BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf030a11 (1284 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058023.1| Oryza sativa (japonica cultivar-group) Os03g... 238 5e-59 gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 238 5e-59 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 238 5e-59 dbj|AK067369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 5e-59 gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 105 4e-19 >ref|NM_001058023.1| Oryza sativa (japonica cultivar-group) Os03g0786400 (Os03g0786400) mRNA, complete cds Length = 1205 Score = 238 bits (120), Expect = 5e-59 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 678 ctcctggcggccgtgagcagcgggcgagcgatgctgggcgcggcagaccagcccggcgcc 737 |||||||||| |||||||||||||| |||||||||| ||| | |||||||| |||||| Sbjct: 655 ctcctggcggtggtgagcagcgggcgcgcgatgctggcggcgcccgaccagccgggcgcc 714 Query: 738 ggccgcaacgacctgatcgacatgctcaactggaggcggggctcccacagccccacggcc 797 || ||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 715 gggcgcgacgacatgatcgacatgctcaactggaggcgaggctcccacggccccaccgcc 774 Query: 798 tccgcggccgccaccaccgcctccccggccagcaccaccaccgacctcaccacttccacc 857 ||||| ||||||||||| |||||||||| |||||||||||| |||||||| | | || Sbjct: 775 tccgccgccgccaccacgccctccccggcaagcaccaccaccacgctcaccaccttcgcc 834 Query: 858 ggcgccgacggcagcaacaacggcgag------gaggagctcgacctcaacttgagcctc 911 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 835 agcgccgacggcagcaacaacggcgaggagaacgaggagctcgacctcaacttgagcctc 894 Query: 912 tag 914 ||| Sbjct: 895 tag 897 Score = 228 bits (115), Expect = 4e-56 Identities = 139/147 (94%) Strand = Plus / Plus Query: 224 gtcggcgtgcatcgacggcaaggacgtgcggctgttcgcgtgcctcttctgcaacaagaa 283 ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| Sbjct: 102 gtcggcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaa 161 Query: 284 gttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagaggagcat 343 ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 162 gttcttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcat 221 Query: 344 cggctggaacccctacttctacatgcc 370 ||| ||||| ||||||||||||||||| Sbjct: 222 cgggtggaatccctacttctacatgcc 248 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 492 ctcccagcgcacgcgtacgcgggccatggctacgccgccgtgccggcgtcgttccccatc 551 ||||| |||||||||||||| || || || |||||||| |||||| |||||||||||||| Sbjct: 415 ctcccggcgcacgcgtacgccgggcacgggtacgccgcggtgccgacgtcgttccccatc 474 Query: 552 gcctcccacagctcgagcgtggtgggctccggcgggctcctgtactacgc 601 || || ||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 475 gcgtcgcacagctcgagcgtggttggctccggtgggctgcagtactacgc 524 >gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 238 bits (120), Expect = 5e-59 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 678 ctcctggcggccgtgagcagcgggcgagcgatgctgggcgcggcagaccagcccggcgcc 737 |||||||||| |||||||||||||| |||||||||| ||| | |||||||| |||||| Sbjct: 76089 ctcctggcggtggtgagcagcgggcgcgcgatgctggcggcgcccgaccagccgggcgcc 76030 Query: 738 ggccgcaacgacctgatcgacatgctcaactggaggcggggctcccacagccccacggcc 797 || ||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 76029 gggcgcgacgacatgatcgacatgctcaactggaggcgaggctcccacggccccaccgcc 75970 Query: 798 tccgcggccgccaccaccgcctccccggccagcaccaccaccgacctcaccacttccacc 857 ||||| ||||||||||| |||||||||| |||||||||||| |||||||| | | || Sbjct: 75969 tccgccgccgccaccacgccctccccggcaagcaccaccaccacgctcaccaccttcgcc 75910 Query: 858 ggcgccgacggcagcaacaacggcgag------gaggagctcgacctcaacttgagcctc 911 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75909 agcgccgacggcagcaacaacggcgaggagaacgaggagctcgacctcaacttgagcctc 75850 Query: 912 tag 914 ||| Sbjct: 75849 tag 75847 Score = 228 bits (115), Expect = 4e-56 Identities = 139/147 (94%) Strand = Plus / Minus Query: 224 gtcggcgtgcatcgacggcaaggacgtgcggctgttcgcgtgcctcttctgcaacaagaa 283 ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| Sbjct: 76642 gtcggcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaa 76583 Query: 284 gttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagaggagcat 343 ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 76582 gttcttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcat 76523 Query: 344 cggctggaacccctacttctacatgcc 370 ||| ||||| ||||||||||||||||| Sbjct: 76522 cgggtggaatccctacttctacatgcc 76496 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 492 ctcccagcgcacgcgtacgcgggccatggctacgccgccgtgccggcgtcgttccccatc 551 ||||| |||||||||||||| || || || |||||||| |||||| |||||||||||||| Sbjct: 76329 ctcccggcgcacgcgtacgccgggcacgggtacgccgcggtgccgacgtcgttccccatc 76270 Query: 552 gcctcccacagctcgagcgtggtgggctccggcgggctcctgtactacgc 601 || || ||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 76269 gcgtcgcacagctcgagcgtggttggctccggtgggctgcagtactacgc 76220 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 238 bits (120), Expect = 5e-59 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Minus Query: 678 ctcctggcggccgtgagcagcgggcgagcgatgctgggcgcggcagaccagcccggcgcc 737 |||||||||| |||||||||||||| |||||||||| ||| | |||||||| |||||| Sbjct: 32432832 ctcctggcggtggtgagcagcgggcgcgcgatgctggcggcgcccgaccagccgggcgcc 32432773 Query: 738 ggccgcaacgacctgatcgacatgctcaactggaggcggggctcccacagccccacggcc 797 || ||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 32432772 gggcgcgacgacatgatcgacatgctcaactggaggcgaggctcccacggccccaccgcc 32432713 Query: 798 tccgcggccgccaccaccgcctccccggccagcaccaccaccgacctcaccacttccacc 857 ||||| ||||||||||| |||||||||| |||||||||||| |||||||| | | || Sbjct: 32432712 tccgccgccgccaccacgccctccccggcaagcaccaccaccacgctcaccaccttcgcc 32432653 Query: 858 ggcgccgacggcagcaacaacggcgag------gaggagctcgacctcaacttgagcctc 911 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 32432652 agcgccgacggcagcaacaacggcgaggagaacgaggagctcgacctcaacttgagcctc 32432593 Query: 912 tag 914 ||| Sbjct: 32432592 tag 32432590 Score = 228 bits (115), Expect = 4e-56 Identities = 139/147 (94%) Strand = Plus / Minus Query: 224 gtcggcgtgcatcgacggcaaggacgtgcggctgttcgcgtgcctcttctgcaacaagaa 283 ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| Sbjct: 32433385 gtcggcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaa 32433326 Query: 284 gttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagaggagcat 343 ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 32433325 gttcttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcat 32433266 Query: 344 cggctggaacccctacttctacatgcc 370 ||| ||||| ||||||||||||||||| Sbjct: 32433265 cgggtggaatccctacttctacatgcc 32433239 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 492 ctcccagcgcacgcgtacgcgggccatggctacgccgccgtgccggcgtcgttccccatc 551 ||||| |||||||||||||| || || || |||||||| |||||| |||||||||||||| Sbjct: 32433072 ctcccggcgcacgcgtacgccgggcacgggtacgccgcggtgccgacgtcgttccccatc 32433013 Query: 552 gcctcccacagctcgagcgtggtgggctccggcgggctcctgtactacgc 601 || || ||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 32433012 gcgtcgcacagctcgagcgtggttggctccggtgggctgcagtactacgc 32432963 >dbj|AK067369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D22, full insert sequence Length = 1208 Score = 238 bits (120), Expect = 5e-59 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 678 ctcctggcggccgtgagcagcgggcgagcgatgctgggcgcggcagaccagcccggcgcc 737 |||||||||| |||||||||||||| |||||||||| ||| | |||||||| |||||| Sbjct: 658 ctcctggcggtggtgagcagcgggcgcgcgatgctggcggcgcccgaccagccgggcgcc 717 Query: 738 ggccgcaacgacctgatcgacatgctcaactggaggcggggctcccacagccccacggcc 797 || ||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 718 gggcgcgacgacatgatcgacatgctcaactggaggcgaggctcccacggccccaccgcc 777 Query: 798 tccgcggccgccaccaccgcctccccggccagcaccaccaccgacctcaccacttccacc 857 ||||| ||||||||||| |||||||||| |||||||||||| |||||||| | | || Sbjct: 778 tccgccgccgccaccacgccctccccggcaagcaccaccaccacgctcaccaccttcgcc 837 Query: 858 ggcgccgacggcagcaacaacggcgag------gaggagctcgacctcaacttgagcctc 911 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 838 agcgccgacggcagcaacaacggcgaggagaacgaggagctcgacctcaacttgagcctc 897 Query: 912 tag 914 ||| Sbjct: 898 tag 900 Score = 228 bits (115), Expect = 4e-56 Identities = 139/147 (94%) Strand = Plus / Plus Query: 224 gtcggcgtgcatcgacggcaaggacgtgcggctgttcgcgtgcctcttctgcaacaagaa 283 ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| Sbjct: 105 gtcggcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaa 164 Query: 284 gttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagaggagcat 343 ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 165 gttcttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcat 224 Query: 344 cggctggaacccctacttctacatgcc 370 ||| ||||| ||||||||||||||||| Sbjct: 225 cgggtggaatccctacttctacatgcc 251 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 492 ctcccagcgcacgcgtacgcgggccatggctacgccgccgtgccggcgtcgttccccatc 551 ||||| |||||||||||||| || || || |||||||| |||||| |||||||||||||| Sbjct: 418 ctcccggcgcacgcgtacgccgggcacgggtacgccgcggtgccgacgtcgttccccatc 477 Query: 552 gcctcccacagctcgagcgtggtgggctccggcgggctcctgtactacgc 601 || || ||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 478 gcgtcgcacagctcgagcgtggttggctccggtgggctgcagtactacgc 527 >gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 105 bits (53), Expect = 4e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 251 gcggctgttcgcgtgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcgg 310 |||||||||| |||||||||||||| | ||||||||| | ||||||||||||||||| || Sbjct: 119254 gcggctgttcccgtgcctcttctgcgagaagaagttcgtcaagtcgcaggcgctcggtgg 119313 Query: 311 ccaccagaacgcgcacaagaaggag 335 |||||||||||||||| ||||||| Sbjct: 119314 gcaccagaacgcgcacaggaaggag 119338