| |||||||||| |||||||| Sbjct: 881 gatgtttcgctagcataattcgacctgaatggtgaaa 917