BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf029b16 (1009 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243479.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 371 4e-99 gb|AY105253.1| Zea mays PCO131351 mRNA sequence 353 9e-94 emb|CT830543.1| Oryza sativa (indica cultivar-group) cDNA clone:... 343 8e-91 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 264 6e-67 emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 264 6e-67 >dbj|AK243479.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100072M24, full insert sequence Length = 1146 Score = 371 bits (187), Expect = 4e-99 Identities = 291/325 (89%), Gaps = 3/325 (0%) Strand = Plus / Plus Query: 184 cttcctacagagggcaaggaggacaacaatcttactgaagacaacgttgacctacggttc 243 ||||||||||||| || ||| |||| |||||||||||| || |||||||| |||||| Sbjct: 321 cttcctacagaggacagggatgacagcaatcttactgatgat---gttgaccttcggttc 377 Query: 244 acttacactccaaaatccttgaggaagatcccgtggaagtcaattgccctagcattgttc 303 |||||||| ||||||||| | ||||| ||||||||||||||||||||||| ||| | ||| Sbjct: 378 acttacaccccaaaatccctcaggaaaatcccgtggaagtcaattgccctggcactattc 437 Query: 304 ctgctcctcctaggaagttctgttctcttcctttcatattttatattcacaggtcacatg 363 || |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 438 ctcctcctcctaggatgttcgcttctcttcctgtcatattttatattcacaggtcacatg 497 Query: 364 gagggtgatagctctcaggcatatggtctcttgttcctgggtttccttgcctttcttcct 423 ||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 498 gagggggataactctcaggcatatggtctcttgttcctgggcatccttgccttccttcct 557 Query: 424 ggtttttatgagactcgggttgcttactattcatggagaggagcaccagggtacaccttt 483 ||||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| Sbjct: 558 ggtttttatgagactcgagttgcttactattcctcgagaggagcaccagggtataccttt 617 Query: 484 gcatccatcccagattattagcctt 508 ||||| || ||||||||||| |||| Sbjct: 618 gcatctattccagattattaacctt 642 >gb|AY105253.1| Zea mays PCO131351 mRNA sequence Length = 808 Score = 353 bits (178), Expect = 9e-94 Identities = 316/362 (87%) Strand = Plus / Plus Query: 148 agtatggcggcaagacgtaatgttcgatattctgctcttcctacagagggcaaggaggac 207 ||||||||||||||||| |||||||| || || |||||||| |||||| | ||| | | Sbjct: 270 agtatggcggcaagacgcaatgttcggtactcgcctcttccttcagaggacggggatggc 329 Query: 208 aacaatcttactgaagacaacgttgacctacggttcacttacactccaaaatccttgagg 267 | |||| ||| | |||| | ||||||| || | |||||||||||||||||| | || Sbjct: 330 agcaattttattaaagaagatattgacctccgatacacttacactccaaaatcgtacaga 389 Query: 268 aagatcccgtggaagtcaattgccctagcattgttcctgctcctcctaggaagttctgtt 327 | |||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||| || Sbjct: 390 aggatcccatggaagtcaattgccctggcattgttcctcctcctcctaggaacttcactt 449 Query: 328 ctcttcctttcatattttatattcacaggtcacatggagggtgatagctctcaggcatat 387 ||||| ||||| || || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 450 ctctttctttcttacttcatattcacaggtcacatggagggtgatagttctcaggcatat 509 Query: 388 ggtctcttgttcctgggtttccttgcctttcttcctggtttttatgagactcgggttgct 447 |||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 510 ggtctcttgttcctgggtttcctttcctttcttcctggtttctacgagactcgagttgct 569 Query: 448 tactattcatggagaggagcaccagggtacacctttgcatccatcccagattattagcct 507 |||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 570 tactattcatggcggggagcaccagggtacacttttgcatccataccagattattagcct 629 Query: 508 tt 509 || Sbjct: 630 tt 631 >emb|CT830543.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009K01, full insert sequence Length = 992 Score = 343 bits (173), Expect = 8e-91 Identities = 289/327 (88%), Gaps = 3/327 (0%) Strand = Plus / Plus Query: 182 ctcttcctacagagggcaaggaggacaacaatcttactgaagacaacgttgacctacggt 241 ||||||||||||||| || ||| |||| ||| |||||||| || || ||||| |||| Sbjct: 264 ctcttcctacagaggacagggatgacagcaaccttactgatgat---gtagaccttcggt 320 Query: 242 tcacttacactccaaaatccttgaggaagatcccgtggaagtcaattgccctagcattgt 301 |||||||||| ||||||||| | || || ||||||||||||||||||||||| ||| | | Sbjct: 321 tcacttacaccccaaaatccctcagaaaaatcccgtggaagtcaattgccctggcactat 380 Query: 302 tcctgctcctcctaggaagttctgttctcttcctttcatattttatattcacaggtcaca 361 |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 381 tcctcctcctcctaggatgttctcttctcttcctgtcatattttatattcacaggtcaca 440 Query: 362 tggagggtgatagctctcaggcatatggtctcttgttcctgggtttccttgcctttcttc 421 ||||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||| Sbjct: 441 tggagggggataactctcaggtatatggtctcttgttcctgggcatccttgccttccttc 500 Query: 422 ctggtttttatgagactcgggttgcttactattcatggagaggagcaccagggtacacct 481 ||||||||||||||||||| |||||||||||||| | |||||| |||||||| ||||||| Sbjct: 501 ctggtttttatgagactcgagttgcttactattcctcgagaggggcaccaggatacacct 560 Query: 482 ttgcatccatcccagattattagcctt 508 ||||||| || ||||||||||| |||| Sbjct: 561 ttgcatctattccagattattaacctt 587 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 264 bits (133), Expect = 6e-67 Identities = 216/243 (88%), Gaps = 3/243 (1%) Strand = Plus / Minus Query: 184 cttcctacagagggcaaggaggacaacaatcttactgaagacaacgttgacctacggttc 243 ||||||||||||| || ||| |||| |||||||||||| || |||||||| |||||| Sbjct: 1387769 cttcctacagaggacagggatgacagcaatcttactgatgat---gttgaccttcggttc 1387713 Query: 244 acttacactccaaaatccttgaggaagatcccgtggaagtcaattgccctagcattgttc 303 |||||||| ||||||||| | ||||| ||||||||||||||||||||||| ||| | ||| Sbjct: 1387712 acttacaccccaaaatccctcaggaaaatcccgtggaagtcaattgccctggcactattc 1387653 Query: 304 ctgctcctcctaggaagttctgttctcttcctttcatattttatattcacaggtcacatg 363 || |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 1387652 ctcctcctcctaggatgttcgcttctcttcctgtcatattttatattcacaggtcacatg 1387593 Query: 364 gagggtgatagctctcaggcatatggtctcttgttcctgggtttccttgcctttcttcct 423 ||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 1387592 gagggggataactctcaggcatatggtctcttgttcctgggcatccttgccttccttcct 1387533 Query: 424 ggt 426 ||| Sbjct: 1387532 ggt 1387530 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 424 ggtttttatgagactcgggttgcttactattcatggagaggagcaccagggtacaccttt 483 ||||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| Sbjct: 1387138 ggtttttatgagactcgagttgcttactattcctcgagaggagcaccagggtataccttt 1387079 Query: 484 gcatccatcccagattattagcctt 508 ||||| || ||||||||||| |||| Sbjct: 1387078 gcatctattccagattattaacctt 1387054 >emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 264 bits (133), Expect = 6e-67 Identities = 216/243 (88%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 184 cttcctacagagggcaaggaggacaacaatcttactgaagacaacgttgacctacggttc 243 ||||||||||||| || ||| |||| |||||||||||| || |||||||| |||||| Sbjct: 41400 cttcctacagaggacagggatgacagcaatcttactgatgat---gttgaccttcggttc 41456 Query: 244 acttacactccaaaatccttgaggaagatcccgtggaagtcaattgccctagcattgttc 303 |||||||| ||||||||| | ||||| ||||||||||||||||||||||| ||| | ||| Sbjct: 41457 acttacaccccaaaatccctcaggaaaatcccgtggaagtcaattgccctggcactattc 41516 Query: 304 ctgctcctcctaggaagttctgttctcttcctttcatattttatattcacaggtcacatg 363 || |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 41517 ctcctcctcctaggatgttcgcttctcttcctgtcatattttatattcacaggtcacatg 41576 Query: 364 gagggtgatagctctcaggcatatggtctcttgttcctgggtttccttgcctttcttcct 423 ||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 41577 gagggggataactctcaggcatatggtctcttgttcctgggcatccttgccttccttcct 41636 Query: 424 ggt 426 ||| Sbjct: 41637 ggt 41639 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Plus Query: 424 ggtttttatgagactcgggttgcttactattcatggagaggagcaccagggtacaccttt 483 ||||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| Sbjct: 42031 ggtttttatgagactcgagttgcttactattcctcgagaggagcaccagggtataccttt 42090 Query: 484 gcatccatcccagattattagcctt 508 ||||| || ||||||||||| |||| Sbjct: 42091 gcatctattccagattattaacctt 42115