BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf029p14 (1177 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059364.1| Oryza sativa (japonica cultivar-group) Os04g... 355 3e-94 emb|CR855101.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 210 9e-51 emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 210 9e-51 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 210 9e-51 >ref|NM_001059364.1| Oryza sativa (japonica cultivar-group) Os04g0432200 (Os04g0432200) mRNA, complete cds Length = 4320 Score = 355 bits (179), Expect = 3e-94 Identities = 290/327 (88%) Strand = Plus / Plus Query: 586 tcagttaaggtagtatcagcagcgaaggacaattgggtgccacagattcgtgggcctgag 645 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | | ||| Sbjct: 460 tcagttaaggtagtatcaacagcgaaagacaattgggtgccacagagtcgtgagtcagag 519 Query: 646 gaggcaaaggggagcactgaggggttggaaattagaattggcaggcgtcgagaagaggat 705 |||| ||||||||| |||| |||||||||||| |||| ||||||| |||||||| ||| Sbjct: 520 gaggtgcaggggagcaatgagaggttggaaattataattagcaggcggcgagaagaagat 579 Query: 706 gtgacattggatgatgggcggtcatcgcaagctgcatggattcggcaatacatggaacag 765 |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 580 gtgacattggatgacgggcaatcatcacaagctgcatggattcggcagtacatggaacaa 639 Query: 766 caagaggaggaggatgatgcaaattctaatgattcctccacatgggaagatcacttctca 825 ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | || Sbjct: 640 caagaggaggaagatgatgtgaattctaatgattcctacacatgggaagatcactgccca 699 Query: 826 ccaagttttgaagctgttgaagcaaagccaagtaggcgaaagaagaagggtaaacaagag 885 |||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 700 ccaagtttggaaactgctgaggcaaagccaagtaggcgaaagaagaagggtaaacaagcg 759 Query: 886 aactccacatatggaaacccgaaggaa 912 || ||| ||| ||||||| | |||||| Sbjct: 760 aaatcctcatctggaaactcaaaggaa 786 Score = 190 bits (96), Expect = 9e-45 Identities = 117/124 (94%) Strand = Plus / Plus Query: 257 gatgctcccgcggcgcgtaccgagttgagggagcagaaggcgcggcggctgcgcggcgtc 316 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || Sbjct: 208 gatgctcccgcggcgcgtgccgagtcgagggagcagaaggcgcggcggctgcgcggggtg 267 Query: 317 tacgacaagctcgccctcgagggcttctcctccgcgcaaatcgagcaggccctctccgct 376 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 268 tacgacaagctctccctcgagggcttctcctccgcgcaaatcgagcaggcgctctccgcg 327 Query: 377 ctat 380 |||| Sbjct: 328 ctat 331 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Plus Query: 944 caaattcagaaattgcaaatgttaagggtgatcagattgactttggtgcaactgggaaca 1003 ||||||| || |||||||||| | ||||||||| |||||| |||||||||||| || | Sbjct: 815 caaattctgatattgcaaatgctgagggtgatctagttgactctggtgcaactggaaaga 874 Query: 1004 aatctgacagtcttgtccatattgatcaaggatccaatttacaaaaagcaattcctaagg 1063 ||| ||| |||| ||||||||| ||| |||||||| ||| | ||| ||| | |||| Sbjct: 875 aatgtgagagtcctgtccatatggatggaggatccagtttggagaaaaaaatgtccaagg 934 Query: 1064 atgttggtgaaacttgcacgaaggaggtagaggaagaggaagtagagcttgataacttgt 1123 |||||| |||||| |||| ||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 935 atgttgatgaaaccagcacaaaggaggtagaagaagaggaagtagaacttgataacctgt 994 Query: 1124 tttttgaagactcatctgcttgggaggcagtggctccagaaat 1166 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 995 tttttgaagactcttctgcttgggaggcagtggctccagaaat 1037 Score = 129 bits (65), Expect = 3e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 468 ggattcggcgacgtttgagtcggcgttggattggctatgctttaatctgcccggcgacga 527 ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 333 ggattcggctacgttcgagtcggcgttggattggctgtgctttaatctgcccggcgatga 392 Query: 528 gctccccctcaagttctccag 548 ||||||||||||||||||||| Sbjct: 393 gctccccctcaagttctccag 413 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 153 ccgcggcgccgcgcctccagatctcgtcggagaacgagcgccgcctccgccgcctcctcc 212 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 107 ccgccgcgccgcggctccagatctcgtcggagaacgagcgccgcctccgccgcctgctcc 166 Query: 213 tcaactcc 220 |||||||| Sbjct: 167 tcaactcc 174 >emb|CR855101.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0308C03, complete sequence Length = 45123 Score = 210 bits (106), Expect = 9e-51 Identities = 169/190 (88%) Strand = Plus / Minus Query: 586 tcagttaaggtagtatcagcagcgaaggacaattgggtgccacagattcgtgggcctgag 645 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | | ||| Sbjct: 35004 tcagttaaggtagtatcaacagcgaaagacaattgggtgccacagagtcgtgagtcagag 34945 Query: 646 gaggcaaaggggagcactgaggggttggaaattagaattggcaggcgtcgagaagaggat 705 |||| ||||||||| |||| |||||||||||| |||| ||||||| |||||||| ||| Sbjct: 34944 gaggtgcaggggagcaatgagaggttggaaattataattagcaggcggcgagaagaagat 34885 Query: 706 gtgacattggatgatgggcggtcatcgcaagctgcatggattcggcaatacatggaacag 765 |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 34884 gtgacattggatgacgggcaatcatcacaagctgcatggattcggcagtacatggaacaa 34825 Query: 766 caagaggagg 775 |||||||||| Sbjct: 34824 caagaggagg 34815 Score = 190 bits (96), Expect = 9e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 257 gatgctcccgcggcgcgtaccgagttgagggagcagaaggcgcggcggctgcgcggcgtc 316 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || Sbjct: 35832 gatgctcccgcggcgcgtgccgagtcgagggagcagaaggcgcggcggctgcgcggggtg 35773 Query: 317 tacgacaagctcgccctcgagggcttctcctccgcgcaaatcgagcaggccctctccgct 376 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 35772 tacgacaagctctccctcgagggcttctcctccgcgcaaatcgagcaggcgctctccgcg 35713 Query: 377 ctat 380 |||| Sbjct: 35712 ctat 35709 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Minus Query: 944 caaattcagaaattgcaaatgttaagggtgatcagattgactttggtgcaactgggaaca 1003 ||||||| || |||||||||| | ||||||||| |||||| |||||||||||| || | Sbjct: 33932 caaattctgatattgcaaatgctgagggtgatctagttgactctggtgcaactggaaaga 33873 Query: 1004 aatctgacagtcttgtccatattgatcaaggatccaatttacaaaaagcaattcctaagg 1063 ||| ||| |||| ||||||||| ||| |||||||| ||| | ||| ||| | |||| Sbjct: 33872 aatgtgagagtcctgtccatatggatggaggatccagtttggagaaaaaaatgtccaagg 33813 Query: 1064 atgttggtgaaacttgcacgaaggaggtagaggaagaggaagtagagcttgataacttgt 1123 |||||| |||||| |||| ||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 33812 atgttgatgaaaccagcacaaaggaggtagaagaagaggaagtagaacttgataacctgt 33753 Query: 1124 tttttgaagactcatctgcttgggaggcagtggctccagaaat 1166 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33752 tttttgaagactcttctgcttgggaggcagtggctccagaaat 33710 Score = 131 bits (66), Expect = 7e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 467 aggattcggcgacgtttgagtcggcgttggattggctatgctttaatctgcccggcgacg 526 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 35611 aggattcggctacgttcgagtcggcgttggattggctgtgctttaatctgcccggcgatg 35552 Query: 527 agctccccctcaagttctccag 548 |||||||||||||||||||||| Sbjct: 35551 agctccccctcaagttctccag 35530 Score = 129 bits (65), Expect = 3e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 773 aggaggatgatgcaaattctaatgattcctccacatgggaagatcacttctcaccaagtt 832 |||| ||||||| |||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 34239 aggaagatgatgtgaattctaatgattcctacacatgggaagatcactgcccaccaagtt 34180 Query: 833 ttgaagctgttgaagcaaagccaagtaggcgaaagaagaagggta 877 | ||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct: 34179 tggaaactgctgaggcaaagccaagtaggcgaaagaagaagggta 34135 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 153 ccgcggcgccgcgcctccagatctcgtcggagaacgagcgccgcctccgccgcctcctcc 212 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 35933 ccgccgcgccgcggctccagatctcgtcggagaacgagcgccgcctccgccgcctgctcc 35874 Query: 213 tcaactcc 220 |||||||| Sbjct: 35873 tcaactcc 35866 >emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 210 bits (106), Expect = 9e-51 Identities = 169/190 (88%) Strand = Plus / Minus Query: 586 tcagttaaggtagtatcagcagcgaaggacaattgggtgccacagattcgtgggcctgag 645 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | | ||| Sbjct: 102482 tcagttaaggtagtatcaacagcgaaagacaattgggtgccacagagtcgtgagtcagag 102423 Query: 646 gaggcaaaggggagcactgaggggttggaaattagaattggcaggcgtcgagaagaggat 705 |||| ||||||||| |||| |||||||||||| |||| ||||||| |||||||| ||| Sbjct: 102422 gaggtgcaggggagcaatgagaggttggaaattataattagcaggcggcgagaagaagat 102363 Query: 706 gtgacattggatgatgggcggtcatcgcaagctgcatggattcggcaatacatggaacag 765 |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 102362 gtgacattggatgacgggcaatcatcacaagctgcatggattcggcagtacatggaacaa 102303 Query: 766 caagaggagg 775 |||||||||| Sbjct: 102302 caagaggagg 102293 Score = 190 bits (96), Expect = 9e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 257 gatgctcccgcggcgcgtaccgagttgagggagcagaaggcgcggcggctgcgcggcgtc 316 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || Sbjct: 103310 gatgctcccgcggcgcgtgccgagtcgagggagcagaaggcgcggcggctgcgcggggtg 103251 Query: 317 tacgacaagctcgccctcgagggcttctcctccgcgcaaatcgagcaggccctctccgct 376 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103250 tacgacaagctctccctcgagggcttctcctccgcgcaaatcgagcaggcgctctccgcg 103191 Query: 377 ctat 380 |||| Sbjct: 103190 ctat 103187 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Minus Query: 944 caaattcagaaattgcaaatgttaagggtgatcagattgactttggtgcaactgggaaca 1003 ||||||| || |||||||||| | ||||||||| |||||| |||||||||||| || | Sbjct: 101410 caaattctgatattgcaaatgctgagggtgatctagttgactctggtgcaactggaaaga 101351 Query: 1004 aatctgacagtcttgtccatattgatcaaggatccaatttacaaaaagcaattcctaagg 1063 ||| ||| |||| ||||||||| ||| |||||||| ||| | ||| ||| | |||| Sbjct: 101350 aatgtgagagtcctgtccatatggatggaggatccagtttggagaaaaaaatgtccaagg 101291 Query: 1064 atgttggtgaaacttgcacgaaggaggtagaggaagaggaagtagagcttgataacttgt 1123 |||||| |||||| |||| ||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 101290 atgttgatgaaaccagcacaaaggaggtagaagaagaggaagtagaacttgataacctgt 101231 Query: 1124 tttttgaagactcatctgcttgggaggcagtggctccagaaat 1166 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 101230 tttttgaagactcttctgcttgggaggcagtggctccagaaat 101188 Score = 131 bits (66), Expect = 7e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 467 aggattcggcgacgtttgagtcggcgttggattggctatgctttaatctgcccggcgacg 526 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 103089 aggattcggctacgttcgagtcggcgttggattggctgtgctttaatctgcccggcgatg 103030 Query: 527 agctccccctcaagttctccag 548 |||||||||||||||||||||| Sbjct: 103029 agctccccctcaagttctccag 103008 Score = 129 bits (65), Expect = 3e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 773 aggaggatgatgcaaattctaatgattcctccacatgggaagatcacttctcaccaagtt 832 |||| ||||||| |||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 101717 aggaagatgatgtgaattctaatgattcctacacatgggaagatcactgcccaccaagtt 101658 Query: 833 ttgaagctgttgaagcaaagccaagtaggcgaaagaagaagggta 877 | ||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct: 101657 tggaaactgctgaggcaaagccaagtaggcgaaagaagaagggta 101613 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 153 ccgcggcgccgcgcctccagatctcgtcggagaacgagcgccgcctccgccgcctcctcc 212 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103411 ccgccgcgccgcggctccagatctcgtcggagaacgagcgccgcctccgccgcctgctcc 103352 Query: 213 tcaactcc 220 |||||||| Sbjct: 103351 tcaactcc 103344 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 210 bits (106), Expect = 9e-51 Identities = 169/190 (88%) Strand = Plus / Minus Query: 586 tcagttaaggtagtatcagcagcgaaggacaattgggtgccacagattcgtgggcctgag 645 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| | | ||| Sbjct: 21452732 tcagttaaggtagtatcaacagcgaaagacaattgggtgccacagagtcgtgagtcagag 21452673 Query: 646 gaggcaaaggggagcactgaggggttggaaattagaattggcaggcgtcgagaagaggat 705 |||| ||||||||| |||| |||||||||||| |||| ||||||| |||||||| ||| Sbjct: 21452672 gaggtgcaggggagcaatgagaggttggaaattataattagcaggcggcgagaagaagat 21452613 Query: 706 gtgacattggatgatgggcggtcatcgcaagctgcatggattcggcaatacatggaacag 765 |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 21452612 gtgacattggatgacgggcaatcatcacaagctgcatggattcggcagtacatggaacaa 21452553 Query: 766 caagaggagg 775 |||||||||| Sbjct: 21452552 caagaggagg 21452543 Score = 190 bits (96), Expect = 9e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 257 gatgctcccgcggcgcgtaccgagttgagggagcagaaggcgcggcggctgcgcggcgtc 316 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || Sbjct: 21453560 gatgctcccgcggcgcgtgccgagtcgagggagcagaaggcgcggcggctgcgcggggtg 21453501 Query: 317 tacgacaagctcgccctcgagggcttctcctccgcgcaaatcgagcaggccctctccgct 376 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 21453500 tacgacaagctctccctcgagggcttctcctccgcgcaaatcgagcaggcgctctccgcg 21453441 Query: 377 ctat 380 |||| Sbjct: 21453440 ctat 21453437 Score = 180 bits (91), Expect = 8e-42 Identities = 190/223 (85%) Strand = Plus / Minus Query: 944 caaattcagaaattgcaaatgttaagggtgatcagattgactttggtgcaactgggaaca 1003 ||||||| || |||||||||| | ||||||||| |||||| |||||||||||| || | Sbjct: 21451660 caaattctgatattgcaaatgctgagggtgatctagttgactctggtgcaactggaaaga 21451601 Query: 1004 aatctgacagtcttgtccatattgatcaaggatccaatttacaaaaagcaattcctaagg 1063 ||| ||| |||| ||||||||| ||| |||||||| ||| | ||| ||| | |||| Sbjct: 21451600 aatgtgagagtcctgtccatatggatggaggatccagtttggagaaaaaaatgtccaagg 21451541 Query: 1064 atgttggtgaaacttgcacgaaggaggtagaggaagaggaagtagagcttgataacttgt 1123 |||||| |||||| |||| ||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 21451540 atgttgatgaaaccagcacaaaggaggtagaagaagaggaagtagaacttgataacctgt 21451481 Query: 1124 tttttgaagactcatctgcttgggaggcagtggctccagaaat 1166 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 21451480 tttttgaagactcttctgcttgggaggcagtggctccagaaat 21451438 Score = 131 bits (66), Expect = 7e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 467 aggattcggcgacgtttgagtcggcgttggattggctatgctttaatctgcccggcgacg 526 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct: 21453339 aggattcggctacgttcgagtcggcgttggattggctgtgctttaatctgcccggcgatg 21453280 Query: 527 agctccccctcaagttctccag 548 |||||||||||||||||||||| Sbjct: 21453279 agctccccctcaagttctccag 21453258 Score = 129 bits (65), Expect = 3e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 773 aggaggatgatgcaaattctaatgattcctccacatgggaagatcacttctcaccaagtt 832 |||| ||||||| |||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 21451967 aggaagatgatgtgaattctaatgattcctacacatgggaagatcactgcccaccaagtt 21451908 Query: 833 ttgaagctgttgaagcaaagccaagtaggcgaaagaagaagggta 877 | ||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct: 21451907 tggaaactgctgaggcaaagccaagtaggcgaaagaagaagggta 21451863 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 153 ccgcggcgccgcgcctccagatctcgtcggagaacgagcgccgcctccgccgcctcctcc 212 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 21453661 ccgccgcgccgcggctccagatctcgtcggagaacgagcgccgcctccgccgcctgctcc 21453602 Query: 213 tcaactcc 220 |||||||| Sbjct: 21453601 tcaactcc 21453594