BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf029m06 (982 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055579.1| Oryza sativa (japonica cultivar-group) Os03g... 311 3e-81 dbj|AK059911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 3e-81 emb|CT830405.1| Oryza sativa (indica cultivar-group) cDNA clone:... 303 7e-79 gb|DQ244550.1| Zea mays clone 9078 mRNA sequence 244 6e-61 gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 196 1e-46 >ref|NM_001055579.1| Oryza sativa (japonica cultivar-group) Os03g0161500 (Os03g0161500) mRNA, complete cds Length = 1172 Score = 311 bits (157), Expect = 3e-81 Identities = 267/303 (88%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 152 ccaccagagtggccgtcgccgatgatttcttctcccccctcagccctctcctctcccctg 211 ||||||| | |||||||||||| |||||||||||||| |||||||| |||||| |||||| Sbjct: 228 ccaccagggcggccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctg 287 Query: 212 taatcaactcgatgtgcaacacggtggcgtgcgggaaggggaactgcacggtgacgtcgg 271 ||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 288 taatcgggtcgatgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcgg 347 Query: 272 ggttgccggggtacaggtgcgagtgcgagccggggtggacgcagatgcacgtcagcgacg 331 |||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| Sbjct: 348 ggttcccggggtacaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgacc 407 Query: 332 agttcaggttcctgccgtgcgtcatccccaactgttcccttgatcgcacatgttctaaca 391 || ||| |||||||| ||||||||||||||||||||| |||| || ||||||||||| Sbjct: 408 aggccagcttcctgccctgcgtcatccccaactgttccattgaccgtgcatgttctaac- 466 Query: 392 atacttcagcacctgcaccggcgcttttaccaccacccaaaaatttctccctctcaccag 451 ||| |||||| ||||| |||| ||||||| |||||||||||||||||||| || ||| Sbjct: 467 --actatagcaccagcacctgcgcctttaccatcacccaaaaatttctccctcccaacag 524 Query: 452 acc 454 ||| Sbjct: 525 acc 527 Score = 202 bits (102), Expect = 2e-48 Identities = 153/170 (90%) Strand = Plus / Plus Query: 481 ggaggcacatacaagaatggcacaggtctcagttaccactgcgagtgcaaggagggtttc 540 |||||||||| ||||||||| ||||| ||||| |||||||||||||||| ||||||||| Sbjct: 693 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 752 Query: 541 agcaacctcctgaacatcacaacaatgccttgttttcagagctgttcaatcggtgcggat 600 || ||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| Sbjct: 753 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 812 Query: 601 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgc 650 ||||||||||||||| || ||||| ||||||||||||||| |||||||| Sbjct: 813 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgc 862 >dbj|AK059911.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C11, full insert sequence Length = 1172 Score = 311 bits (157), Expect = 3e-81 Identities = 267/303 (88%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 152 ccaccagagtggccgtcgccgatgatttcttctcccccctcagccctctcctctcccctg 211 ||||||| | |||||||||||| |||||||||||||| |||||||| |||||| |||||| Sbjct: 228 ccaccagggcggccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctg 287 Query: 212 taatcaactcgatgtgcaacacggtggcgtgcgggaaggggaactgcacggtgacgtcgg 271 ||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 288 taatcgggtcgatgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcgg 347 Query: 272 ggttgccggggtacaggtgcgagtgcgagccggggtggacgcagatgcacgtcagcgacg 331 |||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| Sbjct: 348 ggttcccggggtacaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgacc 407 Query: 332 agttcaggttcctgccgtgcgtcatccccaactgttcccttgatcgcacatgttctaaca 391 || ||| |||||||| ||||||||||||||||||||| |||| || ||||||||||| Sbjct: 408 aggccagcttcctgccctgcgtcatccccaactgttccattgaccgtgcatgttctaac- 466 Query: 392 atacttcagcacctgcaccggcgcttttaccaccacccaaaaatttctccctctcaccag 451 ||| |||||| ||||| |||| ||||||| |||||||||||||||||||| || ||| Sbjct: 467 --actatagcaccagcacctgcgcctttaccatcacccaaaaatttctccctcccaacag 524 Query: 452 acc 454 ||| Sbjct: 525 acc 527 Score = 202 bits (102), Expect = 2e-48 Identities = 153/170 (90%) Strand = Plus / Plus Query: 481 ggaggcacatacaagaatggcacaggtctcagttaccactgcgagtgcaaggagggtttc 540 |||||||||| ||||||||| ||||| ||||| |||||||||||||||| ||||||||| Sbjct: 693 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 752 Query: 541 agcaacctcctgaacatcacaacaatgccttgttttcagagctgttcaatcggtgcggat 600 || ||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| Sbjct: 753 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 812 Query: 601 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgc 650 ||||||||||||||| || ||||| ||||||||||||||| |||||||| Sbjct: 813 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgc 862 >emb|CT830405.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115G10, full insert sequence Length = 1376 Score = 303 bits (153), Expect = 7e-79 Identities = 257/291 (88%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 164 ccgtcgccgatgatttcttctcccccctcagccctctcctctcccctgtaatcaactcga 223 |||||||||| |||||||||||||| |||||||| |||||| ||||||||||| |||| Sbjct: 295 ccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctgtaatcgggtcga 354 Query: 224 tgtgcaacacggtggcgtgcgggaaggggaactgcacggtgacgtcggggttgccggggt 283 ||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||||||| Sbjct: 355 tgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggt 414 Query: 284 acaggtgcgagtgcgagccggggtggacgcagatgcacgtcagcgacgagttcaggttcc 343 ||||||||||||||||||| ||||||| ||||||||||||| ||||| || ||| |||| Sbjct: 415 acaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcc 474 Query: 344 tgccgtgcgtcatccccaactgttcccttgatcgcacatgttctaacaatacttcagcac 403 |||| ||||||||||||||||||||| |||| || ||||||||||| ||| ||||| Sbjct: 475 tgccctgcgtcatccccaactgttccattgaccgtgcatgttctaac---actatagcac 531 Query: 404 ctgcaccggcgcttttaccaccacccaaaaatttctccctctcaccagacc 454 | ||||| |||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 532 cagcacctgcgcctttaccatcacccaaaaatttctccctcccaacagacc 582 Score = 206 bits (104), Expect = 1e-49 Identities = 185/212 (87%) Strand = Plus / Plus Query: 481 ggaggcacatacaagaatggcacaggtctcagttaccactgcgagtgcaaggagggtttc 540 |||||||||| ||||||||| ||||| ||||| |||||||||||||||| ||||||||| Sbjct: 748 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 807 Query: 541 agcaacctcctgaacatcacaacaatgccttgttttcagagctgttcaatcggtgcggat 600 || ||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| Sbjct: 808 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 867 Query: 601 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgctccagctggc 660 ||||||||||||||| || ||||| ||||||||||||||| |||||||| ||| | || Sbjct: 868 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgcaccaccggga 927 Query: 661 tccgctagcctttctaacaacggcaatgcacc 692 || ||| || | |||||||| || |||||||| Sbjct: 928 tctgctggcatatctaacaatggtaatgcacc 959 >gb|DQ244550.1| Zea mays clone 9078 mRNA sequence Length = 1022 Score = 244 bits (123), Expect = 6e-61 Identities = 374/458 (81%), Gaps = 6/458 (1%) Strand = Plus / Plus Query: 178 ttcttctcccccctcagccctctcctctcccctgtaatcaactcgatgtgcaacacggtg 237 ||||||||||| |||||||| |||||| |||| || || ||| | ||||| ||||| Sbjct: 186 ttcttctcccctctcagccccctcctcgcccccgtcatggggtcgctatgcaaggcggtg 245 Query: 238 gcgtgcgggaaggggaactgcacggtgacgtcggggttgccggggtacaggtgcgagtgc 297 || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| Sbjct: 246 gcctgcgggaaggggaactgcacggtgacgacggggctgccggggtacaggtgcgactgc 305 Query: 298 gagccggggtggacgcagatgcacgtcagcgacgagttcaggttcctgccgtgcgtcatc 357 ||||| ||||||| ||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 306 gagcccgggtggaagcagatgcacgtcggcgacagcctcaggttcctgccctgcgtcatc 365 Query: 358 cccaactgttcccttgatcgcacatgttctaacaatacttcagcacctgcaccggcgctt 417 ||||||||| | |||||| ||||||||||||| | |||||||| || |||| |||| | Sbjct: 366 cccaactgtacaattgatcacacatgttctaacgacacttcagccccaacacccgcgcct 425 Query: 418 ttaccaccacccaaaaatttctccctctcaccagacccctgtgaaatatcatattgcggg 477 | ||||||||||| ||||| |||| || |||| ||||| || | || || || Sbjct: 426 t------cacccaaaaatgtctccgtctcggcaaacccttgtgacttagcttactgtggt 479 Query: 478 gctggaggcacatacaagaatggcacaggtctcagttaccactgcgagtgcaaggagggt 537 | || ||||||| |||||| | ||| || ||||| ||||||||||||||||||||||| Sbjct: 480 tccgggggcacatgcaagaacgccacggggctcagctaccactgcgagtgcaaggagggc 539 Query: 538 ttcagcaacctcctgaacatcacaacaatgccttgttttcagagctgttcaatcggtgcg 597 |||||||| | |||||||| || ||||||||||||||||| |||||| ||| ||| Sbjct: 540 ttcagcaatgttctgaacatgaccacaatgccttgttttcaagactgttcttacggagcg 599 Query: 598 gattgcgcaagcatagggatccttccattctcaaactc 635 ||||||||| ||| |||||| | |||| | ||||||| Sbjct: 600 gattgcgcagccatcgggatcgtaccatccacaaactc 637 >gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 196 bits (99), Expect = 1e-46 Identities = 135/147 (91%) Strand = Plus / Minus Query: 220 tcgatgtgcaacacggtggcgtgcgggaaggggaactgcacggtgacgtcggggttgccg 279 ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||| Sbjct: 132357 tcgatgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccg 132298 Query: 280 gggtacaggtgcgagtgcgagccggggtggacgcagatgcacgtcagcgacgagttcagg 339 ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| || ||| Sbjct: 132297 gggtacaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagc 132238 Query: 340 ttcctgccgtgcgtcatccccaactgt 366 |||||||| |||||||||||||||||| Sbjct: 132237 ttcctgccctgcgtcatccccaactgt 132211 Score = 119 bits (60), Expect = 2e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 481 ggaggcacatacaagaatggcacaggtctcagttaccactgcgagtgcaaggagggtttc 540 |||||||||| ||||||||| ||||| ||||| |||||||||||||||| ||||||||| Sbjct: 130823 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 130764 Query: 541 agcaacctcctgaacatcacaacaatgccttgttttcaga 580 || ||||| ||||||||||| |||||||| |||||||||| Sbjct: 130763 agtaaccttctgaacatcaccacaatgccatgttttcaga 130724 Score = 97.6 bits (49), Expect = 8e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 584 gttcaatcggtgcggattgcgcaagcatagggatccttccattctcaaactcttccaggt 643 |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct: 130635 gttcaatcggtgcggattgcgcaagcatagggctctctccatcctcaaactcttccagtt 130576 Query: 644 ctcctgctccagctggctccgctagcctttctaacaacggcaatgcacc 692 ||||||| ||| | || || ||| || | |||||||| || |||||||| Sbjct: 130575 ctcctgcaccaccgggatctgctggcatatctaacaatggtaatgcacc 130527 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 152 ccaccagagtggccgtcgccgatgatttcttctcccccctcagccctctcctctcccctg 211 ||||||| | |||||||||||| |||||||||||||| |||||||| |||||| |||||| Sbjct: 132529 ccaccagggcggccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctg 132470 Query: 212 taatc 216 ||||| Sbjct: 132469 taatc 132465