BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf029l16 (1392 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835674.1| Oryza sativa (indica cultivar-group) cDNA clone:... 440 e-120 gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome... 412 e-111 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 412 e-111 gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 182 3e-42 gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome... 125 5e-25 >emb|CT835674.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA204N16, full insert sequence Length = 2415 Score = 440 bits (222), Expect = e-120 Identities = 688/840 (81%), Gaps = 15/840 (1%) Strand = Plus / Plus Query: 268 agatggatgggaatgggatcacggcgagcgccgcgacgggggtgatggagttcgtcctcg 327 ||||||| |||||||| |||| || ||| || ||||| |||| |||| | | |||||| Sbjct: 538 agatggaggggaatggcatcatggtgagtgcggcgaccggggcgatgaactcgctcctcg 597 Query: 328 ccaagctcgccgcgctgctgggggaggagtacaagatgcacaagggcatgaagcgtgata 387 ||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| || | Sbjct: 598 ccaagctcgccgcgctgctggaggaggactaccagatgcacaaggggatgaagcgcgaga 657 Query: 388 tcaccttcctcaaggacgagctgagcagcatgaacgctctgcttgagaggctggccgaca 447 || ||||||| || || |||||||||||||||||||| || || |||||||||||||||| Sbjct: 658 tcgccttcctgaaagatgagctgagcagcatgaacgcgctcctcgagaggctggccgaca 717 Query: 448 aggaggca---cttgacccgcagacgacggagtggaggaaccaggtgagggagatgacct 504 |||||| || || |||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 718 cggaggcggcgctcgatccgcagacgaaggagtggaggagccaggtgagggagatgagct 777 Query: 505 acgacatcgaggactgcatcgacgagtacgtgcatcagctccgccacg---agccgcaga 561 | ||||| ||||||||||| ||||||||| || ||||||||||| | |||||||| Sbjct: 778 atgacattgaggactgcattgacgagtacacgcgccagctccgccatgggcggccgcaga 837 Query: 562 ggcc---tggc---ggcatcatgggattcatcattgactatgtccacaaagtaaaggagc 615 |||| |||| ||||||||||| ||| || || |||||| || || || ||||| | Sbjct: 838 ggcccggtggcaatggcatcatggggttcttccatggctatgtgcagaaggtgaaggacc 897 Query: 616 tggtagctcgccacgagattgaagagcagattcaagagatcaaggctcgcattgtcgagg 675 | || | ||| || ||||||| ||||||||||| ||| |||||||||| |||||||||| Sbjct: 898 ttgtcggtcggcatgagattgccgagcagattcaggagctcaaggctcggattgtcgagg 957 Query: 676 caagccaccgacgaaagaggtacaagcttgatgcagcggttaattctggtggcaacagtg 735 || | ||||| || ||| |||||||||||||| |||| ||||| | | | || || Sbjct: 958 caggacaccggcggaagcggtacaagcttgattcagcagttaactgtaaaagtaatcatg 1017 Query: 736 tggtgcccattgaccgtcggttgcctgcgctctatgcggagttggatggcctcgtcggta 795 | ||||| ||||| ||||||||||| ||||| | |||||||||||||| ||||| |||| Sbjct: 1018 ttgtgccaattgatcgtcggttgcccgcgctgtttgcggagttggatgctctcgttggta 1077 Query: 796 ttaatggtccgagggatgaactcatcaagtcagtggatggttgggagcagaggatgaaag 855 || | ||||||||||||| |||| |||| | |||||| | |||||||||||||||| | Sbjct: 1078 ttgaccgtccgagggatgagatcattaagttattggatgatggggagcagaggatgaagg 1137 Query: 856 tggtgtcaattgtggggcctggaggattaggcaagactactcttgctaatcaggtatacc 915 | || ||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1138 tagtttcaattgtgggttcaggaggattaggcaagaccactcttgctaatcaggtatacc 1197 Query: 916 aaaacattggagagcgatttgattgccgagcttttgtgtcgttgtcccaaaatcctgaaa 975 | || |||||||||| |||||||||| |||||||||||| |||| ||| ||||||| | Sbjct: 1198 agaaaattggagagcaatttgattgcaaagcttttgtgtccctgtcgcaacatcctgaca 1257 Query: 976 tggggatgatctttcgacccatactctctcatgtcaagagggatgagattgtcagcaccg 1035 ||| |||||||||| | ||||||||| || ||||| |||||| ||| ||| | | Sbjct: 1258 tggaaatgatctttcaaaccatactctaccaagtcaa---tgatgaggttggcagaatca 1314 Query: 1036 gatcaagtgataaggagtggctcatcaatgaattgagggatttcctaaaggacaagaggt 1095 ||||| | ||||||||| | |||||| |||| ||||||||||||| ||| ||||||||| Sbjct: 1315 gatcaggggataaggagcaggtcatcagtgaactgagggatttcctgaagaacaagaggt 1374 >gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 412 bits (208), Expect = e-111 Identities = 579/700 (82%), Gaps = 12/700 (1%) Strand = Plus / Plus Query: 268 agatggatgggaatgggatcacggcgagcgccgcgacgggggtgatggagttcgtcctcg 327 ||||||| |||||||| |||| || |||||| ||||| |||| |||| | | |||||| Sbjct: 144888 agatggaggggaatggcatcatggtgagcgcggcgaccggggcgatgaactcgctcctcg 144947 Query: 328 ccaagctcgccgcgctgctgggggaggagtacaagatgcacaagggcatgaagcgtgata 387 ||||||| ||||||||||||| |||||| ||| ||||||||||||| |||||||| || | Sbjct: 144948 ccaagcttgccgcgctgctggaggaggactaccagatgcacaaggggatgaagcgcgaga 145007 Query: 388 tcaccttcctcaaggacgagctgagcagcatgaacgctctgcttgagaggctggccgaca 447 || ||||||| || || |||||||||||||||||||| || || ||| |||||||||||| Sbjct: 145008 tcgccttcctgaaagatgagctgagcagcatgaacgcgctcctcgaggggctggccgaca 145067 Query: 448 aggaggca---cttgacccgcagacgacggagtggaggaaccaggtgagggagatgacct 504 |||||| || || |||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 145068 cggaggcgacgctcgatccgcagacgaaggagtggaggagccaggtgagggagatgagct 145127 Query: 505 acgacatcgaggactgcatcgacgagtacgtgcatcagctccgccacg---agccgcaga 561 | ||||||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 145128 atgacatcgaggactgcatcgacgagtacacgcgccagctccgccatgggcggccgcaga 145187 Query: 562 ggcc---tggc---ggcatcatgggattcatcattgactatgtccacaaagtaaaggagc 615 |||| |||| ||||||||||| ||| ||| || |||||| || || || ||||| | Sbjct: 145188 ggcccggtggcaatggcatcatggggttcttcagtggctatgtgcagaaggtgaaggacc 145247 Query: 616 tggtagctcgccacgagattgaagagcagattcaagagatcaaggctcgcattgtcgagg 675 | || | ||| || ||||||| ||||||||||| ||| |||||||||| |||||||||| Sbjct: 145248 ttgtcggtcggcatgagattgccgagcagattcaggagctcaaggctcggattgtcgagg 145307 Query: 676 caagccaccgacgaaagaggtacaagcttgatgcagcggttaattctggtggcaacagtg 735 || | || || |||||| |||||||||||||| |||| ||||| | | | || || Sbjct: 145308 caggacagcggcgaaagcggtacaagcttgattcagcagttaactgtaaaagtaatcatg 145367 Query: 736 tggtgcccattgaccgtcggttgcctgcgctctatgcggagttggatggcctcgtcggta 795 | ||||| ||||| ||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 145368 ttgtgccaattgatcgtcggttgcctgcgctgtatgcggagttggatgctctcgttggta 145427 Query: 796 ttaatggtccgagggatgaactcatcaagtcagtggatggttgggagcagaggatgaaag 855 || | |||||||||||||| |||| |||||| |||||| | |||||||||||||||| | Sbjct: 145428 ttgacggtccgagggatgagatcattaagtcattggatgatggggagcagaggatgaagg 145487 Query: 856 tggtgtcaattgtggggcctggaggattaggcaagactactcttgctaatcaggtatacc 915 | || ||||||||||| | |||||||||||||||| ||||||||||||||||| |||| Sbjct: 145488 tagtttcaattgtgggttcaggaggattaggcaagagcactcttgctaatcaggtgtacc 145547 Query: 916 aaaacattggagagcgatttgattgccgagcttttgtgtc 955 |||| || || | | |||||||||| |||||||||||| Sbjct: 145548 aaaaaatcgggaaccaatttgattgcaaagcttttgtgtc 145587 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 412 bits (208), Expect = e-111 Identities = 579/700 (82%), Gaps = 12/700 (1%) Strand = Plus / Plus Query: 268 agatggatgggaatgggatcacggcgagcgccgcgacgggggtgatggagttcgtcctcg 327 ||||||| |||||||| |||| || |||||| ||||| |||| |||| | | |||||| Sbjct: 23808850 agatggaggggaatggcatcatggtgagcgcggcgaccggggcgatgaactcgctcctcg 23808909 Query: 328 ccaagctcgccgcgctgctgggggaggagtacaagatgcacaagggcatgaagcgtgata 387 ||||||| ||||||||||||| |||||| ||| ||||||||||||| |||||||| || | Sbjct: 23808910 ccaagcttgccgcgctgctggaggaggactaccagatgcacaaggggatgaagcgcgaga 23808969 Query: 388 tcaccttcctcaaggacgagctgagcagcatgaacgctctgcttgagaggctggccgaca 447 || ||||||| || || |||||||||||||||||||| || || ||| |||||||||||| Sbjct: 23808970 tcgccttcctgaaagatgagctgagcagcatgaacgcgctcctcgaggggctggccgaca 23809029 Query: 448 aggaggca---cttgacccgcagacgacggagtggaggaaccaggtgagggagatgacct 504 |||||| || || |||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 23809030 cggaggcgacgctcgatccgcagacgaaggagtggaggagccaggtgagggagatgagct 23809089 Query: 505 acgacatcgaggactgcatcgacgagtacgtgcatcagctccgccacg---agccgcaga 561 | ||||||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 23809090 atgacatcgaggactgcatcgacgagtacacgcgccagctccgccatgggcggccgcaga 23809149 Query: 562 ggcc---tggc---ggcatcatgggattcatcattgactatgtccacaaagtaaaggagc 615 |||| |||| ||||||||||| ||| ||| || |||||| || || || ||||| | Sbjct: 23809150 ggcccggtggcaatggcatcatggggttcttcagtggctatgtgcagaaggtgaaggacc 23809209 Query: 616 tggtagctcgccacgagattgaagagcagattcaagagatcaaggctcgcattgtcgagg 675 | || | ||| || ||||||| ||||||||||| ||| |||||||||| |||||||||| Sbjct: 23809210 ttgtcggtcggcatgagattgccgagcagattcaggagctcaaggctcggattgtcgagg 23809269 Query: 676 caagccaccgacgaaagaggtacaagcttgatgcagcggttaattctggtggcaacagtg 735 || | || || |||||| |||||||||||||| |||| ||||| | | | || || Sbjct: 23809270 caggacagcggcgaaagcggtacaagcttgattcagcagttaactgtaaaagtaatcatg 23809329 Query: 736 tggtgcccattgaccgtcggttgcctgcgctctatgcggagttggatggcctcgtcggta 795 | ||||| ||||| ||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 23809330 ttgtgccaattgatcgtcggttgcctgcgctgtatgcggagttggatgctctcgttggta 23809389 Query: 796 ttaatggtccgagggatgaactcatcaagtcagtggatggttgggagcagaggatgaaag 855 || | |||||||||||||| |||| |||||| |||||| | |||||||||||||||| | Sbjct: 23809390 ttgacggtccgagggatgagatcattaagtcattggatgatggggagcagaggatgaagg 23809449 Query: 856 tggtgtcaattgtggggcctggaggattaggcaagactactcttgctaatcaggtatacc 915 | || ||||||||||| | |||||||||||||||| ||||||||||||||||| |||| Sbjct: 23809450 tagtttcaattgtgggttcaggaggattaggcaagagcactcttgctaatcaggtgtacc 23809509 Query: 916 aaaacattggagagcgatttgattgccgagcttttgtgtc 955 |||| || || | | |||||||||| |||||||||||| Sbjct: 23809510 aaaaaatcgggaaccaatttgattgcaaagcttttgtgtc 23809549 Score = 125 bits (63), Expect = 5e-25 Identities = 243/303 (80%) Strand = Plus / Plus Query: 405 gagctgagcagcatgaacgctctgcttgagaggctggccgacaaggaggcacttgacccg 464 ||||||||| ||||||| |||||||| |||| ||||||| || ||||| |||||||| Sbjct: 23813961 gagctgagctgcatgaatgctctgctggagaaactggccggcatggaggtgcttgacccc 23814020 Query: 465 cagacgacggagtggaggaaccaggtgagggagatgacctacgacatcgaggactgcatc 524 |||| | ||||||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 23814021 cagatggaggagtggaggaaccaagtgagggagatggcctacgacatcgaggattgcatc 23814080 Query: 525 gacgagtacgtgcatcagctccgccacgagccgcagaggcctggcggcatcatgggattc 584 ||| |||| | | ||||| | | ||||||| ||||| ||| || || |||||||| Sbjct: 23814081 gacaggtacatctaccagctacactacgagccacagagacctactggaattgtgggattc 23814140 Query: 585 atcattgactatgtccacaaagtaaaggagctggtagctcgccacgagattgaagagcag 644 || ||||||||| ||||| || ||||||||| ||||||| | |||| | | ||||| Sbjct: 23814141 ttccatgactatgttcacaaggtgaaggagctgctagctcgacgcgaggtcgctcagcag 23814200 Query: 645 attcaagagatcaaggctcgcattgtcgaggcaagccaccgacgaaagaggtacaagctt 704 || ||| |||||| | |||||| |||||||||||| || | |||||||||||| || Sbjct: 23814201 ataaaagttctcaaggatgacattgttgaggcaagccacagaaggaagaggtacaagatt 23814260 Query: 705 gat 707 ||| Sbjct: 23814261 gat 23814263 >gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 182 bits (92), Expect = 3e-42 Identities = 377/472 (79%) Strand = Plus / Plus Query: 624 cgccacgagattgaagagcagattcaagagatcaaggctcgcattgtcgaggcaagccac 683 ||||| ||||||| ||||||||||| ||| |||||||||| ||||| |||| | ||| Sbjct: 152053 cgccatgagattgccgagcagattcaggagctcaaggctcgaattgttgaggtgggacac 152112 Query: 684 cgacgaaagaggtacaagcttgatgcagcggttaattctggtggcaacagtgtggtgccc 743 || | |||||||||||| |||||| | ||||||| |||||||| || |||| | || Sbjct: 152113 agaaggaagaggtacaagattgatgatacagttaattttggtggcaccaatgtgatccct 152172 Query: 744 attgaccgtcggttgcctgcgctctatgcggagttggatggcctcgtcggtattaatggt 803 |||||||||||||||| || |||||||| || |||| |||||| || ||||| | || | Sbjct: 152173 gttgaccgtcggttgccagcactctatgcagaattgggtggccttgttggtatcagtgtt 152232 Query: 804 ccgagggatgaactcatcaagtcagtggatggttgggagcagaggatgaaagtggtgtca 863 || || ||||| |||||||| ||| |||| | ||| |||| || | || |||||||| Sbjct: 152233 cccagagatgaggtcatcaagctagttgatgatggggcgcagggggtaaaggtggtgtct 152292 Query: 864 attgtggggcctggaggattaggcaagactactcttgctaatcaggtataccaaaacatt 923 |||||||| ||||||| | || ||||||||| |||| ||||| || ||| ||||||| Sbjct: 152293 attgtgggttgtggaggactgggaaagactactattgcgaatcaagtttacataaacatt 152352 Query: 924 ggagagcgatttgattgccgagcttttgtgtcgttgtcccaaaatcctgaaatggggatg 983 | ||| ||||||||||| |||||||||||| || ||||||||||||| |||| ||| Sbjct: 152353 gctgagaaatttgattgccaagcttttgtgtccttaacccaaaatcctgatatggtgatc 152412 Query: 984 atctttcgacccatactctctcatgtcaagagggatgagattgtcagcaccggatcaagt 1043 || |||| | ||||||| |||| ||||||| ||||||| || |||||| | ||| || Sbjct: 152413 atatttcaatccatactgactcaagtcaagaaggatgagtgtgatagcaccagctcatgt 152472 Query: 1044 gataaggagtggctcatcaatgaattgagggatttcctaaaggacaagaggt 1095 || ||||| ||||| | |||||||||||||||||||||||||||||||| Sbjct: 152473 gacaaggaacttctcattagtgaattgagggatttcctaaaggacaagaggt 152524 Score = 149 bits (75), Expect = 4e-32 Identities = 162/191 (84%) Strand = Plus / Plus Query: 327 gccaagctcgccgcgctgctgggggaggagtacaagatgcacaagggcatgaagcgtgat 386 ||||||||||||| |||||| |||||||| || || ||||| | ||||||| |||||| Sbjct: 151756 gccaagctcgccgagctgctcggggaggactataatatgcagagaggcatgaggcgtgag 151815 Query: 387 atcaccttcctcaaggacgagctgagcagcatgaacgctctgcttgagaggctggccgac 446 ||| ||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| Sbjct: 151816 atcgccttcctcaaggatgagctgagcagcatgaacacgttgcttgagaggctagccgac 151875 Query: 447 aaggaggcacttgacccgcagacgacggagtggaggaaccaggtgagggagatgacctac 506 |||| || || | |||||||| |||||||||| |||||||||||||||||| ||| Sbjct: 151876 tcggagatgctcgatctgcagacgaaggagtggagggaccaggtgagggagatgagctat 151935 Query: 507 gacatcgagga 517 ||||| ||||| Sbjct: 151936 gacattgagga 151946 >gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 125 bits (63), Expect = 5e-25 Identities = 243/303 (80%) Strand = Plus / Plus Query: 405 gagctgagcagcatgaacgctctgcttgagaggctggccgacaaggaggcacttgacccg 464 ||||||||| ||||||| |||||||| |||| ||||||| || ||||| |||||||| Sbjct: 2776 gagctgagctgcatgaatgctctgctggagaaactggccggcatggaggtgcttgacccc 2835 Query: 465 cagacgacggagtggaggaaccaggtgagggagatgacctacgacatcgaggactgcatc 524 |||| | ||||||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 2836 cagatggaggagtggaggaaccaagtgagggagatggcctacgacatcgaggattgcatc 2895 Query: 525 gacgagtacgtgcatcagctccgccacgagccgcagaggcctggcggcatcatgggattc 584 ||| |||| | | ||||| | | ||||||| ||||| ||| || || |||||||| Sbjct: 2896 gacaggtacatctaccagctacactacgagccacagagacctactggaattgtgggattc 2955 Query: 585 atcattgactatgtccacaaagtaaaggagctggtagctcgccacgagattgaagagcag 644 || ||||||||| ||||| || ||||||||| ||||||| | |||| | | ||||| Sbjct: 2956 ttccatgactatgttcacaaggtgaaggagctgctagctcgacgcgaggtcgctcagcag 3015 Query: 645 attcaagagatcaaggctcgcattgtcgaggcaagccaccgacgaaagaggtacaagctt 704 || ||| |||||| | |||||| |||||||||||| || | |||||||||||| || Sbjct: 3016 ataaaagttctcaaggatgacattgttgaggcaagccacagaaggaagaggtacaagatt 3075 Query: 705 gat 707 ||| Sbjct: 3076 gat 3078