BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf030i15 (1047 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT831877.1| Oryza sativa (indica cultivar-group) cDNA clone:... 216 1e-52 dbj|AK099407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 1e-52 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16 dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16 dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 96 3e-16 >emb|CT831877.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102M02, full insert sequence Length = 1087 Score = 216 bits (109), Expect = 1e-52 Identities = 157/173 (90%) Strand = Plus / Plus Query: 473 ggcgttccgggtggcggagttcttggcgtgctgcgacctgtgccggcggccgctggacgg 532 |||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| Sbjct: 488 ggcgttccgggtggcggagttcctggcgtgctgcgacctctgccggcggccgctcgacgg 547 Query: 533 caaggacatctacatgtaccgaggggagagggcgttctgcagcatggagtgcaggtacca 592 ||||||||||| ||||||| |||||||| | || |||||||||||||||||| | ||||| Sbjct: 548 caaggacatcttcatgtacagaggggagcgcgccttctgcagcatggagtgccgctacca 607 Query: 593 cgccatggtgagcgacgagttccaagaagagaaggagcgcaagcgccgcgccg 645 |||||| || ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 608 cgccatcgtcagcgacgagttccaacaggagaaggaccggaagcgccgcgccg 660 Score = 101 bits (51), Expect = 6e-18 Identities = 103/119 (86%), Gaps = 6/119 (5%) Strand = Plus / Plus Query: 208 cgtcgccgacgagcccgctggaccgcgtggc---tgccgcgccgtcgccacgag---tgt 261 ||||||||||||||||||| ||||||| ||| | |||||||||||| || | ||| Sbjct: 190 cgtcgccgacgagcccgctcgaccgcgcggcgcttcacgcgccgtcgccgcgcggcgtgt 249 Query: 262 ggcgccaccgcgaggccggcggggtcgggctcggcatcctggccgcgctcgaggcgcag 320 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 250 ggcggcaccgcgacgcgggcggggtcgggctcggcatcctggcggcgctcgaggcgcag 308 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 378 cgcgctgcgcggctggaggtctccgagctcggctgcagcggccggtgcgccaccagcgtg 437 ||||| ||| ||||||||||||| |||||||| |||||||| ||||||||||||||| || Sbjct: 405 cgcgccgcgaggctggaggtctcggagctcgggtgcagcgggcggtgcgccaccagcctg 464 Query: 438 tgcgg 442 ||||| Sbjct: 465 tgcgg 469 >dbj|AK099407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C06, full insert sequence Length = 1050 Score = 216 bits (109), Expect = 1e-52 Identities = 157/173 (90%) Strand = Plus / Plus Query: 473 ggcgttccgggtggcggagttcttggcgtgctgcgacctgtgccggcggccgctggacgg 532 |||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| Sbjct: 448 ggcgttccgggtggcggagttcctggcgtgctgcgacctctgccggcggccgctcgacgg 507 Query: 533 caaggacatctacatgtaccgaggggagagggcgttctgcagcatggagtgcaggtacca 592 ||||||||||| ||||||| |||||||| | || |||||||||||||||||| | ||||| Sbjct: 508 caaggacatcttcatgtacagaggggagcgcgccttctgcagcatggagtgccgctacca 567 Query: 593 cgccatggtgagcgacgagttccaagaagagaaggagcgcaagcgccgcgccg 645 |||||| || ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 568 cgccatcgtcagcgacgagttccaacaggagaaggaccggaagcgccgcgccg 620 Score = 93.7 bits (47), Expect = 1e-15 Identities = 102/119 (85%), Gaps = 6/119 (5%) Strand = Plus / Plus Query: 208 cgtcgccgacgagcccgctggaccgcgtggc---tgccgcgccgtcgccacgagt---gt 261 ||||||||||||||||||| ||||||| ||| | |||||||||||| || | || Sbjct: 150 cgtcgccgacgagcccgctcgaccgcgcggcgcttcacgcgccgtcgccgcgcggcgagt 209 Query: 262 ggcgccaccgcgaggccggcggggtcgggctcggcatcctggccgcgctcgaggcgcag 320 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 210 ggcggcaccgcgacgcgggcggggtcgggctcggcatcctggcggcgctcgaggcgcag 268 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 378 cgcgctgcgcggctggaggtctccgagctcggctgcagcggccggtgcgccaccagcgtg 437 ||||| ||| ||||||||||||| |||||||| |||||||| ||||||||||||||| || Sbjct: 365 cgcgccgcgaggctggaggtctcggagctcgggtgcagcgggcggtgcgccaccagcctg 424 Query: 438 tgcgg 442 ||||| Sbjct: 425 tgcgg 429 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 559 agagggcgttctgcagcatggagtgcaggtaccacgccatggtgagcgacgagttccaag 618 ||||||| |||| |||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 25570345 agagggccttctatagcatggagtgccggtaccacgccatcgtcagcgacgagttccaag 25570286 Query: 619 aagagaaggagc 630 |||||||||||| Sbjct: 25570285 aagagaaggagc 25570274 >dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 559 agagggcgttctgcagcatggagtgcaggtaccacgccatggtgagcgacgagttccaag 618 ||||||| |||| |||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 97948 agagggccttctatagcatggagtgccggtaccacgccatcgtcagcgacgagttccaag 97889 Query: 619 aagagaaggagc 630 |||||||||||| Sbjct: 97888 aagagaaggagc 97877 >dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 559 agagggcgttctgcagcatggagtgcaggtaccacgccatggtgagcgacgagttccaag 618 ||||||| |||| |||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 17151 agagggccttctatagcatggagtgccggtaccacgccatcgtcagcgacgagttccaag 17092 Query: 619 aagagaaggagc 630 |||||||||||| Sbjct: 17091 aagagaaggagc 17080