BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf030p06 (861 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ... 672 0.0 emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:... 666 0.0 ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g... 666 0.0 gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein... 666 0.0 dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 666 0.0 >gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 672 bits (339), Expect = 0.0 Identities = 458/497 (92%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 63 ccagctgaggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgcc 122 |||| |||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 57 ccaggtgaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgcc 116 Query: 123 aagttggcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaag 182 |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117 aagttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaag 176 Query: 183 gccgggaaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggag 242 ||||| |||||||||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 177 gccggcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggag 236 Query: 243 gagttccgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtgggg 302 |||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || Sbjct: 237 gagttccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtagga 296 Query: 303 aaagcagccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagcc 362 ||||||||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||| Sbjct: 297 aaagcagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagcc 356 Query: 363 aaggccaataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgag 422 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 357 aaggccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgag 416 Query: 423 agcactgccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaggaatct 482 ||||||||||||||| || || |||||||||||||||||||| ||||| ||||||||| Sbjct: 417 agcactgccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatct 473 Query: 483 gacaagtccaagtccgaggtgaatgatgaggatgacgacgagggtagcgaagaggatgaa 542 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 gacaagtccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaa 533 Query: 543 gatgatgacgagtgagc 559 || |||||||||||||| Sbjct: 534 gacgatgacgagtgagc 550 Score = 246 bits (124), Expect = 1e-61 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Plus Query: 641 tctactagaattattcagtttcgtttcacatcgtcatgttttacgttt---ctcgtccta 697 |||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| Sbjct: 629 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 688 Query: 698 taacggacagcgctccttgttggcgccaccgctggctgttgcggtgcagc--atgtgttg 755 ||||||| ||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 689 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 748 Query: 756 tctccaccgtcaatgc-ccgcttgtacctagattactctttccatcgtcatgggctaaca 814 ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 749 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 808 Query: 815 ttgtgataatatcagtttgggtatgttagatcaaatt 851 ||||||||||||||||||| ||||||||||| ||||| Sbjct: 809 ttgtgataatatcagtttgcgtatgttagattaaatt 845 >emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 666 bits (336), Expect = 0.0 Identities = 452/490 (92%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 70 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 129 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 214 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 273 Query: 130 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 189 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 274 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 333 Query: 190 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 249 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 334 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 393 Query: 250 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 309 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 394 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 453 Query: 310 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 369 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 454 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 513 Query: 370 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 429 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 573 Query: 430 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaggaatctgacaagt 489 |||||||| || || |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 574 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 630 Query: 490 ccaagtccgaggtgaatgatgaggatgacgacgagggtagcgaagaggatgaagatgatg 549 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 631 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 690 Query: 550 acgagtgagc 559 |||||||||| Sbjct: 691 acgagtgagc 700 Score = 242 bits (122), Expect = 2e-60 Identities = 191/211 (90%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 641 tctactagaattattcagtttcgtttcacatcgtcatgttttacgttt---ctcgtccta 697 |||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| Sbjct: 782 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 841 Query: 698 taacggacagcgctccttgttggcgccaccgctggctgttgcggtgcagc--atgtgttg 755 ||||||| ||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 842 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 901 Query: 756 tctccaccgtcaatgc-ccgcttgtacctagattactctttccatcgtcatgggctaaca 814 ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 902 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 961 Query: 815 ttgtgataatatcagtttgggtatgttagat 845 ||||||||||||||||||| ||||||||||| Sbjct: 962 ttgtgataatatcagtttgcgtatgttagat 992 >ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 666 bits (336), Expect = 0.0 Identities = 452/490 (92%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 70 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 129 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 137 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 196 Query: 130 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 189 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 197 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 256 Query: 190 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 249 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 257 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 316 Query: 250 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 309 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 317 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 376 Query: 310 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 369 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 377 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 436 Query: 370 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 429 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 496 Query: 430 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaggaatctgacaagt 489 |||||||| || || |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 497 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 490 ccaagtccgaggtgaatgatgaggatgacgacgagggtagcgaagaggatgaagatgatg 549 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 554 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 613 Query: 550 acgagtgagc 559 |||||||||| Sbjct: 614 acgagtgagc 623 Score = 242 bits (122), Expect = 2e-60 Identities = 191/211 (90%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 641 tctactagaattattcagtttcgtttcacatcgtcatgttttacgttt---ctcgtccta 697 |||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 698 taacggacagcgctccttgttggcgccaccgctggctgttgcggtgcagc--atgtgttg 755 ||||||| ||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 756 tctccaccgtcaatgc-ccgcttgtacctagattactctttccatcgtcatgggctaaca 814 ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 815 ttgtgataatatcagtttgggtatgttagat 845 ||||||||||||||||||| ||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagat 912 >gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 666 bits (336), Expect = 0.0 Identities = 452/490 (92%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 70 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 129 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 113 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 172 Query: 130 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 189 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 173 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 232 Query: 190 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 249 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 233 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 292 Query: 250 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 309 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 293 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 352 Query: 310 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 369 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 353 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 412 Query: 370 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 429 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 472 Query: 430 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaggaatctgacaagt 489 |||||||| || || |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 473 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 529 Query: 490 ccaagtccgaggtgaatgatgaggatgacgacgagggtagcgaagaggatgaagatgatg 549 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 530 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 589 Query: 550 acgagtgagc 559 |||||||||| Sbjct: 590 acgagtgagc 599 Score = 246 bits (124), Expect = 1e-61 Identities = 196/217 (90%), Gaps = 6/217 (2%) Strand = Plus / Plus Query: 641 tctactagaattattcagtttcgtttcacatcgtcatgttttacgttt---ctcgtccta 697 |||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| Sbjct: 678 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 737 Query: 698 taacggacagcgctccttgttggcgccaccgctggctgttgcggtgcagc--atgtgttg 755 ||||||| ||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 738 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 797 Query: 756 tctccaccgtcaatgc-ccgcttgtacctagattactctttccatcgtcatgggctaaca 814 ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 798 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 857 Query: 815 ttgtgataatatcagtttgggtatgttagatcaaatt 851 ||||||||||||||||||| ||||||||||| ||||| Sbjct: 858 ttgtgataatatcagtttgcgtatgttagattaaatt 894 >dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 666 bits (336), Expect = 0.0 Identities = 452/490 (92%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 70 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 129 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 137 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 196 Query: 130 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 189 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 197 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 256 Query: 190 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 249 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 257 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 316 Query: 250 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 309 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 317 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 376 Query: 310 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 369 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 377 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 436 Query: 370 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 429 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 496 Query: 430 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaggaatctgacaagt 489 |||||||| || || |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 497 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 553 Query: 490 ccaagtccgaggtgaatgatgaggatgacgacgagggtagcgaagaggatgaagatgatg 549 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 554 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 613 Query: 550 acgagtgagc 559 |||||||||| Sbjct: 614 acgagtgagc 623 Score = 242 bits (122), Expect = 2e-60 Identities = 191/211 (90%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 641 tctactagaattattcagtttcgtttcacatcgtcatgttttacgttt---ctcgtccta 697 |||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 698 taacggacagcgctccttgttggcgccaccgctggctgttgcggtgcagc--atgtgttg 755 ||||||| ||||||||||||||||||||| | ||| ||||| |||||||| |||| ||| Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 756 tctccaccgtcaatgc-ccgcttgtacctagattactctttccatcgtcatgggctaaca 814 ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 815 ttgtgataatatcagtttgggtatgttagat 845 ||||||||||||||||||| ||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagat 912